(A) Schematic representation of the 16S-23S region of wild-type tobacco chloroplast genome. The BamHI/BglII restriction fragment, P1, was used as a probe to investigate homoplasmy. The ApaI restriction fragment, P2, was used as a probe to detect 16S rRNA transcript levels in Northern analysis. Also shown are transgenic chloroplast genomes harboring pLDADg10RbcS(B) or pLDADpsbARbcS (C) as well as the annealing positions of primers 3P/3M and 5P/2M and expected amplicon sizes. (D) PCR analysis with primer pair 3P/3M. Lane M, 1-kb DNA ladder; lanes 1 and 2, untransformed; lanes 3 and 4, Nt-pLDADg10RbcS; lanes 5 and 6, Nt-LDADpsbARbcS. (E) PCR analysis with primer pair 5P/2M. Lane M, 1-kb DNA ladder; lanes 1 and 2, untransformed; lanes 3 and 4, Nt-pLDADg10RbcS; lanes 5 and 6, Nt-pLDADpsbARbcS. (F) Southern blot analysis. Total DNA was digested with SmaI and probed with a radiolabeled BglII/BamHI fragment, P1. WT, untransformed; lanes 1 and 2, Nt-pLDADg10RbcS; lanes 3 and 4, Nt-pLDADpsbARbcS. (G) Southern blot analysis. Total DNA was probed with RbcS. Nt-pLDADg10RbcS was digested with XbaI (lanes 1 and 2) and Nt-pLDADpsbARbcS was probed with SpeI (lanes 3 and 4).