NCBI
Human genome overview page (Annotation Release 108)
Human genome overview page (Annotation Release 105)
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Region Shown:

Homo sapiens (human)  Annotation Release 108 (Current)BLAST human sequences
Chromosome: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 [ 15 ] 16 17 18 19 20 21 22 X Y MT
Query: CLN6    [clear]
 Master Map: Phenotype (includes QTLs) Summary of Maps mapsnoptions.gif 
Region Displayed: 67,200K-69,240K bp   Download/View Sequence/Evidence

Summary of Maps:
Map 1: unknown map "snp"
Region Displayed: 0.65-0.68 unknown_units
Map 2: Genes On SequenceTable View
Region Displayed: 67,200K-69,240K bp   Download/View Sequence/Evidence
Total Genes On Chromosome: 1814 [15 not localized]
Genes Labeled: 33 Total Genes in Region: 33
Map 3: Phenotype (includes QTLs)Table View
Region Displayed: 67,200K-69,240K bp   Download/View Sequence/Evidence
Total Phenotypes On Chromosome: 127
Phenotypes Labeled: 3 Total Phenotypes in Region: 3
Gene MAP2K5
OTTHUMP00000164363
MAP kinase kinase 5|MAP kinase kinase MEK5b|MAPK/ERK kinase 5|MAPKK 5|MEK 5|OTTHUMP00000164363|dual specificity mitogen-activated protein kinase kinase 5
dual specificity mitogen-activated protein kinase kinase 5
MAP kinase kinase 5|MAP kinase kinase MEK5b|MAPK/ERK kinase 5|MAPKK 5|MEK 5|dual specificity mitogen-activated protein kinase kinase 5
MAPK/ERK kinase 5
MAP kinase kinase MEK5b
MAPKK 5
MEK 5
MAP kinase kinase MEK5b|MAPK/ERK kinase 5|dual specificity mitogen-activated protein kinase kinase 5
MAP kinase kinase 5
hCG_1811971
Aliases
HsT17454, MAP2K5, PRKMK5, MAPKK5, MEK5
Gene ANP32A
OTTHUMP00000205820|acidic leucine-rich nuclear phosphoprotein 32 family member A|acidic nuclear phosphoprotein pp32|cerebellar leucine rich acidic nuclear protein|inhibitor-1 of protein phosphatase-2A|leucine-rich acidic nuclear protein|mapmodulin|potent heat-stable protein phosphatase 2A inhibitor I1PP2A|putative HLA-DR-associated protein I|putative human HLA class II associated protein I
leucine-rich acidic nuclear protein
cerebellar leucine rich acidic nuclear protein|inhibitor-1 of protein phosphatase-2A|leucine-rich acidic nuclear protein|mapmodulin|putative human HLA class II associated protein I
mapmodulin
acidic nuclear phosphoprotein pp32
acidic leucine-rich nuclear phosphoprotein 32 family member A|acidic nuclear phosphoprotein pp32|cerebellar leucine rich acidic nuclear protein|inhibitor-1 of protein phosphatase-2A|leucine-rich acidic nuclear protein|mapmodulin|potent heat-stable protein phosphatase 2A inhibitor I1PP2A|putative HLA-DR-associated protein I|putative human HLA class II associated protein I
inhibitor-1 of protein phosphatase-2A
potent heat-stable protein phosphatase 2A inhibitor I1PP2A
putative human HLA class II associated protein I
acidic leucine-rich nuclear phosphoprotein 32 family member A
putative HLA-DR-associated protein I
cerebellar leucine rich acidic nuclear protein
OTTHUMP00000205820
hepatopoietin Cn
hCG_23810
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
Aliases
MGC119787, LANP, ANP32A, MAPM, C15orf1, PP32, MGC150373, PHAPI, I1PP2A, PHAP1, HPPCn
Gene PIAS1
protein inhibitor of activated STAT, 1
AR interacting protein|DEAD/H (Asp-Glu-Ala-Asp/His) box binding protein 1|protein inhibitor of activated STAT-1|zinc finger, MIZ-type containing 3
zinc finger, MIZ-type containing 3
protein inhibitor of activated STAT-1
DEAD/H box-binding protein 1
gu-binding protein
AR interacting protein
E3 SUMO-protein ligase PIAS1
DEAD/H (Asp-Glu-Ala-Asp/His) box binding protein 1
protein inhibitor of activated STAT protein 1
AR interacting protein|DEAD/H (Asp-Glu-Ala-Asp/His) box binding protein 1|DEAD/H box-binding protein 1|E3 SUMO-protein ligase PIAS1|RNA helicase II-binding protein|gu-binding protein|protein inhibitor of activated STAT protein 1|protein inhibitor of activated STAT-1|zinc finger, MIZ-type containing 3
RNA helicase II-binding protein
hCG_23811
Aliases
ZMIZ3, MGC141879, MGC141878, PIAS1, DDXBP1, GBP, GU/RH-II
Gene FEM1B
FEM-1-like death receptor binding protein|FEM1-beta|OTTHUMP00000164386|fem-1-like death receptor-binding protein alpha|fem-1-like in apoptotic pathway protein alpha|protein fem-1 homolog B
OTTHUMP00000164386
hCG_22520
FEM-1-like death receptor binding protein|FEM1-beta|fem-1-like death receptor-binding protein alpha|fem-1-like in apoptotic pathway protein alpha|protein fem-1 homolog B
fem-1-like in apoptotic pathway protein alpha
FEM1-beta
protein fem-1 homolog B
fem-1 homolog b
FEM-1-like death receptor binding protein|fem-1 homolog b
F1A-alpha|FEM-1-like death receptor binding protein|FEM1-beta|fem-1-like death receptor-binding protein alpha|protein fem-1 homolog B
F1A-alpha
fem-1-like death receptor-binding protein alpha
FEM-1-like death receptor binding protein
Aliases
F1AA, F1A-ALPHA, FEM1B, FIAA, DKFZp451E0710
Gene CORO2B
OTTHUMP00000164389|clipin C|clipin-C|coronin, actin-binding protein, 2B|coronin, actin-binding, 2B|coronin-2B|coronin-like protein C
coronin, actin binding protein, 2B
coronin-like protein C
clipin-C
coronin-2B
clipin C|coronin, actin-binding protein, 2B|coronin, actin-binding, 2B
coronin, actin-binding, 2B
clipin C|clipin-C|coronin, actin-binding protein, 2B|coronin, actin-binding, 2B|coronin-2B|coronin-like protein C
clipin C
coronin, actin-binding protein, 2B
OTTHUMP00000164389
hCG_23812
Aliases
KIAA0925, CORO2B, CLIPINC
Gene ITGA11
integrin alpha-11
hCG_23809
integrin, alpha 11
integrin alpha 11
Aliases
HsT18964, ITGA11, RP11-709B3.2
Gene GLCE
heparan sulfate C5-epimerase
heparosan-N-sulfate-glucuronate 5-epimerase
hCG_22523
heparin/heparan sulfate:glucuronic acid C5-epimerase
D-glucuronyl C5-epimerase|UDP-glucuronic acid epimerase|glucuronyl C5-epimerase|heparan sulfate epimerase|heparin/heparan sulfate-glucuronic acid C5-epimerase|heparin/heparan sulfate:glucuronic acid C5-epimerase
D-glucuronyl C5-epimerase|UDP-glucuronic acid epimerase|glucuronyl C5-epimerase|heparan sulfate epimerase|heparin/heparan sulfate-glucuronic acid C5-epimerase
UDP-glucuronic acid epimerase
heparin/heparan sulfate-glucuronic acid C5-epimerase
heparan sulfate epimerase
D-glucuronyl C5-epimerase
glucuronyl C5-epimerase
Aliases
HSEPI, GLCE, KIAA0836
Gene RNU6-1
RNA, U6A small nuclear
Aliases
RNU6-1, U6, RNU6A, RNU6, U6-1
Gene CLN6
CLN6 protein
ceroid-lipofuscinosis neuronal protein 6
ceroid-lipofuscinosis, neuronal 6, late infantile
hCG_23813
ceroid-lipofuscinosis neuronal 6 late infantile
OTTHUMP00000164387|ceroid-lipofuscinosis neuronal protein 6
OTTHUMP00000164387
Aliases
CLN4A, FLJ20561, CLN6, HsT18960, nclf
Gene IQCH
IQ domain-containing protein H|OTTHUMP00000164307|OTTHUMP00000223606|testis development protein NYD-SP5
OTTHUMP00000164307
OTTHUMP00000223606
testis development protein NYD-SP5
IQ domain-containing protein H|testis development protein NYD-SP5
IQ domain-containing protein H
hCG_1660205
Aliases
NYDSP5, FLJ12476, IQCH, DKFZp434F2114
Gene NOX5
OTTHUMP00000164445
OTTHUMP00000229833
NOX5 variant lacking EF hands
NADPH oxidase, EF hand calcium-binding domain 5
OTTHUMP00000164443
NADPH oxidase, EF hand calcium-binding domain 5|NOX5 variant lacking EF hands|OTTHUMP00000164443
NADPH oxidase 5|NADPH oxidase, EF hand calcium-binding domain 5|NOX5 variant lacking EF hands
NADPH oxidase 5
OTTHUMP00000164444
NADPH oxidase 5|OTTHUMP00000164445|OTTHUMP00000229833
NADPH oxidase 5|OTTHUMP00000164443|OTTHUMP00000164444
Aliases
NOX5, MGC149776, NOX5A, MGC149777, NOX5B
Gene AAGAB
alpha- and gamma-adaptin-binding protein p34
hCG_23973
Aliases
p34, AAGAB, DKFZp686G08119, DKFZp667D2317, FLJ11506, PPKP1, PPKP1A, KPPP1
Gene ANP32A-IT1
ANP32A intronic transcript 1 (non-protein coding)
Aliases
MGC168461, C15orf28, HsT18971, FLJ11722, ANP32A-IT1, NCRNA00321
Gene CALML4
calmodulin-like protein 4|serologically defined breast cancer antigen NY-BR-20
calmodulin-like protein 4
serologically defined breast cancer antigen NY-BR-20
OTTHUMP00000164388
hCG_23814
OTTHUMP00000194712|calmodulin-like protein 4|serologically defined breast cancer antigen NY-BR-20
OTTHUMP00000164388|OTTHUMP00000194712|calmodulin-like protein 4|serologically defined breast cancer antigen NY-BR-20
OTTHUMP00000194712
calmodulin-like 4
Aliases
CALML4, NY-BR-20, MGC4809
Gene C15orf61
hypothetical protein LOC145853
uncharacterized protein C15orf61
Aliases
C15orf61, FLJ59587
Gene SPESP1
equatorial segment protein
glycosylated 38 kDa sperm protein C-7/8
ESP|equatorial segment protein|glycosylated 38 kDa sperm protein C-7/8
ESP
ESP|OTTHUMP00000164446|equatorial segment protein|glycosylated 38 kDa sperm protein C-7/8
OTTHUMP00000164446
Aliases
SPESP1, SP-ESP, MGC24663
Gene EWSAT1
hCG_2036885
testicular tissue protein Li 207
transmembrane protein 84
long intergenic non-protein coding RNA 277
Aliases
MGC126645, FLJ33768, MGC126643, TMEM84, EWSAT1, LINC00277, NCRNA00277
Gene SKOR1
LBX1 corepressor 1|Lbxcor1 homolog|corepressor for LBX1|functional Smad-suppressing element on chromosome 15|functional smad suppressing element 15|fussel-15|ladybird homeobox corepressor 1|transcriptional corepressor CORL1
OTTHUMP00000244645
OTTHUMP00000244644
OTTHUMP00000244643
Lbxcor1 homolog
corepressor for LBX1
LBX1 corepressor 1|functional Smad-suppressing element on chromosome 15|functional smad suppressing element 15|fussel-15|ladybird homeobox corepressor 1|transcriptional corepressor CORL1
functional smad suppressing element 15|transcriptional corepressor CORL1|transcriptional corepressor Corl1
transcriptional corepressor Corl1
fussel-15
LBX1 corepressor 1
functional smad suppressing element 15
functional Smad-suppressing element on chromosome 15
ladybird homeobox corepressor 1
transcriptional corepressor CORL1
Aliases
SKOR1, FUSSEL15, LBXCOR1, CORL1
Gene LOC390600
Gene RPS24P16
Aliases
RPS24_6_1447, RPS24P16
Gene LOC100286942
Gene MIR4312
Aliases
MIR4312
Gene CARSP1
Aliases
CARSP1
Gene LOC100421574
Gene LOC100422194
Gene IQCH-AS1
Aliases
IQCH-AS1, RP11-502I4.1
Gene HNRNPA1P5
Aliases
HNRNPA1P5
Gene HMGN2P40
Aliases
HMGN2P40
Gene LOC101929076
Aliases
RP11-34F13.2
Gene LOC105370870
Gene LOC105370871
Gene LOC105370873
Gene LOC107984718
Chromosome
15
Position
69,022,209 - 69,023,679 (1,471bp)
Orientation
+
Chromosome
15
Position
69,160,753 - 69,161,905 (1,153bp)
Orientation
-
Chromosome
15
Position
67,830,018 - 67,832,597 (2,580bp)
Orientation
-
Chromosome
15
Position
67,718,873 - 67,723,764 (4,892bp)
Orientation
+
Chromosome
15
Position
68,749,501 - 68,750,229 (729bp)
Orientation
+
Chromosome
15
Position
67,521,184 - 67,527,303 (6,120bp)
Orientation
+
Chromosome
15
Position
67,839,940 - 67,840,045 (106bp)
Orientation
-
Chromosome
15
Position
68,297,433 - 68,432,312 (134.9K)
Orientation
-
Chromosome
15
Position
68,206,992 - 68,229,742 (22,751bp)
Orientation
-
Chromosome
15
Position
67,834,308 - 67,838,879 (4,572bp)
Orientation
-
Chromosome
15
Position
67,973,817 - 67,974,627 (811bp)
Orientation
-
Chromosome
15
Position
68,518,373 - 68,727,806 (209.4K)
Orientation
+
Chromosome
15
Position
68,801,850 - 68,801,925 (76bp)
Orientation
-
Chromosome
15
Position
68,277,803 - 68,295,865 (18,063bp)
Orientation
+
Chromosome
15
Position
67,819,704 - 67,834,561 (14,858bp)
Orientation
+
Chromosome
15
Position
69,080,850 - 69,095,824 (14,975bp)
Orientation
+
Chromosome
15
Position
68,182,814 - 68,183,358 (545bp)
Orientation
-
Chromosome
15
Position
68,054,179 - 68,191,464 (137.3K)
Orientation
+
Chromosome
15
Position
68,930,500 - 69,057,161 (126.7K)
Orientation
+
Chromosome
15
Position
67,403,611 - 67,521,844 (118.2K)
Orientation
-
Chromosome
15
Position
68,190,705 - 68,206,110 (15,406bp)
Orientation
-
Chromosome
15
Position
68,254,633 - 68,254,901 (269bp)
Orientation
+
Chromosome
15
Position
67,542,606 - 67,807,117 (264.5K)
Orientation
+
Chromosome
15
Position
67,254,772 - 67,501,804 (247K)
Orientation
+
Chromosome
15
Position
68,930,500 - 68,946,811 (16,312bp)
Orientation
+
Chromosome
15
Position
68,778,535 - 68,820,922 (42,388bp)
Orientation
-
Chromosome
15
Position
67,627,768 - 67,629,469 (1,702bp)
Orientation
+
Chromosome
15
Position
68,483,202 - 68,488,294 (5,093bp)
Orientation
-
Chromosome
15
Position
69,160,555 - 69,272,209 (111.7K)
Orientation
+
Chromosome
15
Position
67,200,675 - 67,255,198 (54,524bp)
Orientation
-
Chromosome
15
Position
68,833,728 - 68,835,360 (1,633bp)
Orientation
+
Chromosome
15
Position
67,232,407 - 67,232,914 (508bp)
Orientation
+
Chromosome
15
Position
68,803,821 - 68,807,101 (3,281bp)
Orientation
-
Symbol
LOC100422194
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
ATP binding cassette subfamily G member 2 (Junior blood group) pseudogene
Symbol
LOC100421574
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
family with sequence similarity 47 member C pseudogene
Symbol
LOC105370870
Evidence code
rnaseq
Cytogenetic coordinates
15q23
Description
uncharacterized LOC105370870
Symbol
LOC107984718
Evidence code
rnaseq
Cytogenetic coordinates
15q23
Description
uncharacterized LOC107984718
Symbol
CARSP1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
cysteinyl-tRNA synthetase pseudogene 1
Symbol
C15orf61
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
chromosome 15 open reading frame 61
Symbol
RNU6-1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
RNA, U6 small nuclear 1
Symbol
ITGA11
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
integrin subunit alpha 11
Symbol
CLN6
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
CLN6, transmembrane ER protein
Symbol
LOC101929076
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
uncharacterized LOC101929076
Symbol
LOC100286942
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
ribosomal protein S15a pseudogene
Symbol
CORO2B
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
coronin 2B
Symbol
MIR4312
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
microRNA 4312
Symbol
FEM1B
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
fem-1 homolog B
Symbol
SKOR1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
SKI family transcriptional corepressor 1
Symbol
EWSAT1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
Ewing sarcoma associated transcript 1
Symbol
LOC105370871
Evidence code
mRNA
Cytogenetic coordinates
15q23
Description
uncharacterized LOC105370871
Symbol
PIAS1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
protein inhibitor of activated STAT 1
Symbol
NOX5
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
OTTHUMP00000164445
Symbol
IQCH-AS1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
IQCH antisense RNA 1
Symbol
CALML4
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
calmodulin like 4
Symbol
HMGN2P40
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
high mobility group nucleosomal binding domain 2 pseudogene 40
Symbol
MAP2K5
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
mitogen-activated protein kinase kinase 5
Symbol
IQCH
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
IQ motif containing H
Symbol
SPESP1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
sperm equatorial segment protein 1
Symbol
ANP32A
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
acidic nuclear phosphoprotein 32 family member A
Symbol
HNRNPA1P5
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
heterogeneous nuclear ribonucleoprotein A1 pseudogene 5
Symbol
LOC105370873
Evidence code
mRNA
Cytogenetic coordinates
15q23
Description
uncharacterized LOC105370873
Symbol
GLCE
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
glucuronic acid epimerase
Symbol
AAGAB
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
alpha and gamma adaptin binding protein
Symbol
LOC390600
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
cytokine induced apoptosis inhibitor 1 pseudogene
Symbol
RPS24P16
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
ribosomal protein S24 pseudogene 16
Symbol
ANP32A-IT1
Evidence code
best RefSeq
Cytogenetic coordinates
15q23
Description
ANP32A intronic transcript 1

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