Format

Send to

Choose Destination
Nucleic Acids Res. 2003 Jul 1;31(13):3593-6.

Regulatory sequence analysis tools.

Author information

1
Service de Conformation des Macromolécules Biologiques et de Bioinformatique, Université Libre de Bruxelles, Campus Plaine, CP 263, Bld du Triomphe, B-1050 Bruxelles, Belgium. jacques.van.helden@ulb.ac.be

Abstract

The web resource Regulatory Sequence Analysis Tools (RSAT) (http://rsat.ulb.ac.be/rsat) offers a collection of software tools dedicated to the prediction of regulatory sites in non-coding DNA sequences. These tools include sequence retrieval, pattern discovery, pattern matching, genome-scale pattern matching, feature-map drawing, random sequence generation and other utilities. Alternative formats are supported for the representation of regulatory motifs (strings or position-specific scoring matrices) and several algorithms are proposed for pattern discovery. RSAT currently holds >100 fully sequenced genomes and these data are regularly updated from GenBank.

PMID:
12824373
PMCID:
PMC168973
DOI:
10.1093/nar/gkg567
[Indexed for MEDLINE]
Free PMC Article

Supplemental Content

Full text links

Icon for Silverchair Information Systems Icon for PubMed Central
Loading ...
Support Center