The molecular chaperone DnaK is not recruited to translating ribosomes that lack trigger factor

Arch Biochem Biophys. 2002 Jul 1;403(1):63-70. doi: 10.1016/S0003-9861(02)00213-8.

Abstract

The molecular chaperone DnaK and trigger factor (TF), a ribosome-associated protein with folding activity, have been implicated in assisting nascent polypeptides to acquire a three-dimensional structure on Escherichia coli ribosomes. We asked whether ribosomes that lack trigger factor would recruit DnaK for synthesis and folding of nascent peptides. For these analyses, translating ribosomes with a homogeneous population of nascent peptides were isolated. Truncated forms of rhodanese and E. coli translation initiation factor 3 (IF3) were generated with tandem rare arginine codons in the coding sequence. These codons cause strong translational pausing during coupled transcription/translation in E. coli extracts, generating nascent polypeptides on ribosomes. Protein synthesis in the TF(-) extract was initiated with biotin-Met-tRNA(f). Ribosomes with nascent polypeptides were isolated by interaction of the N-terminal biotin with streptavidin on magnetobeads. These translating ribosomes that lack TF contain the molecular chaperone DnaK in considerably less than stoichiometric amounts.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Arginine / metabolism
  • Blotting, Western
  • Cell-Free System
  • Electrophoresis, Polyacrylamide Gel
  • Escherichia coli / metabolism
  • Escherichia coli Proteins*
  • HSP70 Heat-Shock Proteins / metabolism*
  • Peptide Initiation Factors / metabolism
  • Peptides / chemistry
  • Plasmids / metabolism
  • Prokaryotic Initiation Factor-3
  • Protein Biosynthesis
  • Protein Structure, Tertiary
  • Ribosomes / metabolism*
  • Streptavidin / pharmacology
  • Thiosulfate Sulfurtransferase / metabolism
  • Transcription, Genetic

Substances

  • Escherichia coli Proteins
  • HSP70 Heat-Shock Proteins
  • Peptide Initiation Factors
  • Peptides
  • Prokaryotic Initiation Factor-3
  • Streptavidin
  • Arginine
  • Thiosulfate Sulfurtransferase
  • dnaK protein, E coli