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Items: 1 to 20 of 41

1.

DAN domain

This domain contains 9 conserved cysteines and is extracellular. Therefore the cysteines may form disulphide bridges. This family of proteins has been termed the DAN family [1] after the first member to be reported. This family includes DAN, Cerberus and Gremlin. The gremlin protein is an antagonist of bone morphogenetic protein signaling. It is postulated that all members of this family antagonise different TGF beta Pfam:PF00019 ligands [1]. Recent work shows that the DAN protein is not an efficient antagonist of BMP-2/4 class signals, we found that DAN was able to interact with GDF-5 in a frog embryo assay, suggesting that DAN may regulate signaling by the GDF-5/6/7 class of BMPs in vivo [2]. (from Pfam)

Date:
2023-12-12
Family Accession:
NF015034.4
Method:
HMM
2.

Hepatitis C virus core protein

The viral core protein forms the internal viral coat that encapsidates the genomic RNA and is enveloped in a host cell-derived lipid membrane. The core protein has been shown, by yeast two-hybrid assay to interact with cellular DEAD box helicases [1]. The N terminus of the core protein is involved in transcriptional repression [2]. (from Pfam)

GO Terms:
Molecular Function:
structural molecule activity (GO:0005198)
Date:
2023-12-12
Family Accession:
NF013692.4
Method:
HMM
3.

NUDIX hydrolase

NUDIX hydrolase catalyzes the hydrolysis of nucleoside diphosphates linked to other moieties (X); it requires a divalent cation, such as Mg2+ or Mn2+ for its activity; similar to nucleoside triphosphatase YtkD

GO Terms:
Molecular Function:
metal ion binding (GO:0046872)
Date:
2022-08-10
Family Accession:
1005679
Method:
Sparcle
4.

germin family protein

germin family protein is a cupin domain-containing protein similar to oxalate oxidase (also called germin) that catalyzes the manganese-dependent oxidative decarboxylation of oxalate to carbon dioxide and hydrogen peroxide

Date:
2020-02-24
Family Accession:
14388826
Method:
Sparcle
5.

UBA_FAF2 and Thioredoxin_like domain-containing protein

protein containing domains UBA_FAF2, Thioredoxin_like, and Ubiquitin_like_fold

Date:
2019-03-21
Family Accession:
12997376
Method:
Sparcle
6.

UBA_FAF2 and UAS_ETEA domain-containing protein

protein containing domains UBA_FAF2, UAS_ETEA, and Ubiquitin_like_fold

Date:
2019-03-21
Family Accession:
12997369
Method:
Sparcle
7.

FAS-associated factor 2

FAS-associated factor 2 (FAF2) plays an important role in endoplasmic reticulum-associated degradation (ERAD) that mediates ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins

GO Terms:
Molecular Function:
ubiquitin binding (GO:0043130)
Biological Process:
ubiquitin-dependent ERAD pathway (GO:0030433)
Biological Process:
response to unfolded protein (GO:0006986)
Molecular Function:
ubiquitin protein ligase binding (GO:0031625)
Date:
2023-05-11
Family Accession:
12997366
Method:
Sparcle
8.

UBA_FAF2 and UBX_UBXN3B domain-containing protein

protein containing domains UBA_FAF2, Thioredoxin_like, and UBX_UBXN3B

Date:
2019-03-21
Family Accession:
12997373
Method:
Sparcle
9.

UBA and UBX domain-containing protein

UBA (ubiquitin-associated) and UBX domain-containing protein binds ubiquitin and may participate in the regulation of protein degradation; also contains a UAS domain

GO Terms:
Molecular Function:
ubiquitin binding (GO:0043130)
Date:
2022-06-06
Family Accession:
13194621
Method:
Sparcle
10.

Thioredoxin_like and UBX_UBXN3B domain-containing protein

Thioredoxin_like and UBX_UBXN3B domain-containing protein

Date:
2019-03-21
Family Accession:
13051570
Method:
Sparcle
11.

HCV_capsid and HCV_core domain-containing protein

protein containing domains HCV_capsid, HCV_core, and HCV_env

Date:
2019-03-21
Family Accession:
10479869
Method:
Sparcle
12.

HCV_capsid and HCV_env domain-containing protein

protein containing domains HCV_capsid, HCV_core, and HCV_env

Date:
2017-03-02
Family Accession:
10479864
Method:
Sparcle
13.

HCV_capsid and HCV_NS1 domain-containing protein

protein containing domains HCV_capsid, HCV_core, HCV_env, and HCV_NS1

Date:
2017-03-02
Family Accession:
10479865
Method:
Sparcle
14.

SAND and SAM_Samd7,11 domain-containing protein

protein containing domains SAND, ROM1, and SAM_Samd7,11

Date:
2017-03-02
Family Accession:
10474443
Method:
Sparcle
15.

capsid and core domain-containing protein

hepatitis C virus capsid and core domain-containing protein, which forms the internal viral coat that encapsidates the genomic RNA and is enveloped in a host cell-derived lipid membrane

Date:
2020-12-14
Family Accession:
10479863
Method:
Sparcle
16.

SAND and SAM_superfamily domain-containing protein

SAND and SAM_superfamily domain-containing protein

Date:
2017-03-02
Family Accession:
10474461
Method:
Sparcle
17.

plant UBX domain-containing protein 10

plant UBX domain-containing protein 10 (PUX10) is involved in a protein degradation pathway at lipid droplets, mediating an interaction between polyubiquitinated proteins targeted for degradation and downstream effectors such as CDC48

GO Terms:
Molecular Function:
ubiquitin binding (GO:0043130)
Date:
2022-06-06
Family Accession:
10884634
Method:
Sparcle
18.

UBA_FAF and UAS domain-containing protein

UBA_FAF and UAS domain-containing protein

Date:
2019-03-21
Family Accession:
10884627
Method:
Sparcle
19.

PKc_like and MYSc_Myo3 domain-containing protein

protein containing domains PKc_like, MYSc_Myo3, and PTZ00121

Date:
2019-03-21
Family Accession:
13135324
Method:
Sparcle
20.

nudix_YtkD family protein

nudix_YtkD family protein

Date:
2017-03-02
Family Accession:
11494933
Method:
Sparcle
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