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Bioinformatics. 2004 Nov 1;20(16):2869-71. Epub 2004 May 14.

ClutrFree: cluster tree visualization and interpretation.

Author information

1
Division of Population Science, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA.

Abstract

ClutrFree facilitates the visualization and interpretation of clusters or patterns computed from microarray data through a graphical user interface that displays patterns, membership information of the genes and annotation statistics simultaneously. ClutrFree creates a tree linking the patterns based on similarity, permitting the navigation among patterns identified by different algorithms or by the same algorithm with different parameters, and aids the inferring of conclusions from a microarray experiment.

AVAILABILITY:

The ClutrFree Java source code and compiled bytecode are available as a package under the GNU General Public License at http://bioinformatics.fccc.edu

PMID:
15145813
DOI:
10.1093/bioinformatics/bth307
[Indexed for MEDLINE]

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