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Bioinformatics. 2003 Aug 12;19(12):1572-4.

MrBayes 3: Bayesian phylogenetic inference under mixed models.

Author information

1
Department of Systematic Zoology, Evolutionary Biology Centre, Uppsala University, Norbyv. 18D, SE-752 36 Uppsala, Sweden. fredrik.ronquist@ebc.uu.se

Abstract

MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models. This allows the user to analyze heterogeneous data sets consisting of different data types-e.g. morphological, nucleotide, and protein-and to explore a wide variety of structured models mixing partition-unique and shared parameters. The program employs MPI to parallelize Metropolis coupling on Macintosh or UNIX clusters.

PMID:
12912839
[Indexed for MEDLINE]

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