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J Virol. 2004 Jul;78(14):7311-8.

Characterization of a unique group-specific protein (U122) of the severe acute respiratory syndrome coronavirus.

Author information

1
Collaborative Anti-Viral Research Group, Institute of Molecular and Cell Biology, Singapore 117609, Republic of Singapore.

Abstract

A novel coronavirus (CoV) has been identified as the etiological agent of severe acute respiratory syndrome (SARS). The SARS-CoV genome encodes the characteristic essential CoV replication and structural proteins. Additionally, the genome contains six group-specific open reading frames (ORFs) larger than 50 amino acids, with no known homologues. As with the group-specific genes of the other CoVs, little is known about the SARS-CoV group-specific genes. SARS-CoV ORF7a encodes a putative unique 122-amino-acid protein, designated U122 in this study. The deduced sequence contains a probable cleaved signal sequence and a C-terminal transmembrane helix, indicating that U122 is likely to be a type I membrane protein. The C-terminal tail also contains a typical endoplasmic reticulum (ER) retrieval motif, KRKTE. U122 was expressed in SARS-CoV-infected Vero E6 cells, as it could be detected by Western blot and immunofluorescence analyses. U122 is localized to the perinuclear region of both SARS-CoV-infected and transfected cells and colocalized with ER and intermediate compartment markers. Mutational analyses showed that both the signal peptide sequence and ER retrieval motif were functional.

PMID:
15220404
PMCID:
PMC434096
DOI:
10.1128/JVI.78.14.7311-7318.2004
[Indexed for MEDLINE]
Free PMC Article

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