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Alignment last updated: 12/19/2014 15:59:48

Join Legend

  • Red circle Serious alignment problem, requires review. (details...)
    • Zero, or more than one, overlaps
    • Half dove-tail >50 bp
    • Alignment identity <98%
    • Alignment length <50 bp
    • >2 gaps, each gap >25 bp, not marked as an SSR
    • >0 gaps, each gap >50 bp, not marked as an SSR
    • >0 gaps, each gap >500 bp, not marked as an SSR
    • >0 gaps, each gap >500 bp, marked as an SSR
  • Yellow circle Minor alignment problem. (details...)
    • Exactly one overlap
    • Half dove-tail >0 bp and <=50bp
    • Alignment identity <99.6%
    • Alignment length <2000 bp
    • >0 gaps, each gap >25 bp, not marked as an SSR
    • >0 gaps, each gap >50 bp, not marked as an SSR
    • >0 gaps, each gap >500 bp, not marked as an SSR
    • >0 gaps, each gap >500 bp, marked as an SSR
  • Green circle Excellent alignment, meets all defined criteria. (details...)
    • Exactly one RuleInfo
    • Half dove-tail <=0 bp
    • Alignment identity >=99.6%
    • Alignment length >=2000 bp
    • <=0 gaps, each gap >25 bp, not marked as an SSR
    • <=0 gaps, each gap >50 bp, not marked as an SSR
    • <=0 gaps, each gap >500 bp, not marked as an SSR
    • <=0 gaps, each gap >500 bp, marked as an SSR
  • Black circle Certificate submitted, not yet approved.
  • Purple circle Certificate submitted and approved.
  • Gray circle Valid, contained clone
  • White circle Join not evaluated due to one accession not being finished.

Alignment for AC212129.5 and AC203887.4

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AC212129.5 Zea mays chromosome 1 clone CH201-69K4, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces [htgs_limited_order]

Length: 164,833 bp

AC203887.4 Zea mays chromosome 1 clone CH201-115H21, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces [htgs_limited_order]

Length: 182,245 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

  • Alignment 1
  • Align ID: 117687
  • Total Length: 17905
  • Aligned Length: 17898
  • Percent Identity: 99.9944
  • Number of Gaps: 7
  • Number of Mismatches: 1
  • Source: CtgOverlap Seq-Align
  • Valid Switchpoint: true (A)
Overlap Image

Switch Points
TypePoint1Point2Orient1Orient2CuratorCommentTimeIdAlignmentReleases
A16483317906++chenhcTaxid 4577 chrom 1 Primary assembly2014-12-19 15:59:48.223120811117687


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Alignment 1 of 1

 AC212129.5 : + : 146936..164833
 AC203887.4 : + : 1..17905
 Mismatches = 1, Gaps = 7, Length = 17905
 Percent identity = 99.99%
 Score = 3.301e+04 bits (17877), Expect = 0
  1 BAC and 0 Fosmid bridging clones.
  1 BAC and 0 Fosmid concordant clones.
  0 BAC and 0 Fosmid discordant clones.

AC212129.5 >146936  gaattctcctaattttgtgctcgggataaccagtagggtataaaatgtaaccctcgttat 146995 
AC203887.4 >1       ............................................................ 60     

AC212129.5 >146996  cctaaggcatgggaaccttgcccttaacaaagttagataatcttttaggaggggcattaa 147055 
AC203887.4 >61      ............................................................ 120    

AC212129.5 >147056  gcttgacattgtctccctgttggaagccaatgccatccttaatgacagggcatctcccac 147115 
AC203887.4 >121     ............................................................ 180    

AC212129.5 >147116  tatagagcatgcttctagcaaatttaaatttttcattttctaagtcatgctcattgattt 147175 
AC203887.4 >181     ............................................................ 240    

AC212129.5 >147176  tggcactaagttgagctatgtgatcattttgttgtttaattaaagctaggtgatcatgaa 147235 
AC203887.4 >241     ............................................................ 300    

AC212129.5 >147236  tagcatcaacatttatatctctacatctagtacaaacagtaacatgctcaactgtagatg 147295 
AC203887.4 >301     ............................................................ 360    

AC212129.5 >147296  tagagggtttgcaagtatttaactcaacaatcttagtatgcaaaatagcattctcatctc 147355 
AC203887.4 >361     ............................................................ 420    

AC212129.5 >147356  taagattggaaatagaaacattgcaaacatttaaatctttagccttagcagttaattttt 147415 
AC203887.4 >421     ............................................................ 480    

AC212129.5 >147416  cattctcaattttaaggctagagagagatgcattcaatttgttaatcttagcaatcaaat 147475 
AC203887.4 >481     ............................................................ 540    

AC212129.5 >147476  tagaattatcatttctaaggttgacaagagaatcatcactaacatttactttctcaacct 147535 
AC203887.4 >541     ............................................................ 600    

AC212129.5 >147536  tagcaatcaatttatcattttcagatctaatgttggaaatagtgtcatggcaagtgctta 147595 
AC203887.4 >601     ............................................................ 660    

AC212129.5 >147596  gctcactagttatttttcacatttttctatttcctgagcataagcatttttaactttaac 147655 
AC203887.4 >661     ............................................................ 720    

AC212129.5 >147656  atgcttcttattttttttaataaggaagtcctcttggctatccaagagttcatccttctc 147715 
AC203887.4 >721     ............................................................ 780    

AC212129.5 >147716  atgaatagcactaatcaattcattcaatttttctttttgttgcatgtttaagttggcaaa 147775 
AC203887.4 >781     ............................................................ 840    

AC212129.5 >147776  aagggtgagcaaatcatcctcatcatcactagagctagcctcatcactagatgttgcata 147835 
AC203887.4 >841     ............................................................ 900    

AC212129.5 >147836  tttagaagctctagattttaccttcttctttttgtcatcctttgtcatgaggcacttgtg 147895 
AC203887.4 >901     ............................................................ 960    

AC212129.5 >147896  gccgacgttggggaagagaaggcccttgttgacggcgatgtttgtggcgtcctcgtcgga 147955 
AC203887.4 >961     ............................................................ 1020   

AC212129.5 >147956  ggaggagtcggtggagctctcatcggagtcccactcctggcaaacatgggcatcgccgcc 148015 
AC203887.4 >1021    ............................................................ 1080   

AC212129.5 >148016  cttcttcttgtaatacttcttcttctcctttcttctccctttcttgtcgtcgcccctgtc 148075 
AC203887.4 >1081    ............................................................ 1140   

AC212129.5 >148076  actatcacttgataatggacatttagcaatgaaatgaccgggcttaccacacttgtagca 148135 
AC203887.4 >1141    ............................................................ 1200   

AC212129.5 >148136  aactttcttagagcggggcttgtagtccttcccctcctttgcttgaggatttggcgaaag 148195 
AC203887.4 >1201    ............................................................ 1260   

AC212129.5 >148196  ctcttgatgatgagcgccatctcctcgttgtcgagcttggaggcatcgatggggagtcta 148255 
AC203887.4 >1261    ............................................................ 1320   

AC212129.5 >148256  cttgatgtagactcttctttcttctcctccgtcgccttgaatgcgacgggttgcatttcg 148315 
AC203887.4 >1321    ............................................................ 1380   

AC212129.5 >148316  ggtatggaggaggcgccttgctcaatgattttcttggagcctttgatcatcaattcaaag 148375 
AC203887.4 >1381    ............................................................ 1440   

AC212129.5 >148376  ctcataaattttcctataacctcctcgggagacattagcttgtatctaggatcaccacga 148435 
AC203887.4 >1441    ............................................................ 1500   

AC212129.5 >148436  attaattgaacttgtgtaggattaagaaatacatgtgatcttagaataaccttgaccatt 148495 
AC203887.4 >1501    ............................................................ 1560   

AC212129.5 >148496  tcatggtcatcccatttggtgcttccgaggttgcgcacttggttcaccaaggccttgagc 148555 
AC203887.4 >1561    ............................................................ 1620   

AC212129.5 >148556  cggttgtacattgcttgtggctcctccccttgatgaagcatgaagcgaccgagctccccc 148615 
AC203887.4 >1621    ............................................................ 1680   

AC212129.5 >148616  tcgatcgtttccctcttggtgatcttggtcacctcgtctccttcgtgcgcggtctttaga 148675 
AC203887.4 >1681    ............................................................ 1740   

AC212129.5 >148676  acgtcccaaatctctttggcccttttcaacccttgcaccttattatactcctctcgactt 148735 
AC203887.4 >1741    ............................................................ 1800   

AC212129.5 >148736  agagaggcgaggagtatagtagtggcttgggagttgaagtgtcggatttgggctacctcg 148795 
AC203887.4 >1801    ............................................................ 1860   

AC212129.5 >148796  tccgagtcatagccttcatcctccatggatggttcctgtgcaccaaactcgacaatgtcc 148855 
AC203887.4 >1861    ............................................................ 1920   

AC212129.5 >148856  caaatgctagcgtggagtgaggttagatggtgcctcattttatcactccacatacaataa 148915 
AC203887.4 >1921    ............................................................ 1980   

AC212129.5 >148916  tcttcaccgtaaaaaatcggtggtttgcctagtgggacaaaaagtaaaggagtgtgtttg 148975 
AC203887.4 >1981    ............................................................ 2040   

AC212129.5 >148976  gaaatgcgaggatagcgttgggggatcttactaaacttcttgcgctcatggcgcttagaa 149035 
AC203887.4 >2041    ............................................................ 2100   

AC212129.5 >149036  gtgacggacggcgtgtcggatccgaaggtggaaggcgatgaagaatcggtctcgtagtag 149095 
AC203887.4 >2101    ............................................................ 2160   

AC212129.5 >149096  accactttcttcattttcttcttgtcgccactccggtgcaacttgacgcggggaggtgat 149155 
AC203887.4 >2161    ............................................................ 2220   

AC212129.5 >149156  tcctccctctttttgttgtcggactctcccggtggagctttcccgtggcttgtggcgggc 149215 
AC203887.4 >2221    ............................................................ 2280   

AC212129.5 >149216  ttctcgccggtcaccatctccttcttggcgtgagctcccgacatcacttcgagcggttaa 149275 
AC203887.4 >2281    ............................................................ 2340   

AC212129.5 >149276  gctttaatgaagtatgtggctctgataccaattgaaagtcgcctggaggtggggtgaata 149335 
AC203887.4 >2341    ............................................................ 2400   

AC212129.5 >149336  ggcaaatctgaaatttataaagtttaagcacaactacaagccggggttagcgttagaaat 149395 
AC203887.4 >2401    ............................................................ 2460   

AC212129.5 >149396  ataaacaagtccgaaagaaagggcgaaaacaaatcacaagcaaataaggtggatgacacg 149455 
AC203887.4 >2461    ............................................................ 2520   

AC212129.5 >149456  gtgatttgttttaccgaggttcggttcttgcaaacctactccccattgaggtggtcacaa 149515 
AC203887.4 >2521    ............................................................ 2580   

AC212129.5 >149516  agatcgggtctctttcaacccttttcctctctcaaacggtcacctagaccgagtaagctt 149575 
AC203887.4 >2581    ............................................................ 2640   

AC212129.5 >149576  ctcttctcaatcaatcgggacactaagtccccacaaggaccaccacacaattggtgtctc 149635 
AC203887.4 >2641    ............................................................ 2700   

AC212129.5 >149636  ttgccttgattacaattgagttagaaacaagaaagaaggaagaagaaaagcaaaccaagc 149695 
AC203887.4 >2701    ............................................................ 2760   

AC212129.5 >149696  gcaagagctcaaatgaacacaaatgtctctctctagtcactaatttctttggagtgattc 149755 
AC203887.4 >2761    ............................................................ 2820   

AC212129.5 >149756  tggacttgggagaggatttgatctctttgattgtgtctttgaatgaagtctagagctctt 149815 
AC203887.4 >2821    ............................................................ 2880   

AC212129.5 >149816  gtatgaggtttgaaggctgaaaacttggattcaatgaatggtgggtggttgggggtattt 149875 
AC203887.4 >2881    ............................................................ 2940   

AC212129.5 >149876  atagccccaatcaccaaagtgactgttggtgagggcttctgtcgcatggcgcaccggaca 149935 
AC203887.4 >2941    ............................................................ 3000   

AC212129.5 >149936  gtccggtgcgccaccggacactgtccggtgcgccagccacgtcacccgaccgttgggttt 149995 
AC203887.4 >3001    ............................................................ 3060   

AC212129.5 >149996  tgatcgttggagcttctgacagatgggccaccggactgtccggtgcgccttatggcgctg 150055 
AC203887.4 >3061    ............................................................ 3120   

AC212129.5 >150056  ctccgacttctgcgcgcgtaggcgcgcactgttcacttttactgttccgttgcagacgat 150115 
AC203887.4 >3121    ............................................................ 3180   

AC212129.5 >150116  cgttggcgctgtgtagtcgttactccgctggcacaccggacagtctggtggtgcaccgga 150175 
AC203887.4 >3181    ............................................................ 3240   

AC212129.5 >150176  cagtccagtgaattatagcggagcggctctcagaattcccgaaggtggcaagttcggagt 150235 
AC203887.4 >3241    ............................................................ 3300   

AC212129.5 >150236  tgggttccctggtgcaccggacactgtccggtgcgccagaacagggcacactttggtagt 150295 
AC203887.4 >3301    ............................................................ 3360   

AC212129.5 >150296  cttttgctcttttcatttgaacactttcttagtctttttattggtttgttgtgaaccttt 150355 
AC203887.4 >3361    ............................................................ 3420   

AC212129.5 >150356  ggcacctgtagaactcataatctagagcaaactagttagtccaattaatttgtgttgggc 150415 
AC203887.4 >3421    ............................................................ 3480   

AC212129.5 >150416  aattcaaccaccaaaattcatataggaaaaggtgtaagcctatttccctttcagctctaa 150475 
AC203887.4 >3481    ............................................................ 3540   

AC212129.5 >150476  atgtcatgcttacatttatgatggaaaattttctagaaatgctcataggagttatgatca 150535 
AC203887.4 >3541    ............................................................ 3600   

AC212129.5 >150536  tgataccttcaagtcacatgctatgtttgcttttagctctacttttgtgcatagtagaag 150595 
AC203887.4 >3601    ............................................................ 3660   

AC212129.5 >150596  taagcctaggagacatcatgttgtgcattatgtgcctaggaaagtaggcaatgaacc-tt 150654 
AC203887.4 >3661    .........................................................t.. 3720   

AC212129.5 >150655  ctactatttaacatgcttgcaatacttcttttgcaatttgttgtaaaaatgaaaaggtag 150714 
AC203887.4 >3721    ............................................................ 3780   

AC212129.5 >150715  ttgctaggaagttgggatccaaatgcaagggagataagacttgtatttgggttccaaagg 150774 
AC203887.4 >3781    ............................................................ 3840   

AC212129.5 >150775  ctattgtaactaacctggtaggaccgaacaagagttgggtacctaaaacccaagcctaat 150834 
AC203887.4 >3841    ............................................................ 3900   

AC212129.5 >150835  ttgccttgtaggtttatgcatccgggggctcaagctggattatcgacagcggatgcacaa 150894 
AC203887.4 >3901    ............................................................ 3960   

AC212129.5 >150895  accacatgacgggggagaagaagatgttcaccacctacgtcaagaacaatgattcccagg 150954 
AC203887.4 >3961    ............................................................ 4020   

AC212129.5 >150955  atacgattatttttggagatgaaaatcaaggcaaagtcaaaggtttggggaaaatagcca 151014 
AC203887.4 >4021    ............................................................ 4080   

AC212129.5 >151015  tcacaagcgagcacactatttctaatatatttttagtagagttgctaggctataatctcc 151074 
AC203887.4 >4081    ............................................................ 4140   

AC212129.5 >151075  tgtctgtaagtctattgtgccacatgggctacaattgtttgtttacaaatgttgatgtat 151134 
AC203887.4 >4141    ............................................................ 4200   

AC212129.5 >151135  ctgtctttagaaggagtgatggttcattagcgtttaagggtgcactagatggcaaactct 151194 
AC203887.4 >4201    ............................................................ 4260   

AC212129.5 >151195  acttagttgatttttcgaatgaggaggccgatctagatgcatgcttaatagctaagacta 151254 
AC203887.4 >4261    ............................................................ 4320   

AC212129.5 >151255  gcatgggctggctgtggcatcgtcgtctagcacatgtcgggatgaagaaccttcataaac 151314 
AC203887.4 >4321    ............................................................ 4380   

AC212129.5 >151315  ttctaaagggagaacatgtgttaggactaaccaatgtctgcttcgaaaaagatagacctt 151374 
AC203887.4 >4381    ............................................................ 4440   

AC212129.5 >151375  gtgcaacttgtcaagcagggaaacaggtgggaagcactcatcacaacaagaatgtgatga 151434 
AC203887.4 >4441    ............................................................ 4500   

AC212129.5 >151435  ctacatcaagaccactggagcttctccatatggatctctttggacccgtcgcctacctta 151494 
AC203887.4 >4501    ............................................................ 4560   

AC212129.5 >151495  gcatcgggggaagtaagtatggtttagtaattgttgatgatttttcccgcttcacttggg 151554 
AC203887.4 >4561    ............................................................ 4620   

AC212129.5 >151555  tatttttttgcaggataaatcataaacccaagagaccctaaagcactttctaaggagggc 151614 
AC203887.4 >4621    ............................................................ 4680   

AC212129.5 >151615  tcaaaacgagtttgagctcaaggtgaaaaagataagaagcgacaacgagtccgagttcaa 151674 
AC203887.4 >4681    ............................................................ 4740   

AC212129.5 >151675  gaatctgcaagtggaggagtaccttgaggaggaaggcatcaagcacgagttctctgctcc 151734 
AC203887.4 >4741    ............................................................ 4800   

AC212129.5 >151735  ctacacaccacagcaaaatggtgtggtagagaggaagaacaggacacttatcgacacggc 151794 
AC203887.4 >4801    ............................................................ 4860   

AC212129.5 >151795  gaggacaatgcttggagagttcaagacgcctgagcggttttggtcggaagctgtgaacac 151854 
AC203887.4 >4861    ............................................................ 4920   

AC212129.5 >151855  agctttccacgccataaaccggctctaccttcatcgcctcctcaagaagacctcgtatga 151914 
AC203887.4 >4921    ............................................................ 4980   

AC212129.5 >151915  acttcttactggtaacaaacccaacatctcatactttcgtgtatttgggagcaaatgtta 151974 
AC203887.4 >4981    ............................................................ 5040   

AC212129.5 >151975  cattctagtgaagaaaggtagaaattctaaatttgctctcaaagctgtagaagggttttt 152034 
AC203887.4 >5041    ............................................................ 5100   

AC212129.5 >152035  actagggtatgactcaaatacaagggcatatagagtcttcaacaaatcattgggtttggt 152094 
AC203887.4 >5101    ............................................................ 5160   

AC212129.5 >152095  tgaagtctctagcgacgttgtatttgatgagactaatggctctccaagagagcaagttga 152154 
AC203887.4 >5161    ............................................................ 5220   

AC212129.5 >152155  tcttgatgatgtagatgaagatgatgttccaacggccgcaatacgtaccatggctattgg 152214 
AC203887.4 >5221    ............................................................ 5280   

AC212129.5 >152215  agatgtgcgaccacaggaacaacaagagcaagatcaaccttctttctcaacaatggtgca 152274 
AC203887.4 >5281    ............................................................ 5340   

AC212129.5 >152275  tcccccaactcaagatgatgaacaggttcctcaagaagaggtgtgtgatcaagggggagc 152334 
AC203887.4 >5341    ............................................................ 5400   

AC212129.5 >152335  acaagaagaaccagctatgaaggaagaagcaccacaggcccctccaactcaaatccgagc 152394 
AC203887.4 >5401    ............................................................ 5460   

AC212129.5 >152395  gacgatccaacgaaatcaccccgttgactagattttgggtgacataagcaagggagtaac 152454 
AC203887.4 >5461    ............................................................ 5520   

AC212129.5 >152455  tactcgctcaaggttagctaacttttgtgagcattactcgtttgtctcttctattgagcc 152514 
AC203887.4 >5521    ............................................................ 5580   

AC212129.5 >152515  tttcagggtagaagaggccttgcaggatccggactaggtgttggccatgcaggaagagct 152574 
AC203887.4 >5581    ............................................................ 5640   

AC212129.5 >152575  caacaacttcaagtgaaatgaagtttcgagcctggtgccacgtccaaagcaaaacgttgt 152634 
AC203887.4 >5641    ............................................................ 5700   

AC212129.5 >152635  gggaaccaagtgggtgttccgcaacaagcaagacaagcacggggtggtgacaagaaacaa 152694 
AC203887.4 >5701    ............................................................ 5760   

AC212129.5 >152695  ggctcgacttgtggcaaaaggttatgcccaagtcgcaggtttggattttgaggagacttt 152754 
AC203887.4 >5761    ............................................................ 5820   

AC212129.5 >152755  tgctcctgtggctaggctagagtccattcgcattctgttagcctatgtcgctcaccattc 152814 
AC203887.4 >5821    ............................................................ 5880   

AC212129.5 >152815  tttcaggttgtttcaaatggacgtgaagagcgctttcctcaatgggccaatcaaggagga 152874 
AC203887.4 >5881    ............................................................ 5940   

AC212129.5 >152875  ggtgtatgtggaacaaccccctggctttgaggatgacagagtttagcagggtgatgacac 152934 
AC203887.4 >5941    ............................................................ 6000   

AC212129.5 >152935  agaaatttgagatgtcgatgatgggcgagttgacatactttcttgggtttcaagtgagac 152994 
AC203887.4 >6001    ............................................................ 6060   

AC212129.5 >152995  aactcaaggacgacaccttcctctcccaaaaaaagtacactcaagatcttctcaataggt 153054 
AC203887.4 >6061    ............................................................ 6120   

AC212129.5 >153055  ttgggatgaaggacgccaagcccgcgaagacaccgatgagaaccgacggacatgtcgacc 153114 
AC203887.4 >6121    ............................................................ 6180   

AC212129.5 >153115  tcaacaaaggaggtaagtccattgatcaaaaggcataccagtctatgataggttccttgc 153174 
AC203887.4 >6181    ............................................................ 6240   

AC212129.5 >153175  tttatttatgtgctagtagaccgaatattatgcttagcgtatgcatgtgtgctagatttc 153234 
AC203887.4 >6241    ............................................................ 6300   

AC212129.5 >153235  aatccgacccaagggaatgtcaccttgtggccgttaagcgaattcttagatatttagttg 153294 
AC203887.4 >6301    ............................................................ 6360   

AC212129.5 >153295  ctacgccttgcttcgggatctggtatccaaagggatctacctttgacttgattggatact 153354 
AC203887.4 >6361    ............................................................ 6420   

AC212129.5 >153355  cagactccgattatgctggatgcaaggtggataggaagagtacatcagggacgtgccaat 153414 
AC203887.4 >6421    ............................................................ 6480   

AC212129.5 >153415  tcctaggaaggtccctggtgtcttggagttctaagaaacaaacctttgttgccctatcca 153474 
AC203887.4 >6481    ............................................................ 6540   

AC212129.5 >153475  ccgctgaggccgagtatgttgccgcatgacagtgttgcgcgcaactactttggatgaggc 153534 
AC203887.4 >6541    ............................................................ 6600   

AC212129.5 >153535  aaaccctccgggacttcggctacaatctgagcaaagtctcactcctatgtgacaatgaga 153594 
AC203887.4 >6601    ............................................................ 6660   

AC212129.5 >153595  gtgcaatccgcatggcggataatcctgttgaacacagccgcactaagctcatagacatcc 153654 
AC203887.4 >6661    ............................................................ 6720   

AC212129.5 >153655  ggcatcactttttgtgagaccaccagcaaaagggagatatcgaagtgttctatattagca 153714 
AC203887.4 >6721    ............................................................ 6780   

AC212129.5 >153715  ccgagaaccagctagctgatatctttaccaagcctttagatgagaaaaccttttgcaggc 153774 
AC203887.4 >6781    ............................................................ 6840   

AC212129.5 >153775  tgcgtagtgagctcaatatcttagattcgcgtaacttggattgatctatagcatacatgt 153834 
AC203887.4 >6841    ............................................................ 6900   

AC212129.5 >153835  gttttatgtctttgatcacgttaccttatgcatttatgagatttgttgtttatttatggt 153894 
AC203887.4 >6901    ............................................................ 6960   

AC212129.5 >153895  gctcaagttgtgcaagggacccccgggccttacaagtccatgtgtgagtgatgcacatat 153954 
AC203887.4 >6961    ............................................................ 7020   

AC212129.5 >153955  ttagggggagaagtgctacaacttgaccctttgagactaacatttgtcgttgagtttact 154014 
AC203887.4 >7021    ............................................................ 7080   

AC212129.5 >154015  taatgtagtctcaaaggtaaattgaaagggaaaggtgaacttggaccgtgcaaagacttc 154074 
AC203887.4 >7081    ............................................................ 7140   

AC212129.5 >154075  cactgcactccggtattagtgtactcacctccaagttcattcttatactattattgcctt 154134 
AC203887.4 >7141    ............................................................ 7200   

AC212129.5 >154135  tcttgctcttaattgatatttttggtaaggcaatgggttaaagggccaacaatggtcccg 154194 
AC203887.4 >7201    ............................................................ 7260   

AC212129.5 >154195  ttttggtgcttaatgccaaagggggagaaattaaggccaaagcaaacggatcagctacca 154254 
AC203887.4 >7261    ............................................................ 7320   

AC212129.5 >154255  cttgtgaattttgaaagcaatagagttagaacttttgatttgtcaaaatactctcattgc 154314 
AC203887.4 >7321    ............................................................ 7380   

AC212129.5 >154315  aaaatttggtctcttgtggtgagaatttctgattatgggaaaagggggagttttcaattg 154374 
AC203887.4 >7381    ............................................................ 7440   

AC212129.5 >154375  gaatatctctctttgtgcctaaacatgtgtgtttgacttagagataggaaaatgattttg 154434 
AC203887.4 >7441    ............................................................ 7500   

AC212129.5 >154435  atttgcaaaaacaaaccaagtggtggcaaagaatgatccaaatatgccaaattagagtca 154494 
AC203887.4 >7501    ............................................................ 7560   

AC212129.5 >154495  aaaacaatttggtcttcaatttgaattgatgttgcatgttttgcattgcttttgatgtgt 154554 
AC203887.4 >7561    ............................................................ 7620   

AC212129.5 >154555  tggcataaatcaccaaaaagggggagattgaaagggaaatgtgcccttgggcaatttcta 154614 
AC203887.4 >7621    ............................................................ 7680   

AC212129.5 >154615  ttatgttttggtgattaagtgcccaacacatttaaataagctctcgtgtgctaaataaag 154674 
AC203887.4 >7681    ............................................................ 7740   

AC212129.5 >154675  agagaagtgataatcaaagcaaaggtatgtttctagactgagtatattggtttttgtgta 154734 
AC203887.4 >7741    ............................................................ 7800   

AC212129.5 >154735  ctaatacatttgtctaagtgctagaaacagagaaaagaagaaaagaaaaaagatgcaaaa 154794 
AC203887.4 >7801    ............................................................ 7860   

AC212129.5 >154795  -gacttgtc-ttggtacagccaagactcagctcagtctggcacaccggactgtccggtgg 154852 
AC203887.4 >7861    a........t.................................................. 7920   

AC212129.5 >154853  tgcaccggacagtgtccagtgcaccaggctgaactccggtgaacaggccgctctcgggaa 154912 
AC203887.4 >7921    ............................................................ 7980   

AC212129.5 >154913  aatttggcggcgtacggctataattcaccggactgtccggtggtgcaccgaactgtccgg 154972 
AC203887.4 >7981    ............................................................ 8040   

AC212129.5 >154973  tgagccaacggccgccagagcaacggtcggtcgcgcaatccgcgggcgacgcgtggcctg 155032 
AC203887.4 >8041    ............................................................ 8100   

AC212129.5 >155033  cgccaacggtcggcagggggcaccggactgtccagtgcgccaaccagcctagagttgcaa 155092 
AC203887.4 >8101    ............................................................ 8160   

AC212129.5 >155093  tggtcggctgcgctagaataggaaggagatcgtgcaccggacatgaacagtggttgtccg 155152 
AC203887.4 >8161    ............................................................ 8220   

AC212129.5 >155153  gtggtgcaccggactgtccggtgcgccacccgatagaaggtaagaattgccttccttgtt 155212 
AC203887.4 >8221    ............................................................ 8280   

AC212129.5 >155213  ggcctcaaacggctcctagctgccttggggctataaaagagacccctaggcacatggaag 155272 
AC203887.4 >8281    ............................................................ 8340   

AC212129.5 >155273  agctacacaagcattcactaagcaatctaatactctcacactccgtcttcgcgcacttga 155332 
AC203887.4 >8341    ............................................................ 8400   

AC212129.5 >155333  tcgatcgtgtttgtgatttgagatctgttctagttgtgaactctctgtgttccattttga 155392 
AC203887.4 >8401    ............................................................ 8460   

AC212129.5 >155393  gctcaagtcctggcttgtgtgtgtgtgctgcggatttgtgtgtgttgctccccaacctta 155452 
AC203887.4 >8461    ............................................................ 8520   

AC212129.5 >155453  ctcttgtgctttctttgtgatcaatcttgtaagggcgagaggctccaacttgtggagatt 155512 
AC203887.4 >8521    ............................................................ 8580   

AC212129.5 >155513  cctcgcaaatgggaaaagatataaggaagaaaagtcgtggtattcaagttgatctttgga 155572 
AC203887.4 >8581    ............................................................ 8640   

AC212129.5 >155573  tcacttgaaaggggttgagtgcaaccctcgtccattgggacgccacaacgtggaggtagg 155632 
AC203887.4 >8641    ............................................................ 8700   

AC212129.5 >155633  caagtgttatacttggccgaaccacgggataaaccactgtctcttgtgctatctttctct 155692 
AC203887.4 >8701    ............................................................ 8760   

AC212129.5 >155693  gtgattattgtgatttgcaagagctcgccctatagccacatggttcaattgcactagcat 155752 
AC203887.4 >8761    ............................................................ 8820   

AC212129.5 >155753  ctttataaccaagcttgtggctatttagtgttgaattttacaggatcacctattcacccc 155812 
AC203887.4 >8821    ............................................................ 8880   

AC212129.5 >155813  ccccccccccctctaggtgctttcaaaatcaaccaagaaaataaagcggatgacacggtg 155872 
AC203887.4 >8881    ............................................................ 8940   

AC212129.5 >155873  atttgttttaccgaggttcggttccaaagaacctagtccccgttgaggtggtcacaaaga 155932 
AC203887.4 >8941    ............................................................ 9000   

AC212129.5 >155933  ctgggtctctttcaaccctttccctctctcaaatgatcacttagaccgagtgagctttct 155992 
AC203887.4 >9001    ............................................................ 9060   

AC212129.5 >155993  tccttgatttcccgggtcacttagaccccgcaaggaccaccacacaattggtgtcttttg 156052 
AC203887.4 >9061    ............................................................ 9120   

AC212129.5 >156053  cttcgcttacaaggctttgagaataagaatgagagaaagaagaaagccaaccaagcaaca 156112 
AC203887.4 >9121    ............................................................ 9180   

AC212129.5 >156113  agagcaacaaagaaacacaagaacgatcctctctcaagtcataaaacactagagttgatt 156172 
AC203887.4 >9181    ............................................................ 9240   

AC212129.5 >156173  tggggacttcgatcgtatcggtggctttgatttgtgtcttggagtgttgcgctttgctct 156232 
AC203887.4 >9241    ............................................................ 9300   

AC212129.5 >156233  tgtatgaatggaatgtgataaatgcttggatggttggagtggataaagataaatgatttg 156292 
AC203887.4 >9301    ............................................................ 9360   

AC212129.5 >156293  atttatagccctcaaccaccaattcaacagttggggttggctgctgtcgatgggcgcacc 156352 
AC203887.4 >9361    ............................................................ 9420   

AC212129.5 >156353  taggggtggtaatggatcacgatccaaatgcctcttcacaaaatttaaggcccttaaata 156412 
AC203887.4 >9421    ............................................................ 9480   

AC212129.5 >156413  atattagtttaaaaatgaataagaatagagcccgaccctaatccgattcaatccttaaaa 156472 
AC203887.4 >9481    ............................................................ 9540   

AC212129.5 >156473  tttgcagtgtaaagtttatagcccattaccacccctaggcgcaccggacagtccggtgcg 156532 
AC203887.4 >9541    ............................................................ 9600   

AC212129.5 >156533  ccagccacgtcacccaaccgttagggttctgacgcagtcggccgttgaagcgctgacttc 156592 
AC203887.4 >9601    ............................................................ 9660   

AC212129.5 >156593  tggttgcaccgaacagttcggtgccacaccggacaggcactgttcactgtccggtgtgcc 156652 
AC203887.4 >9661    ............................................................ 9720   

AC212129.5 >156653  tctggcttctgctctgacttctgcgcgaactgttcgcgcactgtagtgtagcaggcgacc 156712 
AC203887.4 >9721    ............................................................ 9780   

AC212129.5 >156713  gttgcagccgaccgttgcgctggctagccgttgctccgccggtgcaccggacagtccggt 156772 
AC203887.4 >9781    ............................................................ 9840   

AC212129.5 >156773  gaattatagcagagcgcggccttagaaactcgaaggtgaagagttcagactcgtacggcc 156832 
AC203887.4 >9841    ........................t................................... 9900   

AC212129.5 >156833  ctggtgcaccggacagtccggtgcgccagaccagggtgctc-ttcggtttcttttgctcc 156891 
AC203887.4 >9901    .........................................t.................. 9960   

AC212129.5 >156892  tttcttttgaaccctaactttatctttttattggtttgtgttgaacctttatgcacctgt 156951 
AC203887.4 >9961    ............................................................ 10020  

AC212129.5 >156952  agaatatataatctagagcaaactagttagtccaattatttgtattggacattcaaccac 157011 
AC203887.4 >10021   ............................................................ 10080  

AC212129.5 >157012  caaaattatttatagg-aaaagtttaaccctatttccctttcaaaaaacaaactaaattt 157070 
AC203887.4 >10081   ................a........................................... 10140  

AC212129.5 >157071  gctgaaatttagagaag-aaaatctaaaaactagataagataaaatgagcctgtgcggtg 157129 
AC203887.4 >10141   .................a.......................................... 10200  

AC212129.5 >157130  tgtggagggcaaagca-ggcccatccagcccatcaagatgcagcaaccgccatatgcggt 157188 
AC203887.4 >10201   ................g........................................... 10260  

AC212129.5 >157189  tagggttaaaccatgcgactgtcgcttctcctgtgtaggttgcgtcgccgccacgctttc 157248 
AC203887.4 >10261   ............................................................ 10320  

AC212129.5 >157249  cagtgtaacgcctctgtgccatcgtaccctggccgaggctgcaccgctggctctctggcc 157308 
AC203887.4 >10321   ............................................................ 10380  

AC212129.5 >157309  gaggtcgcgccgccgctgccttgcggaggctacaatgccacgccctggttgaagccacgt 157368 
AC203887.4 >10381   ............................................................ 10440  

AC212129.5 >157369  cactgaagaagcatcgagtacgcgccgccacgggcccagccaaggtcgcgcgcctgcgag 157428 
AC203887.4 >10441   ............................................................ 10500  

AC212129.5 >157429  acgtggtgagggcgcgccgacgcgggccctaatgagcccgtgtgcctatgagtcgcgacg 157488 
AC203887.4 >10501   ............................................................ 10560  

AC212129.5 >157489  aggccgctccgccgcgggtcgtgccaaggacacggcttggcctccccacaaaggtcggga 157548 
AC203887.4 >10561   ............................................................ 10620  

AC212129.5 >157549  ccacgccgcggtcgtgctgctgcgcgccaaggacacgcttcaggggagacagcgaggggg 157608 
AC203887.4 >10621   ............................................................ 10680  

AC212129.5 >157609  caagcgtgagcgctcgcggcaagtgtcgtcattggatggtctcgctgccacaaaccatga 157668 
AC203887.4 >10681   ............................................................ 10740  

AC212129.5 >157669  ccttgtcacggccgatacctaagcacaaccacgacggaggagacaggaggcggaatgtgg 157728 
AC203887.4 >10741   ............................................................ 10800  

AC212129.5 >157729  gtgtgttgcgtatgtaatgtttgaattgattgtaactgagttgggagtgggccgcgacgg 157788 
AC203887.4 >10801   ............................................................ 10860  

AC212129.5 >157789  cgggtgtgagtggctcggactgtttggacgcctatataggctgtcgggatgtaacaacga 157848 
AC203887.4 >10861   ............................................................ 10920  

AC212129.5 >157849  aggacatcgaatgaataatagaaacctttccagaatactgtcatccttgtcatcctgagt 157908 
AC203887.4 >10921   ............................................................ 10980  

AC212129.5 >157909  ctttcttaggtacgacaacgagctcacgtcccgacgacgatcgccggtggccaggggcgt 157968 
AC203887.4 >10981   ............................................................ 11040  

AC212129.5 >157969  gacaagtggtatcaaagctcgtctatccttgggcccatttgcgacagcgagttcgcagat 158028 
AC203887.4 >11041   ............................................................ 11100  

AC212129.5 >158029  cccatcaatcgagttggcgaacaggaggcgaaggcggatgacggatctcgatttgggttg 158088 
AC203887.4 >11101   ............................................................ 11160  

AC212129.5 >158089  cgcagcaagtttgcgtgtaaaattccttgatcaatccagtggaccatttccggcggcggg 158148 
AC203887.4 >11161   ............................................................ 11220  

AC212129.5 >158149  cggagcgggacacgctccctcggcgacgctctatctcgacgttgactccacctcgaagac 158208 
AC203887.4 >11221   ............................................................ 11280  

AC212129.5 >158209  cagggtcttcacgcacaggttcattcgtcgaccgtcaacgttcggcaacgcgtcttcgtt 158268 
AC203887.4 >11281   ............................................................ 11340  

AC212129.5 >158269  gctcgtcgactttcgtcgggtggtcggcttggtgttttctggcagcgcaacggaagcgtg 158328 
AC203887.4 >11341   ............................................................ 11400  

AC212129.5 >158329  gtgtggcaggagaaacagtgcctgcaacctgttcgacgaattgcctaggtgtcgttcact 158388 
AC203887.4 >11401   ............................................................ 11460  

AC212129.5 >158389  tggctgggtcttcggcgcgggcttcattctccatcgacgactcgtggcgtcgacagcgca 158448 
AC203887.4 >11461   ............................................................ 11520  

AC212129.5 >158449  tcctcaacgttcatcgatctctagtggacgtccggtcggtggtgtaggctgcagcgacca 158508 
AC203887.4 >11521   ............................................................ 11580  

AC212129.5 >158509  gtgaagtcgacggtgtgggcataacttcagttctcggccatggtgacatttgaacagaag 158568 
AC203887.4 >11581   ............................................................ 11640  

AC212129.5 >158569  ggtgttgagcggtgggagaagaggatggagatgttggatcggttgggaagtagactggag 158628 
AC203887.4 >11641   ............................................................ 11700  

AC212129.5 >158629  gtgatggaggcagatcaacttcgactcaaggagcaggcggatcgcgtagccacagcgacg 158688 
AC203887.4 >11701   ............................................................ 11760  

AC212129.5 >158689  agaaaggtggaggcgatgtcgtcgaaaaaaaagatgaaggggacactggagtggttcaac 158748 
AC203887.4 >11761   ............................................................ 11820  

AC212129.5 >158749  gctaccacaggttccggattcgtcacttcagtcgaccatggcgagttcctgtattttcta 158808 
AC203887.4 >11821   ............................................................ 11880  

AC212129.5 >158809  caaccgtccctcaagtcccatgagctctcaggtgaccagaaccttaagatcggtgaggca 158868 
AC203887.4 >11881   ............................................................ 11940  

AC212129.5 >158869  gtcgagttcggcatcatgggggacaggtatggctatctcagggcctttgacattacacct 158928 
AC203887.4 >11941   ............................................................ 12000  

AC212129.5 >158929  cttggaggtggcatgctctctggtggttttgacatctatgccagttggaacaacaacctg 158988 
AC203887.4 >12001   ............................................................ 12060  

AC212129.5 >158989  gattgggttgttgagaacagcgacgatgaccatagtggccacagctgcggtccagtgctg 159048 
AC203887.4 >12061   ............................................................ 12120  

AC212129.5 >159049  cttgaaagtatggaccctccggtgtttgatgaaatgtctcacccctgtagtgaggtgggt 159108 
AC203887.4 >12121   ............................................................ 12180  

AC212129.5 >159109  gatgttgttccgatgttccctgaaggttcagattcttcggtgttcgatgaaatgccgatg 159168 
AC203887.4 >12181   ............................................................ 12240  

AC212129.5 >159169  gagtgtgtgatctgggatatgggataaggaatctgggcatgaaagtggggtgaatctgga 159228 
AC203887.4 >12241   ............................................................ 12300  

AC212129.5 >159229  agggaaggatgaccaggcgcacatcaattgcgagcaggatgttgtacatgatgctctttg 159288 
AC203887.4 >12301   ............................................................ 12360  

AC212129.5 >159289  gatgttggttggaatgtcccatcaggccagtatacaaccggtgttcaatgtagtgggtct 159348 
AC203887.4 >12361   ............................................................ 12420  

AC212129.5 >159349  tacggcagcatgggatgaggagatgcaatctaaaactcacatgcaagaaggtttactgaa 159408 
AC203887.4 >12421   ............................................................ 12480  

AC212129.5 >159409  gcagcttgctcaaggtggagaagatttaaaagaatcagctagcaagggtgctcatgttga 159468 
AC203887.4 >12481   ............................................................ 12540  

AC212129.5 >159469  aggtgaagctagttggcctgacccaacgagtgaggcaactgaggtgattaagaatggtgg 159528 
AC203887.4 >12541   ............................................................ 12600  

AC212129.5 >159529  aagcatggaggattttcttcctgctagcgcttgcagtgtgcttgggggaagactggagaa 159588 
AC203887.4 >12601   ............................................................ 12660  

AC212129.5 >159589  ggaacagaatgctgaaggtcgggtcgctgttagtaaagtgaaggagttggtagaaggctt 159648 
AC203887.4 >12661   ............................................................ 12720  

AC212129.5 >159649  ctctagtggtagtgtctctcgagactttatcagtagcagggttgggcagatgatatttga 159708 
AC203887.4 >12721   ............................................................ 12780  

AC212129.5 >159709  tgaatctgaagggttgttgatgagtggtccatatggagattatgttcaatacaagaatgg 159768 
AC203887.4 >12781   ............................................................ 12840  

AC212129.5 >159769  tgaacccacaaaatagtttgctgagtgcgatggtgtgagaatcctctctaactcaagtat 159828 
AC203887.4 >12841   ............................................................ 12900  

AC212129.5 >159829  gatagttatacaccgagtctcagtctttattacatcatctgttggcattggaaacaagat 159888 
AC203887.4 >12901   ............................................................ 12960  

AC212129.5 >159889  tccagcagcattactgtacaacgttcgtgatcactatggcaggcagaacaaaggcagtgt 159948 
AC203887.4 >12961   ............................................................ 13020  

AC212129.5 >159949  gcaacttggaataaccggattgacacaatggtggctcaatgcttttagctcaggaaacag 160008 
AC203887.4 >13021   ............................................................ 13080  

AC212129.5 >160009  tggtatggcagttcagtcacagccaaacattcaaaggaactccatgaacaaattaagggg 160068 
AC203887.4 >13081   ............................................................ 13140  

AC212129.5 >160069  attatcgtttagaatggtgtacgataaaggcaaggagaatatagtggctgatacattttc 160128 
AC203887.4 >13141   ............................................................ 13200  

AC212129.5 >160129  acaagggggttcaattatggctacgtatggtgaccttgttgttcaaatagatatacctaa 160188 
AC203887.4 >13201   ............................................................ 13260  

AC212129.5 >160189  atttgttgtgactaattcctatgctctggatatgttgccaatagtgaccatccacagtcc 160248 
AC203887.4 >13261   ............................................................ 13320  

AC212129.5 >160249  acatggggctgtgtactcagttcagtggggcaaagttaaaaggctccatcagtttgggaa 160308 
AC203887.4 >13321   ............................................................ 13380  

AC212129.5 >160309  gcagtgtttagtttctgagcaagcgaaagaagagcaacagctatttggtgggttctggca 160368 
AC203887.4 >13381   ............................................................ 13440  

AC212129.5 >160369  tttgttttcagtgctacaggggatttgggagggcctaaagtcagattttcttgaggattt 160428 
AC203887.4 >13441   ............................................................ 13500  

AC212129.5 >160429  tctcatacctgaaggctatgattttattatgatgcttcagtgtgttgcccaggaccatct 160488 
AC203887.4 >13501   ............................................................ 13560  

AC212129.5 >160489  cccacggtggaaaaccttgctaccatttgttgaactgtggtaccgccctgataagaatgc 160548 
AC203887.4 >13561   ............................................................ 13620  

AC212129.5 >160549  tagcaacccagaagcatcagaactcttcaaagaagttgcatattcttataacatcttgtc 160608 
AC203887.4 >13621   ............................................................ 13680  

AC212129.5 >160609  agatccagagaaacaaaggcagtatgataatgttgaatttgaagcattagaaaatgaagg 160668 
AC203887.4 >13681   ............................................................ 13740  

AC212129.5 >160669  agtggatatggaaattgaattgtcccatcttggaactgtgaacaaatgtttgcagcatgt 160728 
AC203887.4 >13741   ............................................................ 13800  

AC212129.5 >160729  ttttttgcaaacttggtgttcctctgaagaccataatattttctactgtgctggaaaagg 160788 
AC203887.4 >13801   ............................................................ 13860  

AC212129.5 >160789  ccatgaatggtacagttacggtgagaccactccctgttggaacatcagctatgggaaaag 160848 
AC203887.4 >13861   ............................................................ 13920  

AC212129.5 >160849  ttgataagcaatgtgctcattttttttggcgtaccaataaatgaagaacaagcacattct 160908 
AC203887.4 >13921   ............................................................ 13980  

AC212129.5 >160909  ggaaggaagatagtcaaaagactggcaagctaacatcggcacgcatgtatttcttgcata 160968 
AC203887.4 >13981   ............................................................ 14040  

AC212129.5 >160969  ttcagagatggttgtttggactaaaaaaagaaatggctagggctcaatggcactacaatg 161028 
AC203887.4 >14041   ............................................................ 14100  

AC212129.5 >161029  cagcgaaggcttgtttcttttctattgccttgcttggggacaagcaagttttggcgagga 161088 
AC203887.4 >14101   ............................................................ 14160  

AC212129.5 >161089  ggcatatgtcacggccgatacctaagcacaaccacgacggaggagacaggaggcggaatg 161148 
AC203887.4 >14161   ............................................................ 14220  

AC212129.5 >161149  tgggtgtgtggcgtatgtaatgtttgaattgattgtaactgagttgggagtgggccgcga 161208 
AC203887.4 >14221   ............................................................ 14280  

AC212129.5 >161209  cggcgggtgtgagtggcccggactgtttggacgcctatataggctgccgggatgtaacaa 161268 
AC203887.4 >14281   ............................................................ 14340  

AC212129.5 >161269  cgaaggacatcgaatgaataatagaaacatttccagaatactgtcatccttgtcatcctg 161328 
AC203887.4 >14341   ............................................................ 14400  

AC212129.5 >161329  agtctttctcaggtacgacaacgagctcacgtcccgacgacgatcgccggtggccagggg 161388 
AC203887.4 >14401   ............................................................ 14460  

AC212129.5 >161389  tgtgatagacctcgaagtgcgaggctttggggagaggtggtgcaccagctgacataccac 161448 
AC203887.4 >14461   ............................................................ 14520  

AC212129.5 >161449  tcgattgccgctcgggctagagagcgacgacgatgaagtcgttcccgagggaccgacgtc 161508 
AC203887.4 >14521   ............................................................ 14580  

AC212129.5 >161509  gggggtcaggctatacagcctctatggtacctcgtcgcgaaggatcaaagtgatcccctc 161568 
AC203887.4 >14581   ............................................................ 14640  

AC212129.5 >161569  gtcgccggaagaagaagcgtcattaacagccatagaaaaatggagcgatctggctggtgg 161628 
AC203887.4 >14641   ............................................................ 14700  

AC212129.5 >161629  ggcgaccacgagggccagtcgacttctgtaccgtcaatcgtgtccgggcatgagggcgca 161688 
AC203887.4 >14701   ............................................................ 14760  

AC212129.5 >161689  ctagagacaagacttggacgagcagtccgctcgatcgaacaacaacaacggaggtgtctt 161748 
AC203887.4 >14761   ............................................................ 14820  

AC212129.5 >161749  catctggtgaagcctgcggttggcaagcagggcacgacccctatccatggagggggcagt 161808 
AC203887.4 >14821   ............................................................ 14880  

AC212129.5 >161809  accacatcggacagagcggttgctggatctcgaactctcgcaaccggtctgcagcccgct 161868 
AC203887.4 >14881   ............................................................ 14940  

AC212129.5 >161869  acgacaaaggcggtcacacccgttaatcaagacatggcgttggtggttgttgcggcgttg 161928 
AC203887.4 >14941   ............................................................ 15000  

AC212129.5 >161929  ctggggccgacgccgagatcgccaccagtccggcgaacacgctcagggtcaaatgtggct 161988 
AC203887.4 >15001   ............................................................ 15060  

AC212129.5 >161989  cgtgtgtccttggtgtggtgcttcttggcatggcggcagcacgcaaaaggcggcgtgcaa 162048 
AC203887.4 >15061   ............................................................ 15120  

AC212129.5 >162049  cgacatgagcacctcgccgctgatgatgttcgccactcaaagaccgaaagaagaaagtga 162108 
AC203887.4 >15121   ............................................................ 15180  

AC212129.5 >162109  gaagggcaacagagaaatctttgaagaacattgtatacccgatggttttcctcctcccta 162168 
AC203887.4 >15181   ............................................................ 15240  

AC212129.5 >162169  ttattgtcgtcagtgaaaccttctggcttgccttcggttcttgtgcgatggagttctttg 162228 
AC203887.4 >15241   ............................................................ 15300  

AC212129.5 >162229  gcctttcttccactctggttttgtgaatgtagtgctgataacgtgttacgtgaaactatt 162288 
AC203887.4 >15301   ............................................................ 15360  

AC212129.5 >162289  gtatgagaatggacagcgaatgaatctcgtgccttttctctattgcattaatatttgtac 162348 
AC203887.4 >15361   ............................................................ 15420  

AC212129.5 >162349  aaggattaggaacatgaggagtttaacggcgagggacatgcccactcgcccgttcacggg 162408 
AC203887.4 >15421   ............................................................ 15480  

AC212129.5 >162409  aaaggcggcaacgttaggggtcacgacccttgagaatagcaactgagagcagtttgctaa 162468 
AC203887.4 >15481   ............................................................ 15540  

AC212129.5 >162469  atgcttacgctaaatgcttagactttgcaactcttcacctttttcacttaggtaatacca 162528 
AC203887.4 >15541   ............................................................ 15600  

AC212129.5 >162529  ttttttcaaggtattttcgtctttttacgtaaattagcttatttactcaagaaaaaatag 162588 
AC203887.4 >15601   ............................................................ 15660  

AC212129.5 >162589  aatcccttgaaaaaatagagttgtcaaactagctataaactagaagtatcccagcccaaa 162648 
AC203887.4 >15661   ............................................................ 15720  

AC212129.5 >162649  agatatcaaaacgcatttttaaatataaaataatcatatatgacgtccatttacgcatat 162708 
AC203887.4 >15721   ............................................................ 15780  

AC212129.5 >162709  gcagcaaacttgataactaaagtttaataattacattgactaaccagcgaggcaacagac 162768 
AC203887.4 >15781   ............................................................ 15840  

AC212129.5 >162769  ttttggaaactcaaactgctacaatgttttgcgttgagatcgcagaaaccatggagcaag 162828 
AC203887.4 >15841   ............................................................ 15900  

AC212129.5 >162829  ataaaagagcgaattgatgaaaaccaaagcattaaaagagcgaaatatttttttttgtgg 162888 
AC203887.4 >15901   ............................................................ 15960  

AC212129.5 >162889  ggacgggtgggatcaaatgtgtaaaaaaaactcgcaaaaaaaggtggcgtcagaaagcaa 162948 
AC203887.4 >15961   ............................................................ 16020  

AC212129.5 >162949  gataactaagatctgccgaaataaatactcaacattgcgagtcaatggaaagcacatgta 163008 
AC203887.4 >16021   ............................................................ 16080  

AC212129.5 >163009  actttgacaaggaccaaacaagaacaaagacaacttagcgaatgccaatatataagttaa 163068 
AC203887.4 >16081   ............................................................ 16140  

AC212129.5 >163069  agagaaacagttggcgtccatagagtgatgtaaaatgtaaatacatagaaacttgttaaa 163128 
AC203887.4 >16141   ............................................................ 16200  

AC212129.5 >163129  cagataacatggaacttgtacaaaaaaacagctggattcagcacaactttgtcattcaga 163188 
AC203887.4 >16201   ............................................................ 16260  

AC212129.5 >163189  ctcagttccaaattctggttagaacaccacccagcgagttaacgtgacatcacaccagaa 163248 
AC203887.4 >16261   ............................................................ 16320  

AC212129.5 >163249  atttccagcgcctgatgaaattttactacataaactgaatttagataacaataaacagca 163308 
AC203887.4 >16321   ............................................................ 16380  

AC212129.5 >163309  atctggaaaagactaaccacagctaaccaaagcaactcgacattttctccacacaaccca 163368 
AC203887.4 >16381   ............................................................ 16440  

AC212129.5 >163369  agataaaaggtcagtaggtcacagcaccacaaaattacttagatatgcaagtctatgcga 163428 
AC203887.4 >16441   ............................................................ 16500  

AC212129.5 >163429  aacctagtataaacgtgcgtgtcagtaggatgctacatcccaaacatcatagtgaaggaa 163488 
AC203887.4 >16501   ............................................................ 16560  

AC212129.5 >163489  acaagtgtgcatcacacctatacccaacaccaagaatgaaattggtcttaatcctgaaca 163548 
AC203887.4 >16561   ............................................................ 16620  

AC212129.5 >163549  tcagtgacccagacagaatgagcaaataaaagcatgattcctctaccccttaaagctcca 163608 
AC203887.4 >16621   ............................................................ 16680  

AC212129.5 >163609  gtcggcagtgatgggctgatggcttcaccacgacaccaccccaccctaccatgtctagtc 163668 
AC203887.4 >16681   ............................................................ 16740  

AC212129.5 >163669  actatacatggtctacctgatgcatgattgtatcaacatgtatacatgtagtaatagcct 163728 
AC203887.4 >16741   ............................................................ 16800  

AC212129.5 >163729  aatgcttcttttccttctaacactggtcagagtatcattggaactgcaagtaatagccta 163788 
AC203887.4 >16801   ............................................................ 16860  

AC212129.5 >163789  atggtgtgtttggtttgtggagtcactctatgcttcatgaggtgatgcatcataagttca 163848 
AC203887.4 >16861   ............................................................ 16920  

AC212129.5 >163849  tttcatcaattttggtggaatcaacccactcctcatgtatatactaattattagcttatg 163908 
AC203887.4 >16921   ............................................................ 16980  

AC212129.5 >163909  aggaatggggtggtgatggatcaacccattctattccacaaaccaaataaaaaagtgagg 163968 
AC203887.4 >16981   ............................................................ 17040  

AC212129.5 >163969  agtgagaagaagatggattacttcattcctcacaccaaacacactataagtttgtgaact 164028 
AC203887.4 >17041   ............................................................ 17100  

AC212129.5 >164029  aaacctggagtccattaaagtcctttgatgttacaaactgtgtgcatttcatcctaggtg 164088 
AC203887.4 >17101   ............................................................ 17160  

AC212129.5 >164089  gaagatgatttctgcaaatattaattgtatctcaaatcaccagctggtttgctgattcca 164148 
AC203887.4 >17161   ............................................................ 17220  

AC212129.5 >164149  tatgtgaaagaaggtggcacaggatttctttttcttcagtcaatatcataaataagttac 164208 
AC203887.4 >17221   ............................................................ 17280  

AC212129.5 >164209  tgaaagtaatgattaatatcagtctagccccctaggcatcgtaaattatcgagtgcctga 164268 
AC203887.4 >17281   ............................................................ 17340  

AC212129.5 >164269  aattgttttctgatatgagaacctattaatcagataatattgactgctgcacaaacctga 164328 
AC203887.4 >17341   ............................................................ 17400  

AC212129.5 >164329  aactaagaaggaatgctttagcagattttccaatcaatatgttaccaacttgtttttgtt 164388 
AC203887.4 >17401   ............................................................ 17460  

AC212129.5 >164389  gaggcgttgatcatatcatcctgaggaacataaaaagcttgtgcacatggagctaatctg 164448 
AC203887.4 >17461   ............................................................ 17520  

AC212129.5 >164449  ccaataacccaaattcaaatcaacaaagtggcacagtatacagcagctaagtgtccacaa 164508 
AC203887.4 >17521   ............................................................ 17580  

AC212129.5 >164509  aagtgaaagaaaaaataaataagagtagcattatgcagcaagcacatggcaattatgccc 164568 
AC203887.4 >17581   ............................................................ 17640  

AC212129.5 >164569  acattcagattcagtacttggtcttagttattattatttctttccaataaacaagtaaag 164628 
AC203887.4 >17641   ............................................................ 17700  

AC212129.5 >164629  atattgtgcaaggttattttttaacagcgtatgcgataacacaacatcatacactagtaa 164688 
AC203887.4 >17701   ............................................................ 17760  

AC212129.5 >164689  agaaacatgagaatatcatttcacacaatgaaaaaaaaggaagcagatgctcacataaca 164748 
AC203887.4 >17761   ............................................................ 17820  

AC212129.5 >164749  aaacatatccttttcagggttatggttcgcgtacaaatctgtagaagcaaacattaccag 164808 
AC203887.4 >17821   ............................................................ 17880  

AC212129.5 >164809  ataactggctgctaagcctgaattc 164833 
AC203887.4 >17881   ......................... 17905  



Events
IdTypeDateWhodidComment
296421InitHasAlign01/15/2014 17:42:58cgi_chen
find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Aug  1 2013. Toolkit wrapper  using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib
Info: Blast Including ID: 545256211
Info: Running Blast Filter: 0
Info: Determined ID: gi|545256211 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545256211 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545256211 needs Merging.
Info: Best Rank: 1 in  for 545256211 of 1
Info:  NG returned 1 alignments

tpf_solo for TPF_updated_1_v2
381463CreateSwitchPt12/19/2014 15:59:48chenhc
tpf_m_BuilderId: t Toolkit wrapper version: built Nov 13 2014 using /home/boukn/code/toolkit/c++/GCC481-ReleaseMT64/lib



down arrow BAC Ends
CloneRF
Accession%idPosition (strand) Accession%idPosition (strand)
CH201-115H21AC203887.4100%pos 181875 (R-)  
CH201-119I9 AC212129.5100%pos 13413 (F+)
 AC212129.5100%pos 13473 (F+)
CH201-12F4AC212129.5100%pos 96542 (R+)  
CH201-145F21AC203887.498.61%pos 181449 (R-)  
CH201-146J20AC203887.499.72%pos 75670 (R-)  
CH201-170O11AC212129.5100%pos 164712 (R-)  
AC212129.599.21%pos 164435 (R-)  
AC212129.5100%pos 164213 (R-)  
AC203887.4100%pos 17285 (R-)  
AC203887.499.21%pos 17507 (R-)  
AC203887.4100%pos 17784 (R-)  
CH201-170P11AC203887.499.57%pos 17204 (R-)  
AC212129.599.57%pos 164132 (R-)  
CH201-199H19AC212129.5100%pos 99136 (R+)  
CH201-212B20 AC203887.499.82%pos 159084 (F+)
CH201-269B3AC203887.4100%pos 19835 (R+)  
CH201-294F2 AC203887.4100%pos 157607 (F+)
 AC203887.499.76%pos 157178 (F+)
CH201-313A16AC212129.5100%pos 12733 (R+)  
AC212129.599.31%pos 12644 (R+)  
CH201-357N5AC212129.5100%pos 106249 (R-)  
CH201-374J24 AC203887.4100%pos 130655 (F+)
CH201-400M8 AC203887.4100%pos 68075 (F-)
 AC203887.4100%pos 67958 (F-)
CH201-415P13AC203887.497.47%pos 180514 (R+)  
CH201-473A6 AC203887.4100%pos 171605 (F+)
CH201-493G8 AC203887.499.29%pos 180359 (F-)
CH201-501M16AC203887.499.7%pos 64817 (R+)  
AC203887.4100%pos 64419 (R+)  
CH201-512I12 AC203887.499.65%pos 67697 (F-)
CH201-549K7AC203887.4100%pos 58889 (R+)  
AC203887.4100%pos 58709 (R+)  
CH201-574J10 AC212129.5100%pos 13999 (F+)
CH201-69K4AC203887.4100%pos 17101 (R-) AC212129.599.5%pos 580 (F+)
AC203887.4100%pos 17348 (R-)  
AC212129.5100%pos 164029 (R-)  
AC212129.5100%pos 164276 (R-)  
ZMMBBb-170P5AC203887.499.14%pos 163899 (R+)  
ZMMBBb-223G5AC203887.498.44%pos 173909 (R-)  
ZMMBBb-228A1 AC203887.498.5%pos 164413 (F+)
ZMMBBb-313E7AC203887.499.41%pos 174267 (R+)  
ZMMBBb-377G8AC203887.499.17%pos 59359 (R+)  
ZMMBBb-396N14 AC212129.597.08%pos 118568 (F-)
ZMMBBb-411B16AC212129.598.74%pos 134334 (R+)  
ZMMBBb-418F9AC203887.498.51%pos 174300 (R+)  
ZMMBBb-444L22AC203887.499.02%pos 174295 (R+)  
ZMMBBb-460O20 AC203887.498.45%pos 174206 (F+)
ZMMBBb-461K18 AC203887.498.36%pos 173909 (F-)
ZMMBBb-546E9AC203887.498.23%pos 162281 (R+)  
ZMMBBb-550P8AC203887.499.59%pos 174316 (R+)  
ZMMBBb-565O7AC212129.597.31%pos 131026 (R-)  
ZMMBBb-623I3 AC212129.598.65%pos 10873 (F+)
ZMMBBb-624P8 AC203887.498.94%pos 60874 (F-)
ZMMBBb-635D1 AC203887.499.59%pos 174259 (F+)
ZMMBBb-635J1 AC203887.498.74%pos 174210 (F+)
ZMMBBb-91H4AC203887.497.78%pos 94228 (R+)  
ZMMBBb-94A12AC203887.498.83%pos 164358 (R+)  

down arrow Fosmid Ends
CloneRF
Accession%idPosition (strand) Accession%idPosition (strand)
Z_AI-1036G4AC212129.598.04%pos 12892 (R-)  
Z_AI-1043N19 AC203887.498.58%pos 178277 (F-)
Z_AI-1049A1 AC203887.499.6%pos 164180 (F+)
Z_AI-1054F1 AC212129.599.55%pos 11801 (F-)
Z_AI-1066A12AC203887.499.45%pos 159479 (R+)  
Z_AI-1076L4AC212129.5100%pos 76460 (R+)  
Z_AI-1133L12 AC203887.4100%pos 172760 (F+)
Z_AI-1146H9AC212129.599.34%pos 17721 (R-)  
Z_AI-1166F9AC203887.498.51%pos 109391 (R-)  
Z_AI-1206F1 AC203887.4100%pos 179391 (F+)
Z_AI-1238C20 AC212129.5100%pos 94092 (F-)
Z_AI-1249N23AC203887.498.75%pos 180357 (R+)  
Z_AI-1259H15 AC203887.4100%pos 23306 (F-)
Z_AI-1270K6AC203887.4100%pos 146670 (R-)  
Z_AI-1316O13AC203887.4100%pos 178972 (R-)  
Z_AI-1381N22AC203887.4100%pos 106300 (R+)  
Z_AI-1382N10AC203887.498.55%pos 175980 (R+)  
AC203887.498.55%pos 176308 (R+)  
Z_AI-1408K15AC212129.5100%pos 25420 (R+)  
Z_AI-1434K18AC212129.5100%pos 78980 (R-)  
Z_AI-1435B14AC203887.4100%pos 173084 (R-)  
Z_AI-1453H4AC212129.599.81%pos 76905 (R-)  
Z_AI-1463M1AC203887.497.32%pos 106710 (R-)  
Z_AI-1486B12 AC203887.499.71%pos 180487 (F-)
Z_AI-14N16 AC203887.4100%pos 25652 (F-)
Z_AI-316O18AC203887.499.46%pos 147223 (R-)  
Z_AI-318G9 AC212129.5100%pos 117467 (F-)
Z_AI-355E13AC203887.499.05%pos 76520 (R-)  
Z_AI-360A1AC212129.5100%pos 137463 (R-)  
Z_AI-380D24AC212129.599.85%pos 160422 (R+)  
AC203887.499.85%pos 13494 (R+)  
Z_AI-383L17 AC212129.599.63%pos 99234 (F-)
Z_AI-387B9AC212129.5100%pos 99573 (R+)  
Z_AI-409J16 AC203887.499.85%pos 181450 (F+)
Z_AI-478K8AC203887.4100%pos 67100 (R+)  
Z_AI-515M10AC212129.599.86%pos 75693 (R+) AC212129.5100%pos 117396 (F-)
Z_AI-546M11AC203887.4100%pos 159504 (R+)  
Z_AI-57H12 AC203887.4100%pos 174368 (F+)
Z_AI-660E3 AC212129.5100%pos 9712 (F+)
Z_AI-680K7 AC212129.5100%pos 4154 (F-)
Z_AI-687D10 AC212129.5100%pos 75847 (F-)
Z_AI-688G17 AC203887.4100%pos 61175 (F+)
Z_AI-699N12AC212129.5100%pos 7324 (R+)  
Z_AI-713A1 AC212129.5100%pos 9383 (F-)
Z_AI-713M5 AC203887.497.96%pos 176896 (F+)
Z_AI-751A12AC212129.5100%pos 116333 (R+)  
Z_AI-760C11 AC212129.5100%pos 116402 (F-)
Z_AI-782A24AC212129.5100%pos 14226 (R+)  
Z_AI-795J23 AC203887.4100%pos 175793 (F+)
Z_AI-821K14AC203887.499.74%pos 157095 (R+)  
Z_AI-842E12AC212129.599.85%pos 96580 (R+)  
Z_AI-864P24 AC203887.497.67%pos 163838 (F+)
Z_AI-872K8 AC203887.4100%pos 66680 (F-)
Z_AI-890C11 AC203887.499.86%pos 166496 (F+)
Z_AI-938L10AC203887.499.47%pos 28651 (R-)  
Z_AI-952G3AC203887.498.17%pos 74445 (R+)  
Z_AI-952H9 AC212129.5100%pos 118562 (F-)
Z_AI-956B16 AC203887.499.48%pos 146255 (F-)
Z_AI-956J8 AC203887.497.94%pos 180756 (F-)
Z_AI-991P9 AC203887.498.51%pos 176135 (F+)

down arrow Repeats
acc start stop repeat id strand name family class