Light-associated and processing-dependent protein binding to 5' regions of rbcL mRNA in the chloroplasts of a C4 plant

J Biol Chem. 2001 Feb 2;276(5):3476-83. doi: 10.1074/jbc.M009236200. Epub 2000 Nov 13.

Abstract

In amaranth, a C(4) dicotyledonous plant, the plastid rbcL gene (encoding the large subunit of ribulose-1,5-bisphosphate carboxylase) is regulated post-transcriptionally during many developmental processes, including light-mediated development. To identify post-transcriptional regulators of rbcL expression, three types of analyses (polysome heel printing, gel retardation, and UV cross-linking) were utilized. These approaches revealed that multiple proteins interact with 5' regions of rbcL mRNA in light-grown, but not etiolated, amaranth plants. Light-associated binding of a 47-kDa protein (p47), observed by UV cross-linking, was highly specific for the rbcL 5' RNA. Binding of p47 occurred only with RNAs corresponding to mature processed rbcL transcripts (5'-untranslated region (UTR) terminating at -66); transcripts with longer 5'-UTRs did not associate with p47 in vitro. Variations in the length of the rbcL 5'-UTR were found to occur in vivo, and these different 5' termini may prevent or enhance light-associated p47 binding, possibly affecting rbcL expression as well. p47 binding correlates with light-dependent rbcL polysome association of the fully processed transcripts in photosynthetic leaves and cotyledons but not with cell-specific rbcL mRNA accumulation in bundle sheath and mesophyll chloroplasts.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions / chemistry
  • 5' Untranslated Regions / metabolism*
  • 5' Untranslated Regions / radiation effects
  • Blood Proteins / metabolism
  • Blood Proteins / physiology*
  • Chloroplasts / genetics
  • Chloroplasts / metabolism*
  • Gene Expression Regulation, Plant / radiation effects
  • Light
  • Magnoliopsida / genetics
  • Magnoliopsida / metabolism*
  • Phosphoproteins / metabolism
  • Phosphoproteins / physiology*
  • Plant Proteins / genetics
  • Plant Proteins / metabolism*
  • Plant Proteins / radiation effects
  • Polyribosomes / metabolism
  • RNA, Messenger / metabolism
  • RNA, Messenger / radiation effects
  • RNA-Binding Proteins / isolation & purification
  • RNA-Binding Proteins / metabolism
  • Ribulose-Bisphosphate Carboxylase*
  • Ultraviolet Rays

Substances

  • 5' Untranslated Regions
  • Blood Proteins
  • Phosphoproteins
  • Plant Proteins
  • RNA, Messenger
  • RNA-Binding Proteins
  • platelet protein P47
  • RbcL protein, plastid
  • Ribulose-Bisphosphate Carboxylase