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   Homo sapiens Genome: Statistics  --  Build 37.2

Summary of the GenBank source sequences, the scaffolds, and the features annotated on the sequence based on sequence information available on Dec 14, 2010. Also summarizes the objects on each non-sequence-based map in the MapViewer.

These statistics are based on the assembly and annotation process documented here.


ResourceScope
CytogeneticsA cytogenetic resource of FISH-mapped, sequence-tagged clones
dbSNPDatabase of SNPs and other genetic variation
Entrez GeneFocal point for genes and associated information
RefSeqReference Sequence collection: genomic DNA, transcripts, and proteins
UniGeneNon-redundant gene-oriented clusters
UniSTSSTS markers


  GenBank Source Sequences back to top
Sequence type Number used Length Total
HTG Phase 1
HTG Phase 2141.22263x106
HTG Phase 3267123.07612x109
WGS266860613.10608x109

  Framework Assemblies back to top
Number of scaffolds generated190
Genome Length3,101,804,739

Scaffolds categorized by type of source sequence (placed scaffolds only) back to top
Type of source sequenceNumber usedLength (bp)
Draft only
Finished only1351,156,520,000
Draft and Finished1351,156,520,000

Scaffolds categorized by size (placed scaffolds only) back to top

Range (kb) Number Length (bp) % total
< 300 37 5,818,180 0.2
300 – 1000 39 23,660,700 0.82
1000 – 5000 32 79,778,700 2.78
> 5000 82 2,757,100,000 96.18

  N50 Scaffold Length (Kb) back to top
GRCh37.p2-Primary Assembly  All  46,396
Mapped  46,396
Hs_Celera-Primary Assembly  All  33,349
Mapped  33,349
HuRef-Primary Assembly  All  17,664
Mapped  17,737
CRA_TCAGchr7v2-Primary Assembly  All  58,008
Mapped  58,008
GRCh37.p2-ALT_REF_LOCI_1  All  4,622
Mapped  4,622
GRCh37.p2-ALT_REF_LOCI_2  All  4,795
Mapped  4,795
GRCh37.p2-ALT_REF_LOCI_3  All  4,610
Mapped  4,610
GRCh37.p2-ALT_REF_LOCI_4  All  4,683
Mapped  4,683
GRCh37.p2-ALT_REF_LOCI_5  All  4,833
Mapped  4,833
GRCh37.p2-ALT_REF_LOCI_6  All  4,612
Mapped  4,612
GRCh37.p2-ALT_REF_LOCI_7  All  4,929
Mapped  4,929
GRCh37.p2-ALT_REF_LOCI_8  All  590
Mapped  590
GRCh37.p2-ALT_REF_LOCI_9  All  1,681
Mapped  1,681
GRCh37.p2-PATCHES  All  294
Mapped  294
GRCh37.p2-non-nuclear  All  17
Mapped  17

  Genes, Exons and Introns back to top
Assembly: GRCh37.p2-Primary Assembly
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding214,5142 bp22,753 bp308 bp
RefSeq Non-Coding20,6031 bp99,903 bp452 bp
Model1,045,7612 bp22,753 bp271 bp
IntronsRefSeq Coding196,8812 bp1,160,411 bp6,287 bp
RefSeq Non-Coding11,60026 bp582,200 bp7,466 bp
Model924,4302 bp1,160,411 bp5,861 bp
TranscriptsRefSeq37,99733 bp101,520 bp2,908.71 bp
Transcripts per GeneRefSeq-1231
mRNA-000
One-exon GenesRefSeq3,309---
One-exon TranscriptsRefSeq3,659---
Exons per GeneRefSeq-03166
Exons per TranscriptRefSeq-13129
Assembly: Hs_Celera-Primary Assembly
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding209,4892 bp22,758 bp309 bp
RefSeq Non-Coding18,2421 bp87,058 bp471 bp
Model1,003,9352 bp22,758 bp271 bp
IntronsRefSeq Coding191,9122 bp1,163,155 bp6,339 bp
RefSeq Non-Coding9,56626 bp583,422 bp8,156 bp
Model883,2552 bp1,163,155 bp5,933 bp
TranscriptsRefSeq37,32033 bp101,520 bp2,961.23 bp
Transcripts per GeneRefSeq-1231
mRNA-000
One-exon GenesRefSeq3,321---
One-exon TranscriptsRefSeq3,720---
Exons per GeneRefSeq-03166
Exons per TranscriptRefSeq-13129
Assembly: HuRef-Primary Assembly
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding210,7652 bp22,754 bp306 bp
RefSeq Non-Coding19,8901 bp59,457 bp451 bp
Model978,2022 bp22,754 bp268 bp
IntronsRefSeq Coding192,9362 bp1,160,797 bp6,235 bp
RefSeq Non-Coding9,70325 bp334,315 bp7,981 bp
Model858,6402 bp1,160,797 bp5,824 bp
TranscriptsRefSeq37,36633 bp101,520 bp2,942.99 bp
Transcripts per GeneRefSeq-1231
mRNA-000
One-exon GenesRefSeq3,184---
One-exon TranscriptsRefSeq3,590---
Exons per GeneRefSeq-03176
Exons per TranscriptRefSeq-13139
Assembly: CRA_TCAGchr7v2-Primary Assembly
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding10,2382 bp14,889 bp305 bp
RefSeq Non-Coding1,5153 bp21,015 bp429 bp
Model49,0732 bp12,219 bp270 bp
IntronsRefSeq Coding9,35428 bp673,183 bp7,929 bp
RefSeq Non-Coding91034 bp310,790 bp6,157 bp
Model43,0842 bp673,165 bp7,032 bp
TranscriptsRefSeq1,91245 bp21,017 bp2,850.71 bp
Transcripts per GeneRefSeq-181
mRNA-000
One-exon GenesRefSeq176---
One-exon TranscriptsRefSeq185---
Exons per GeneRefSeq-01036
Exons per TranscriptRefSeq-11039
Assembly: GRCh37.p2-ALT_REF_LOCI_1
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding56219 bp4,937 bp313 bp
RefSeq Non-Coding858 bp5,671 bp609 bp
Model2,5494 bp5,241 bp270 bp
IntronsRefSeq Coding48869 bp10,507 bp1,052 bp
RefSeq Non-Coding5083 bp32,523 bp3,703 bp
Model2,16446 bp116,035 bp1,478 bp
TranscriptsRefSeq15363 bp13,143 bp2,245.19 bp
Transcripts per GeneRefSeq-191
mRNA-000
One-exon GenesRefSeq22---
One-exon TranscriptsRefSeq24---
Exons per GeneRefSeq-0303
Exons per TranscriptRefSeq-1306
Assembly: GRCh37.p2-ALT_REF_LOCI_2
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,51013 bp4,937 bp262 bp
RefSeq Non-Coding11910 bp5,671 bp546 bp
Model8,2164 bp5,241 bp220 bp
IntronsRefSeq Coding1,35569 bp19,863 bp877 bp
RefSeq Non-Coding7230 bp32,522 bp3,463 bp
Model7,34430 bp59,317 bp989 bp
TranscriptsRefSeq31863 bp13,143 bp2,151.88 bp
Transcripts per GeneRefSeq-191
mRNA-000
One-exon GenesRefSeq34---
One-exon TranscriptsRefSeq37---
Exons per GeneRefSeq-0665
Exons per TranscriptRefSeq-1668
Assembly: GRCh37.p2-ALT_REF_LOCI_3
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,4138 bp4,937 bp255 bp
RefSeq Non-Coding13110 bp5,671 bp527 bp
Model7,8634 bp5,241 bp215 bp
IntronsRefSeq Coding1,26047 bp33,156 bp886 bp
RefSeq Non-Coding7377 bp32,523 bp2,978 bp
Model7,0484 bp42,719 bp977 bp
TranscriptsRefSeq32263 bp13,143 bp2,096.65 bp
Transcripts per GeneRefSeq-1171
mRNA-000
One-exon GenesRefSeq32---
One-exon TranscriptsRefSeq35---
Exons per GeneRefSeq-0665
Exons per TranscriptRefSeq-1668
Assembly: GRCh37.p2-ALT_REF_LOCI_4
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,1189 bp4,937 bp277 bp
RefSeq Non-Coding12010 bp5,665 bp516 bp
Model6,6314 bp5,232 bp226 bp
IntronsRefSeq Coding9902 bp19,860 bp972 bp
RefSeq Non-Coding7283 bp32,195 bp3,654 bp
Model5,88145 bp57,730 bp1,011 bp
TranscriptsRefSeq27676 bp13,143 bp2,081.17 bp
Transcripts per GeneRefSeq-1141
mRNA-000
One-exon GenesRefSeq26---
One-exon TranscriptsRefSeq31---
Exons per GeneRefSeq-0664
Exons per TranscriptRefSeq-1667
Assembly: GRCh37.p2-ALT_REF_LOCI_5
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,4468 bp4,937 bp249 bp
RefSeq Non-Coding1018 bp5,661 bp507 bp
Model7,3384 bp5,242 bp208 bp
IntronsRefSeq Coding1,29847 bp178,642 bp1,015 bp
RefSeq Non-Coding6077 bp32,193 bp1,907 bp
Model6,54046 bp178,642 bp957 bp
TranscriptsRefSeq30976 bp13,143 bp2,076.82 bp
Transcripts per GeneRefSeq-1201
mRNA-000
One-exon GenesRefSeq30---
One-exon TranscriptsRefSeq33---
Exons per GeneRefSeq-0665
Exons per TranscriptRefSeq-1668
Assembly: GRCh37.p2-ALT_REF_LOCI_6
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,46911 bp4,937 bp256 bp
RefSeq Non-Coding11510 bp5,203 bp540 bp
Model8,2144 bp5,266 bp218 bp
IntronsRefSeq Coding1,31347 bp32,471 bp902 bp
RefSeq Non-Coding7128 bp32,208 bp3,788 bp
Model7,35147 bp61,343 bp981 bp
TranscriptsRefSeq33663 bp13,143 bp2,085.44 bp
Transcripts per GeneRefSeq-1211
mRNA-000
One-exon GenesRefSeq28---
One-exon TranscriptsRefSeq31---
Exons per GeneRefSeq-0665
Exons per TranscriptRefSeq-1668
Assembly: GRCh37.p2-ALT_REF_LOCI_7
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,32211 bp4,937 bp251 bp
RefSeq Non-Coding13810 bp5,659 bp484 bp
Model5,9455 bp5,241 bp229 bp
IntronsRefSeq Coding1,1852 bp50,004 bp887 bp
RefSeq Non-Coding8577 bp33,265 bp3,054 bp
Model5,23245 bp79,776 bp1,129 bp
TranscriptsRefSeq29676 bp13,143 bp2,077.82 bp
Transcripts per GeneRefSeq-1151
mRNA-000
One-exon GenesRefSeq25---
One-exon TranscriptsRefSeq30---
Exons per GeneRefSeq-0654
Exons per TranscriptRefSeq-1658
Assembly: GRCh37.p2-ALT_REF_LOCI_8
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding5137 bp3,937 bp342 bp
RefSeq Non-Coding585 bp286 bp164 bp
Model12722 bp3,937 bp317 bp
IntronsRefSeq Coding4782 bp17,646 bp3,382 bp
RefSeq Non-Coding0- bp- bp- bp
Model10672 bp17,646 bp2,812 bp
TranscriptsRefSeq9630 bp6,249 bp3,183.89 bp
Transcripts per GeneRefSeq-121
mRNA-000
Exons per GeneRefSeq-0173
Exons per TranscriptRefSeq-4178
Assembly: GRCh37.p2-ALT_REF_LOCI_9
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding18434 bp4,377 bp374 bp
RefSeq Non-Coding3627 bp3,197 bp675 bp
Model8143 bp4,381 bp326 bp
IntronsRefSeq Coding17472 bp75,571 bp6,612 bp
RefSeq Non-Coding15102 bp51,285 bp9,854 bp
Model69772 bp75,571 bp5,700 bp
TranscriptsRefSeq53336 bp6,816 bp3,323.31 bp
Transcripts per GeneRefSeq-161
mRNA-000
One-exon GenesRefSeq4---
One-exon TranscriptsRefSeq4---
Exons per GeneRefSeq-0185
Exons per TranscriptRefSeq-1178
Assembly: GRCh37.p2-PATCHES
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding1,8799 bp15,528 bp280 bp
RefSeq Non-Coding2977 bp5,021 bp413 bp
Model7,2202 bp15,980 bp254 bp
IntronsRefSeq Coding1,69212 bp125,193 bp2,917 bp
RefSeq Non-Coding10929 bp119,377 bp4,617 bp
Model6,30612 bp486,642 bp3,012 bp
TranscriptsRefSeq34368 bp15,534 bp2,949.83 bp
Transcripts per GeneRefSeq-181
mRNA-000
One-exon GenesRefSeq22---
One-exon TranscriptsRefSeq30---
Exons per GeneRefSeq-1408
Exons per TranscriptRefSeq-1399
Assembly: GRCh37.p2-non-nuclear
StatisticEvidencecountminmaxavg
ExonsRefSeq Coding13207 bp1,812 bp876 bp
RefSeq Non-Coding2954 bp1,559 bp1,256 bp
IntronsRefSeq Coding0- bp- bp- bp
RefSeq Non-Coding0- bp- bp- bp


  Object count: Clones, markers, genes, variation annotated on the sequence back to top
Assembly: GRCh37.p2-Primary Assembly       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
1830,877 (2,746)2,261 (4)19 (2)27,169 (86)1,309 (1)3,536 (7)993,782 (18)357,707 (1,066)15,703 (38)2,353,378 (7,427)5,246 (9)17,124 (14)96,119 (394)2,904 (3)1,263 (5)652,594 (1,891)14,599 (37)5,529 (4)2,419 (6)
2812,8082,0051322,3885912,346992,366342,69520,5882,435,0843,95313,85374,7451,8331,078421,48710,1773,3991,502
3632,7481,721416,4353911,924952,104288,8558,6911,985,4602,98311,87953,4521,644827356,3808,2592,7341,316
4550,410 (4,478)1,643 (2)10 (2)14,956 (79)442 (2)1,470 (4)801,407 (2)264,419 (463)11,596 (11)1,975,388 (4,791)2,565 (13)7,984 (14)55,416 (665)1,089571228,009 (245)5,4172,072843
5577,1051,766515,7112731,615821,646254,26818,8681,774,4042,7218,33251,6291,275681306,8076,7742,6121,018
6554,1431,784316,2639382,054691,890236,95719,6891,925,4492,8778,01366,5371,480626370,6237,4752,3091,759
7529,851 (1,961)1,546 (1)(1)19,189 (17)3621,880 (8)861,869 (5)231,509 (215)40,084 (9)1,657,678 (68)2,948 (2)9,893 (2)59,118 (210)1,311708312,859 (627)6,647 (2)2,2111,086
8486,433 (6)1,203 (2)(2)13,516 (14)3171,317 (2)551,355 (2)209,310 (132)8,602 (3)1,522,225 (361)1,499 (1)2,748 (1)38,358 (10)952521 (2)211,366 (28)4,9701,704 (2)684
9433,611 (2,147)1,014 (4)24 (4)14,954 (52)4111,522 (7)531,473 (4)185,464 (354)7,393 (4)1,256,887 (2,773)2,369 (5)6,521 (5)39,426 (178)1,038561 (1)223,725 (95)5,828 (16)1,762 (1)950
10477,0161,136814,9295021,457501,549198,5358,6431,417,3672,2476,60937,0231,022635232,8485,7651,777867
11457,450 (10)1,120 (1)(1)14,376 (8)4542,149602,265199,288 (64)23,835 (1)1,389,646 (180)2,1454,70857,004 (9)1,680708424,280 (5)9,4693,7921,249
12435,0641,172615,7542771,7061031,948207,6389,8591,357,6221,7853,84347,1601,630709418,4317,8983,0381,270
13294,35086658,50330670343617133,1539,7311,013,3141,2102,84420,31344132998,4482,634826361
14306,58066319,8031971,526451,240132,33211,149908,5191,5242,82349,613964376235,7064,8111,652831
15318,337677710,0892801,272431,317126,3566,569842,6561,3302,69029,478823472203,2334,5471,491688
16337,151721415,1822831,344431,529143,73512,506941,1071,4323,16235,8591,092410266,2266,0871,944782
17309,873 (1,727)670 (4)(4)17,984 (64)182 (1)1,770 (8)362,139 (8)136,857 (332)5,361 (8)831,648 (1,286)2,115 (9)5,385 (9)43,838 (165)1,643712394,776 (205)8,179 (2)3,3091,155
18254,552596 (1)(1)7,03110054643535104,675 (2)8,338790,478 (2)5791,12816,994 (1)339234103,068 (5)2,155782276
19200,962 (2,374)861 (2)(2)19,417 (27)942,085 (11)242,463 (26)110,557 (230)8,185 (514)649,112 (2,904)2,082 (2)4,929 (13)40,891 (727)1,548339341,360 (149)7,3342,6471,166
20236,58463848,861380884361,042103,1796,216713,0521,2894,08724,696777360167,6053,8171,192694
21123,740500 (1)(1)4,838 (8)804492247749,984 (42)14,711423,995 (289)7112,21119,425 (1)25613058,721 (1)1,271406193
22149,56058348,8153438552090162,54012,163418,6891,2244,77926,966626290164,5623,3051,252487
X412,5681,6421713,4869411,669641,771211,18014,582713,3362,3676,17158,3981,033440217,6215,2782,089748
Y15,337237172,50362426619334,1322,59996,55852077615,243382011,4022101928
Un (40,059) (39) (39) (631) (3) (108) (1) (54) (5,002) (367) (25,500) (99) (102) (9,248) (3,094) (22) (7) (6)
Total 9,737,110 (55,508)27,025 (61)190 (59)332,152 (986)9,515 (7)36,505 (155)1,356 (1)37,878 (119)4,325,325 (7,902)305,661 (955)29,393,052 (45,581)49,721 (140)142,492 (160)1,057,701 (11,608)27,438 (3)13,000 (8)6,422,137 (6,345)142,906 (79)50,548 (14)22,372 (12)
Assembly: Hs_Celera-Primary Assembly       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
1767,0131,3746726,1871,2873,2431003,602346,42915,3531,939,2953,0386,25386,4972,8711,251597,94614,2455,1582,356
2778,1781,7025921,6815982,166992,304333,91620,4062,023,4652,1814,53267,1671,8221,072408,1639,8343,4941,486
3627,3842,8402416,1213961,901962,089287,4018,6471,681,8781,8673,72451,7721,644830342,1278,2002,6771,313
4541,317 (74)2,313 (6)51 (2)14,482 (12)4501,391 (6)801,376 (3)261,885 (65)11,492 (1)1,664,508 (516)1,347 (5)2,358 (4)53,578 (258)1,077561224,099 (21)5,4252,107837
5556,2921,6693115,1012751,512831,596247,96018,7421,480,4051,4962,82949,1361,252681280,0876,7492,576994
6555,194 (610)398 (27)33 (1)16,397 (6)9412,071701,923239,371 (56)19,594 (1)1,625,371 (501)1,7863,44868,867 (12)1,457619372,101 (3)7,5102,3241,541
7490,843 (568)645 (23)55 (1)17,966 (47)3701,789 (1)861,794221,926 (312)39,660 (7)1,369,064 (614)1,643 (3)3,267 (2)59,084 (283)1,297696302,891 (11)6,5492,1551,079
8463,4261,4982112,8353131,220561,292206,2108,5711,270,1541,2252,24437,234939513205,9564,8911,642680
9373,288 (1)452 (6)49 (2)13,178 (10)4051,298531,362169,030 (38)7,348 (1)997,306 (123)1,2522,44634,043 (22)1,013551217,438 (5)5,6731,735944
10458,9135123014,5594971,285501,484191,9698,5781,177,7721,3202,66636,522987622226,7265,6101,721845
11450,6021,0582514,1784552,119602,253197,47023,5801,173,9282,0123,78855,8771,669703415,0869,3873,7631,228
12440,1311,4532215,7112831,7081031,912208,1949,8381,172,1881,6673,46848,5131,614702416,7767,8153,1361,274
13292,16514188,49830569343614132,8749,688870,9967181,24221,34044233298,1962,639831362
14296,68513359,6061951,464451,222130,98011,136769,5611,3042,27346,956979371232,3084,8681,660957
15285,332836 (2)34 (1)9,214 (1)2711,077 (1)471,192 (1)118,507 (8)6,152694,247 (20)1,0161,91427,089 (1)803466190,793 (6)4,458 (1)1,468 (1)674
16273,434901 (4)55 (2)13,745 (13)2771,172421,401130,693 (26)12,264 (3)719,278 (5)1,2022,71632,739 (10)1,070397242,6155,9011,973733
17289,7611,2043317,1141831,670362,082131,3515,235684,3451,6073,65541,7671,621716366,3058,0493,1021,133
18248,561797186,8739751943528102,9608,308663,9256221,05416,299345232101,6382,141799271
19193,1113161419,177922,047242,432109,2198,002552,2711,6443,59641,1481,574345340,3417,5322,6611,162
20235,6327958,857381903361,048102,6516,212610,9338161,92825,055771363167,4303,8221,195696
21112,5716244,617764102246547,09814,678334,93841381817,34525213058,3101,263398190
22138,438198248,3883388012186960,48012,113355,3288331,65026,873619288162,2323,3101,240491
X394,2182,6623412,7839431,603651,687212,08915,013699,3121,3022,33161,9001,030448212,2235,5021,895752
Y2,80795234452215635911,5211,11439,588891055,7931351,89810263
Un (124,791) (6,813) (5,898) (4,242) (73) (1,069) (3) (730) (47,616) (1,358) (291,104) (132) (152) (35,238) (646) (40) (41,761) (1,658) (545) (948)
Total 9,265,296 (126,044)23,338 (6,881)724 (5,907)317,713 (4,331)9,450 (73)34,218 (1,077)1,363 (3)36,586 (734)4,202,184 (48,121)301,724 (1,371)24,570,056 (292,883)32,400 (140)64,305 (158)1,012,594 (35,824)27,161 (646)12,894 (40)6,183,685 (41,807)141,475 (1,659)49,716 (546)22,001 (948)
Assembly: HuRef-Primary Assembly       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
1780,2144,51015025,9751,2933,290993,644347,29015,3931,941,53687,5082,8761,256629,04314,4765,4752,414
2787,1553,89411821,6776002,227972,328335,66520,3812,036,52168,5551,8351,067406,9009,9653,4811,491
3632,3232,9181516,1643971,904962,097287,8688,6521,679,23752,4191,636834356,5698,2322,7001,302
4545,5162,5863214,3814511,410801,384262,10311,5581,660,21454,2011,088568223,9425,4172,078836
5564,4222,6704515,1272681,552821,607249,58418,7081,489,39649,8371,256671290,5466,7492,5991,018
6557,8542,5932916,0839342,024691,915236,88319,4951,605,32865,7791,460623367,3247,4832,3001,715
7496,7823,10210417,9713691,833841,821224,51139,6441,381,11857,9591,307689301,6566,5852,1581,078
8477,0512,1074212,8903111,237551,303206,7668,5391,274,70036,086942515207,5054,9671,647685
9379,6912,16610313,1684111,347541,394170,2217,2971,013,65832,8831,032558215,6685,7231,746948
10462,4752,3418514,3935051,353511,521193,9498,5471,189,43534,9961,004616225,6375,7291,757859
11458,2992,1543314,3054552,127602,248198,22923,6231,175,77556,2771,680700415,4769,4573,8101,239
12433,6162,5362115,4832781,6901031,939206,4109,8341,151,28046,0801,639713414,6107,8963,1251,279
13291,6971,313198,37230469643616132,5899,622865,15420,01744133097,2782,653828363
14296,3941,613359,5231971,415451,232130,80311,067766,05748,571976365226,7514,8311,650965
15295,3621,5161059,3582821,110441,213120,5296,374709,29427,801810467192,7214,4871,476682
16298,4932,10117414,1302851,259431,473135,91412,286759,51733,5241,086410247,5586,0151,928739
17297,7102,3535817,2311821,703362,104132,8625,264692,49541,3851,637722379,1288,1563,3231,135
18253,5611,110146,9259853643532104,1818,273674,20416,684351231101,4752,133755278
19200,5382,5202818,838962,033242,423108,1917,961544,06439,1931,574349332,0567,6092,6951,160
20235,9781,334228,780384887371,038102,7106,183614,98823,956767357163,8943,7861,186689
21112,726667444,584784212247647,22414,524341,32116,86225713157,2291,314409192
22139,7531,082408,3473428152088060,60511,946351,96226,118617293161,5053,2901,258490
X367,22615,8636610,5259041,455661,600191,50512,799609,55140,730982405177,0355,0451,733717
Y12,9841,712389455222939222,7501,94892,38311,1981663,1991551411
Un (170,618) (4,572) (3,110) (4,171) (58) (1,688) (1) (486) (50,954) (835) (158,557) (31,244) (160) (9) (19,532) (736) (253) (329)
Total 9,377,820 (170,618)66,761 (4,572)1,420 (3,110)315,175 (4,171)9,476 (58)34,553 (1,688)1,356 (1)36,880 (486)4,209,342 (50,954)299,918 (835)24,619,188 (158,557)988,619 (31,244)27,269 (160)12,876 (9)6,194,705 (19,532)142,153 (736)50,131 (253)22,285 (329)
Assembly: CRA_TCAGchr7v2-Primary Assembly       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
7536,986241619,1924271,947911,912231,73040,0292,1352,94371,2582,2541,034341,01910,9445,4951,868
Total 536,986241619,1924271,947911,912231,73040,0292,1352,94371,2582,2541,034341,01910,9445,4951,868
Assembly: GRCh37.p2-ALT_REF_LOCI_1       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
65,9785215231851533,48749842,57416168015,5743114836,7191,313717701
Total 5,9785215231851533,48749842,57416168015,5743114836,7191,313717701
Assembly: GRCh37.p2-ALT_REF_LOCI_2       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
618,0784711,0573433187,2151,21193,7533041,42724,4404867673,6762,1641,199968
Total 18,0784711,0573433187,2151,21193,7533041,42724,4404867673,6762,1641,199968
Assembly: GRCh37.p2-ALT_REF_LOCI_3       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
615,3476219122923226,2791,06676,6362821,36421,8345416567,1212,0331,1711,133
Total 15,3476219122923226,2791,06676,6362821,36421,8345416567,1212,0331,1711,133
Assembly: GRCh37.p2-ALT_REF_LOCI_4       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
613,1916118082792766,0711,04378,3542651,15422,2084016555,8311,6731,038925
Total 13,1916118082792766,0711,04378,3542651,15422,2084016555,8311,6731,038925
Assembly: GRCh37.p2-ALT_REF_LOCI_5       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
612,9985918602833095,66899071,1652611,32021,9194526263,1321,8281,1081,032
Total 12,9985918602833095,66899071,1652611,32021,9194526263,1321,8281,1081,032
Assembly: GRCh37.p2-ALT_REF_LOCI_6       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
615,8755919613043366,5311,15485,4372871,38224,0294837273,4962,1361,2021,000
Total 15,8755919613043366,5311,15485,4372871,38224,0294837273,4962,1361,2021,000
Assembly: GRCh37.p2-ALT_REF_LOCI_7       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
613,3507618462942966,0801,03981,8702711,23823,1694055658,0691,7231,025957
Total 13,3507618462942966,0801,03981,8702711,23823,1694055658,0691,7231,025957
Assembly: GRCh37.p2-ALT_REF_LOCI_8       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
41,3615120169754225,024282236910834614
Total 1,3615120169754225,024282236910834614
Assembly: GRCh37.p2-ALT_REF_LOCI_9       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
177,04014132641533,10410221,27111337832295,2171447219
Total 7,04014132641533,10410221,27111337832295,2171447219
Assembly: GRCh37.p2-PATCHES       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
11,84411512822291,245655822484,0191594820
2557422461036816122623412593
396494666785629292421,0943184
41,1197325759652812915233526131
510,96318426536583,318762,1494855,36521914056
627421931141365104352323513
73242115551661813355552547
82,515723353653781276564097,6792448514
92,36515721329331,240641,01528129,80815814714
102,63612416416141,353434331681,358812111
112302121944152241
122,036136170951,2452520116241451358
155,2696212714121,25411426611,5143683
168404236595511819610997523314
1710,77126959158594,3031192,076902512,23428717040
182,659146150781,26628322144350502178
191,9059410315131,27516854931,45283339
204472115243111048
21835104518157579807031111,13555335
227634265874332853912696262197
Total 49,316177702,55429034321,9541,60911,0123669449,9741,6801,059237
Assembly: GRCh37.p2-non-nuclear       Mapped (Not placed)
ChrmCloneCompContigCpGFISH Clone (seq)Genes_seqNCI CloneRefSeq RNARepeatsSTSTCAG_GenesTCAG_RNAVariationcraGenescraRNAensGenesensRNAgbDNArnaBtrnaGgarnaHsrnaMmrnaRnrnaSsc
MT113728632
Total 113728632

  Object count: Genetic maps back to top
ChrmGenethonMarshfielddeCODE
1461657458
2452628398
3353515359
4280430293
5312456322
6311452289
7272401241
8249383237
9189291193
10281408250
11273387257
12249373231
13164243172
14162249158
15145201121
16180253149
17186286177
18136207152
19121205114
20144216141
216110764
22679765
X216253172
Total 5,2647,6985,013

  Object count: Cytogenetic maps back to top
ChrmGenes_cytoMitelmanMorbid
14,0241,592333
22,734448251
32,167915202
41,706310147
51,849950170
62,445903203
72,228973160
81,599553125
91,785874147
101,697342147
112,4171,041225
121,911674171
1383658083
141,684567113
151,475315114
161,595389146
172,062564191
1868525467
192,323323160
201,00829483
2152330036
2299150582
X1,920179277
Y489125
Total 42,15313,8573,638

  Object count: Physical maps back to top
ChrmGM99_G3GM99_GB4NCBI_RHStanford_G3TNGWI_RHWI_YAC
16615,2502,4335534,3431,377913
25863,1751,6155182,8981,182947
35273,0301,5735033,0711,060814
44902,0681,3987094,096761726
52832,2741,1893522,095813657
64223,0741,5944091,969833633
74602,2311,0944211,646806568
82761,7829792771,733634566
92661,7778522721,364637402
103712,0261,1943601,634701517
113852,5741,3154121,592826501
123232,3921,2863271,494760494
131561,028591163987364312
142761,5909052621,040513345
152141,5457901921,018505301
161921,2656832121,085446254
172651,825929232892460239
18163783487178857335311
192001,65572218345737880
201671,265720160544356269
2188435338157970145112
22109780337113265272141
X1761,314703159473494349
Y74111
Total 7,05645,13823,7277,19836,63414,65810,451



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