Human CC chemokine I-309, structural consequences of the additional disulfide bond

Biochemistry. 2000 May 23;39(20):6053-9. doi: 10.1021/bi000089l.

Abstract

I-309 is a member of the CC subclass of chemokines and is one of only three human chemokines known to contain an additional, third disulfide bond. The three-dimensional solution structure of I-309 was determined by (1)H nuclear magnetic resonance spectroscopy and dynamic simulated annealing. The structure of I-309, which remains monomeric at high concentrations, was determined on the basis of 978 experimental restraints. The N-terminal region of I-309 was disordered, as has been previously observed for the CC chemokine eotaxin but not others such as MCP-1 and RANTES. This was followed in I-309 by a well-ordered region between residues 13 and 69 that consisted of a 3(10)-helix, a triple-stranded antiparallel beta-sheet, and finally a C-terminal alpha-helix. Root-mean-square deviations of 0.61 and 1.16 were observed for the backbone and heavy atoms, respectively. A comparison of I-309 to eotaxin and HCC-2 revealed a significant structural change in the C-terminal region of the protein. The alpha-helix normally present in chemokines was terminated early and was followed by a short section of extended strand. These changes were a direct result of the additional disulfide bond present in this protein. An examination of the I-309 structure will aid in an understanding of the specificity of this protein with its receptor, CCR8.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Chemokine CCL1
  • Chemokines, CC / chemistry*
  • Crystallography, X-Ray
  • Dimerization
  • Disulfides / chemistry*
  • Humans
  • Macrophage Inflammatory Proteins
  • Models, Molecular
  • Molecular Sequence Data
  • Monokines*
  • Nuclear Magnetic Resonance, Biomolecular
  • Peptide Fragments / chemistry
  • Protein Structure, Secondary
  • Solutions
  • Structure-Activity Relationship

Substances

  • CCL1 protein, human
  • CCL15 protein, human
  • Chemokine CCL1
  • Chemokines, CC
  • Disulfides
  • Macrophage Inflammatory Proteins
  • Monokines
  • Peptide Fragments
  • Solutions

Associated data

  • PDB/1ELO