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Aplysia californica (California sea hare) genome view
Annotation Release 100 statistics

  BLAST search Aplysia californica sequences
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At present, none of the scaffolds or contigs from the current public WGS assembly have been placed on chromosomes so you cannot browse the sequence data by chromosome. You can find sequenced regions of interest by querying Map Viewer with a gene symbol or accession number. You can also identify genes of interest by:

  • Searching Gene for California sea hare genes and following the link to Map Viewer.
  • Searching the sequence using BLAST against the genome. Results from a BLAST sequence alignment can be displayed in Map Viewer by following the link in 'Related Information' to the right of the alignment.

     Lineage: Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Euopisthobranchia; Aplysiomorpha; Aplysioidea; Aplysiidae; Aplysia; Aplysia californica

July 2013, Annotation Release 100

This full annotation run includes the following assembly(ies):

The sea slug Aplysia californica, also called the California sea hare, is a large gastropod that lives in vegetation-rich coastal areas. A. californica is a model organism for studies in cellular, molecular, and behavior neuroscience and evolutionary biology.

The NCBI Map Viewer provides graphical displays of features on the genome assembly. Map features that can be seen along the sequence include annotated genes and transcripts, Gnomon-predicted gene and transcript models, aligned transcript and genomic sequences, RefSeq scaffolds (the 'Contig' map), the assembly tiling path (the 'Component' map), and more. For some species, additional non-sequence maps such as Genetic maps, Radiation hybrid maps, and others may be available.

Available Documentation:

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