Alignment last updated: 12/19/2014 16:01:22
Alignment for AC204414.4 and AC211265.5
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AC204414.4 Zea mays chromosome 1 clone CH201-284L24, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces [htgs_limited_order]
Length: 188,132 bp
AC211265.5 Zea mays chromosome 1 clone CH201-67H15, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces [htgs_limited_order]
Length: 193,165 bp
Alignment Summary
Join evaluation: (>0 gap of 50bp or more, not simple sequence) Alignment count: 1
|
Type | Point1 | Point2 | Orient1 | Orient2 | Curator | Comment | Time | Id | Alignment | Releases |
A | 188112 | 6240 | + | + | chenhc | Taxid 4577 chrom 1 Primary assembly | 2014-12-19 16:01:22.546 | 121543 | 120644 |
Alignment 1 of 1
AC204414.4 : + : 181419..188112 AC211265.5 : + : 1..6239 Mismatches = 6, Gaps = 13, Length = 6700 Percent identity = 99.9% Score = 9321 bits (5047), Expect = 0 5 BAC and 0 Fosmid bridging clones. 5 BAC and 0 Fosmid concordant clones. 0 BAC and 0 Fosmid discordant clones. AC204414.4 >181419 gaattctgcatatggtaatctcttgtcccaacctatcctgtcttgcaaagcacaagccct 181478 AC211265.5 >1 ............................................................ 60 AC204414.4 >181479 caacatatcctccagaatctgattagttctctctgtttgaccatctatctgcgggtgata 181538 AC211265.5 >61 ............................................................ 120 AC204414.4 >181539 agctgagctaaacttcaagtgtgtgcccaaagcttcatgcaactgctgcaaaaaaatgag 181598 AC211265.5 >121 ............................................................ 180 AC204414.4 >181599 aggtgaactgggtgcctctatctaatactatcttcttcggaatgtcatgcaagcacacaa 181658 AC211265.5 >181 ............................................................ 240 AC204414.4 >181659 tccgagccatgtatagttcgactaacaccgtactgttgtaggtggtcttgactggtatga 181718 AC211265.5 >241 ............................................................ 300 AC204414.4 >181719 aatgggccgcttttgtcaaacggtccactactacccagatagagtcataaccagtacgag 181778 AC211265.5 >301 ............................................................ 360 AC204414.4 >181779 tgcgaggcagaccgactatgaaatccattccgatctcatcccacttccactgaggaatct 181838 AC211265.5 >361 ............................................................ 420 AC204414.4 >181839 gcaatatttgcaacaaacgtgcaggtctctgatgttctgctttaatcctttgacaactgt 181898 AC211265.5 >421 ............................................................ 480 AC204414.4 >181899 cacatacaaccacatactctgctatctcccttttcataccgtaccaccagaatcttttct 181958 AC211265.5 >481 ............................................................ 540 AC204414.4 >181959 tcaggtcttggtacatcttctcactaccaggatgtatagagtatgcagtctcatgagctt 182018 AC211265.5 >541 ............................................................ 600 AC204414.4 >182019 ccttgagaatcagttcccggattgatttgatgtcaggaacacacagtctatccctgaacc 182078 AC211265.5 >601 ............................................................ 660 AC204414.4 >182079 ataccactccttctgtatcttcacggaaatccttgccttttccgtctatgatcagctgcc 182138 AC211265.5 >661 ............................................................ 720 AC204414.4 >182139 ggatctcattgattttctcatcatccttctgacctttcctgatgtcatgctctagagtgg 182198 AC211265.5 >721 ............................................................ 780 AC204414.4 >182199 gttccaactcgattgttactccttgagtgttgttcagaaatccgagattcaatttgtcaa 182258 AC211265.5 >781 ............................................................ 840 AC204414.4 >182259 attccttcgctagctcatacgacatcgggtgagcggccaacatattaaattgactctttc 182318 AC211265.5 >841 ............................................................ 900 AC204414.4 >182319 tgctcagagcatctgcaaccacatttgctttgcctgggtgataatgaatctccagctcat 182378 AC211265.5 >901 ............................................................ 960 AC204414.4 >182379 aatctttggtcaactctagccatcttcgctgcctcatgtttaactctgactgagtgaata 182438 AC211265.5 >961 ............................................................ 1020 AC204414.4 >182439 tgtatttgaggctcttatgatccatgtagatatcacacttctgcccataaagataatgcc 182498 AC211265.5 >1021 ............................................................ 1080 AC204414.4 >182499 tccaggtcttcaatgcatgaaccacgggtgctaattccagatcatgagtaggataattct 182558 AC211265.5 >1081 ............................................................ 1140 AC204414.4 >182559 tctcatgaatcttcaactgtcgggacgagtatgccactactctcccttcctgcatcaaca 182618 AC211265.5 >1141 ............................................................ 1200 AC204414.4 >182619 cacatcctagtctgatatacgaagcgtcacaatacactaagaatggcttgtgaacatctg 182678 AC211265.5 >1201 ............................................................ 1260 AC204414.4 >182679 gcagaatcagtactgatgtagttgtcaacttctccttcaatgtctcaaaggacttgtggc 182738 AC211265.5 >1261 ............................................................ 1320 AC204414.4 >182739 atactggggtccacttgaactcaaccttctttgctaacaaggctatcattggcctggcaa 182798 AC211265.5 >1321 ............................................................ 1380 AC204414.4 >182799 tcttggagaaaccttcaataaaatggcgataataaccggccattccgatgaaactcttga 182858 AC211265.5 >1381 ............................................................ 1440 AC204414.4 >182859 ttcctcggacatcttttggtgctttacagtccaagatagatgttactttcttcggatcca 182918 AC211265.5 >1441 ............................................................ 1500 AC204414.4 >182919 cagccaatccttctcggtttataatgtgacccaagaataggacttcattgatctagaact 182978 AC211265.5 >1501 ............................................................ 1560 AC204414.4 >182979 cgcatttgctaagcttggcatacagctggcaatctcgtagcctctgaagtactttcctga 183038 AC211265.5 >1561 ............................................................ 1620 AC204414.4 >183039 aatgctcctcatgctcttgctcattctgggaatatataagaatatcatcaatgaacacta 183098 AC211265.5 >1621 ............................................................ 1680 AC204414.4 >183099 ctatgaacttgtcgaggtagtccatgaacacactgttcattaagtacatgaagtaggctg 183158 AC211265.5 >1681 ............................................................ 1740 AC204414.4 >183159 gcgcattcgtcaaaccgaatgacatgaccgtgaactcatatagtccatacttggtgatga 183218 AC211265.5 >1741 ............................................................ 1800 AC204414.4 >183219 atgttgtcttcagtatatctgaaggtcggattctaagctgatggtagcatgaccttagat 183278 AC211265.5 >1801 ............................................................ 1860 AC204414.4 >183279 ctatcttcgagaacacactggctcctctcaactgatcgaataaatcttaaattctgggca 183338 AC211265.5 >1861 ............................................................ 1920 AC204414.4 >183339 gggtacttgttcttgatagtaacctcattcaaggatctgtagtcaatacacatcctcttt 183398 AC211265.5 >1921 ............................................................ 1980 AC204414.4 >183399 gtgccatccttcttctccacaaacagcacttgggctgcccaaggcgaggtacttggtctg 183458 AC211265.5 >1981 ............................................................ 2040 AC204414.4 >183459 atataacctttctccaacaactcatcaatctgcttcttgagttccaccaactttggtcca 183518 AC211265.5 >2041 ............................................................ 2100 AC204414.4 >183519 gacactcgataggctcttttggaaataggggcggtgcctggtataagttatatggcaaat 183578 AC211265.5 >2101 ............................................................ 2160 AC204414.4 >183579 tcaaccttcctttcaggtggcataccaggtaactcctcgggaaacacatctgggaattct 183638 AC211265.5 >2161 ............................................................ 2220 AC204414.4 >183639 gacactacattgatagcctctgatgatttaatctcttcaatatgggcggtgacttggtaa 183698 AC211265.5 >2221 ............................................................ 2280 AC204414.4 >183699 taactccctttccttggtcctgacaagatcaactctactaacacttcttctcctgataag 183758 AC211265.5 >2281 ............................................................ 2340 AC204414.4 >183759 gacactaacttcaccgttctcttgtcacagttaagactggcttgatacttggttagccaa 183818 AC211265.5 >2341 ............................................................ 2400 AC204414.4 >183819 ttcatccctaggatgacatctatagttgcatcctggttacccataactattaaatcagca 183878 AC211265.5 >2401 ............................................................ 2460 AC204414.4 >183879 gtgaactctatcccccttatttgaacctttgcactagggcaaaatctatcagtttgggtc 183938 AC211265.5 >2461 ............................................................ 2520 AC204414.4 >183939 cttccaccaactgaactaactctcatgggtggatacatgggtgctactggtatactatgt 183998 AC211265.5 >2521 ............................................................ 2580 AC204414.4 >183999 gtttctacccatgacgcagtcacaaaagaatgcattgcttctagtatcaaataagacatt 184058 AC211265.5 >2581 ......................................-..................... 2639 AC204414.4 >184059 tgcagaatgggtactcgactgaaaaacgtacctaatgccactcctggagtctcctggact 184118 AC211265.5 >2640 ........-............-...................................... 2697 AC204414.4 >184119 gtgtcggcctccaagtgggtccacctttccatactgggcacgaggttgcccatggttgtt 184178 AC211265.5 >2698 ..................t.-....................................... 2756 AC204414.4 >184179 gccctcctggctgcattgcatcctgcctgactagggcattgggagctggctgctgctgag 184238 AC211265.5 >2757 .-.......................................................... 2815 AC204414.4 >184239 ctgctttctttgggcaatgattcgcccagtggccttgttccccacagtggaaacatgcac 184298 AC211265.5 >2816 ............................................................ 2875 AC204414.4 >184299 gacttcctccttgctctagcgctgcttggttgttctggttggttgctggggcaggaagat 184358 AC211265.5 >2876 ............................................................ 2935 AC204414.4 >184359 gggctgcctggttgatctgccgctggtattgatttcctccttgctggttgttctgacggt 184418 AC211265.5 >2936 ............................................................ 2995 AC204414.4 >184419 actgctgctgctgctgaggaaactgcctctggtactgctgctggttctgacggtgatgct 184478 AC211265.5 >2996 ............................................................ 3055 AC204414.4 >184479 ggtgctggtgaccttgcttgaatggctgaggtgggttgcctgagtagcgaggacggctgc 184538 AC211265.5 >3056 ............................................................ 3115 AC204414.4 >184539 tactctcaacctgaggtccaccaatcttacgtttcctgtcctccatctcccgacgcttcc 184598 AC211265.5 >3116 ............................................................ 3175 AC204414.4 >184599 tttctatcatgattgctctgtctatcaagtgctggaaggtagggaaggttggttcatcag 184658 AC211265.5 >3176 ............................................................ 3235 AC204414.4 >184659 ctgatagtggaggggatcaaccaatcctctcaagaagcggtactgcctcttggcatccgt 184718 AC211265.5 >3236 ............................................................ 3295 AC204414.4 >184719 gttgacatcttttggggcataacgtgacagctgcagaaacttgtccctgtactcgctgac 184778 AC211265.5 >3296 ............................................................ 3355 AC204414.4 >184779 ggataggggaccctacttcaaggcgataaactcctccttcctcactatcatcagtccctc 184838 AC211265.5 >3356 ............................................................ 3415 AC204414.4 >184839 gggcacatggtagcgacggaagttgtccctaaattcttcccaagagatggcttcagggtt 184898 AC211265.5 >3416 ............................................................ 3475 AC204414.4 >184899 ggcatgagtggcgaggtaagactcccaccaagactatgctgctcccctcagttgtcgggg 184958 AC211265.5 >3476 ............................................................ 3535 AC204414.4 >184959 accgtacaacaccttctcacgatcgttccactgagcagtgtgcaactcacactccatggt 185018 AC211265.5 >3536 ............................................................ 3595 AC204414.4 >185019 acacaaccaatcttcagcgtccatgggatcagcagaataggcaaaaacaaggggatgacc 185078 AC211265.5 >3596 ............................................................ 3655 AC204414.4 >185079 cctcatgaactctgcccgcttgtctctaggcatttgaggcatctgaacttgcacctgagg 185138 AC211265.5 >3656 ............................................................ 3715 AC204414.4 >185139 ctgaggcggtggtggctgctgctgcacttgctgcattgctgctaaggtctgtccgattgc 185198 AC211265.5 >3716 ............................................................ 3775 AC204414.4 >185199 ctgaactactcgagtctgcatcaagaacatttgctcaatgttcatcgggggtggcggtgg 185258 AC211265.5 >3776 ............................................................ 3835 AC204414.4 >185259 caaatgctgctgcggggctgcctcctcttggggtgcctgctatttattaggctgagcacg 185318 AC211265.5 >3836 ............................................................ 3895 AC204414.4 >185319 ccttgcacctctgcgcctgttctcagacatctgtagaaatcacacacatatatcaaatct 185378 AC211265.5 >3896 ............................................................ 3955 AC204414.4 >185379 gactctgcagtctttcaacataagaaaagatgtatagaaaatcttcatagcactgaacaa 185438 AC211265.5 >3956 ............................................................ 4015 AC204414.4 >185439 ttgaccatctccgctgacagcttctcagataaagaggaaagtggaaataaatggattgcc 185498 AC211265.5 >4016 ............................................................ 4075 AC204414.4 >185499 caactaaataactaactttattaataactacaccaagttgcaggggatacccacaccttg 185558 AC211265.5 >4076 ............................................................ 4135 AC204414.4 >185559 gtgacaatcattacaaagatccaacttcagtacatgtccatcataacaagcatccaacat 185618 AC211265.5 >4136 ............................................................ 4195 AC204414.4 >185619 aaaataagcaaactaactcaactaagactgacttgactaagacactgaactaagcattat 185678 AC211265.5 >4196 ............................................................ 4255 AC204414.4 >185679 tacagacttcgactctgtcgatctagggatccaaatctatccgggtcctgcagtctgggg 185738 AC211265.5 >4256 ............................................................ 4315 AC204414.4 >185739 taccacagtcgaagcgtccgcggggcggtgaacggtaagggtgcatgaatctcgacaaac 185798 AC211265.5 >4316 ................a..a........................-............--- 4371 AC204414.4 >185799 gaatcaagctgaatcataagaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 185858 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >185859 nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 185918 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >185919 nnncatctagagattcgtctgagctgttttgagttgagattctatcggttttcatttgtg 185978 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >185979 cactcttttgtgtgtgtggtcttgctgcatttgcgtgcttgtgtgtgttgctactccctc 186038 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >186039 ccttactcttgcccttgattgtgatcatactgtgataagagagacaaactccctcttgta 186098 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >186099 aaaatgacttgactaagacactgaactaagcattataacagacttcgactctgtcgatct 186158 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >186159 agggatccaaatctatccgggtcctgcagtctggggtaccacagtcgaagcgaccacggg 186218 AC211265.5 >-1 ------------------------------------------------------------ -1 AC204414.4 >186219 gcggtgaacggtaagggtgctgaatctcgacaggggcgggagaaccaccatccagatagt 186278 AC211265.5 >4372 --------------------------------............................ 4399 AC204414.4 >186279 ggcgtgctgcgctctcagcacgcaattccacaacctccgctcgaaccttgcccaactcat 186338 AC211265.5 >4400 ............................................................ 4459 AC204414.4 >186339 caagggcatggtccaactctgtgttgagcatggtacccaagttgaccatgctgttcagcc 186398 AC211265.5 >4460 ............................................................ 4519 AC204414.4 >186399 tgagattaccctcaccaactggcgaggcaatcacacctccagcactgccgattgaacgac 186458 AC211265.5 >4520 ............................................................ 4579 AC204414.4 >186459 gaggatagtacttcaggtcaaggccatcagctaccccgctgaacaacgagcaatactgag 186518 AC211265.5 >4580 ............................................................ 4639 AC204414.4 >186519 aaagtgcccatcgtgctgcatcttgcatggctgcctcggcagtatccctctcagtaatag 186578 AC211265.5 >4640 ............................................................ 4699 AC204414.4 >186579 aatagtgctctgagaaggcctctgcaccccggaaatcatcgtctagacggcgcaccaagc 186638 AC211265.5 >4700 ............................................................ 4759 AC204414.4 >186639 aagtagcctcccactggtccgggtatagtccgcgacgatgctggtagactacacaatagt 186698 AC211265.5 >4760 ............................................................ 4819 AC204414.4 >186699 actcaatagaccatgtgtgtcggtagaaggcctgacgcagcagggtgtcgagagcgtcgt 186758 AC211265.5 >4820 ............................................................ 4879 AC204414.4 >186759 ggaagtgacacccgtgagcagcgtcacgagtgatgggtctagcaatccatcccttcggct 186818 AC211265.5 >4880 ............................................................ 4939 AC204414.4 >186819 ccttcgagagctctgtgtcgtggctcgaactgccaccggcgtcgtcgtcgtctccgtctc 186878 AC211265.5 >4940 ............................................................ 4999 AC204414.4 >186879 cgttagggtctcctccagcagccgggatgccctgaggttgaagcgtccccaatcctctag 186938 AC211265.5 >5000 ............................................................ 5059 AC204414.4 >186939 gactcaaatgtgatacaattactagtcccaggaggctagcaaacacatttatacatcaga 186998 AC211265.5 >5060 ............................................................ 5119 AC204414.4 >186999 tgataccaaatctgcttaaacgagacaaacctataaaggtggcggtcaactttaagagtt 187058 AC211265.5 >5120 ............................................................ 5179 AC204414.4 >187059 ggtccataactcgagacatatcatcagagtggggctgaagcagcccgatatacgcagcga 187118 AC211265.5 >5180 ............................................................ 5239 AC204414.4 >187119 agcaagtcagcggtccaacagccacaggcaaggttgggaacagtcgtaacttttacccga 187178 AC211265.5 >5240 ...................................................c........ 5299 AC204414.4 >187179 tctcctttttctgaaaaacaacaaataagc-agggtgagtacaaacgtactcagcagccc 187237 AC211265.5 >5300 ..............................a............................. 5359 AC204414.4 >187238 accttcacccgcggaatggggaaatcagatataatgcatggaatatgtagagctcaagat 187297 AC211265.5 >5360 ............................................................ 5419 AC204414.4 >187298 atttgcagaaacagcaatattttatgcagggttgttttgaaaaacattttgtattttgca 187357 AC211265.5 >5420 ............................................................ 5479 AC204414.4 >187358 aagcgcatcctctccaaaaggagcaggaagtttttcagtattataacaaaatcccctgga 187417 AC211265.5 >5480 ............................................................ 5539 AC204414.4 >187418 ctaaaccatccaggtatctcagcagtttcccactggttttccttttcaaaaacagctact 187477 AC211265.5 >5540 ............................................................ 5599 AC204414.4 >187478 ggacttcccgtccaccatagctcacggctcaaccgccggtccttttaaaaaccacttttc 187537 AC211265.5 >5600 ............................................................ 5659 AC204414.4 >187538 tcaaacccatcttttttttggaaaacaaaacattaattgccataccataccagactcgtc 187597 AC211265.5 >5660 ............................................................ 5719 AC204414.4 >187598 cattcctgtggacacagactattcgaataggtttgaactctgcgcagaggtgtacacttt 187657 AC211265.5 >5720 ............................................................ 5779 AC204414.4 >187658 acccactagttcggctctgcgatcccatggccaatgagacccgaatccgactctctttct 187717 AC211265.5 >5780 ............................................................ 5839 AC204414.4 >187718 ttccccgcacgtcctaaccttaacggttatccggaaggggtcaggccaccaccatgtcca 187777 AC211265.5 >5840 ............................................................ 5899 AC204414.4 >187778 aaccggacaaaactttccccctccttatcctcccggtgctccccagccttcataaccctg 187837 AC211265.5 >5900 ............................................................ 5959 AC204414.4 >187838 gggttggaccgtacgagttcagattgagtgactgcccacacagtctcgagtggttgtact 187897 AC211265.5 >5960 ............................................................ 6019 AC204414.4 >187898 tatcatgagtacaggtagtgaaagatgacaaaccggtccttatatgaggggacaatcctt 187957 AC211265.5 >6020 ............................................................ 6079 AC204414.4 >187958 ctgctcacgcctaaaccagctgagccaacaccttaggccctcccctaaaccagggagtcc 188017 AC211265.5 >6080 ............................................................ 6139 AC204414.4 >188018 ctaattatcccactcacaaggtgataagggtgaaaacccttcatcatat-c-ttc-gata 188074 AC211265.5 >6140 .................................................a.a..tt..a. 6199 AC204414.4 >188075 agcattttc-tttgaaaactcacacctt-cctcaaatcat 188112 AC211265.5 >6200 .........t..................t........... 6239
Events
Id | Type | Date | Whodid | Comment |
296459 | InitNoAlign | 01/15/2014 17:43:47 | cgi_chen | find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Aug 1 2013. Toolkit wrapper using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib Info: Blast Including ID: 545270761 Info: Running Blast Filter: 0 Info: Determined ID: gi|545270761 needs Merging. Info: Blast Including ID: 545270761 Info: Running Blast Filter: 0 Info: Determined ID: gi|545270761 needs Merging. Info: Blast Including ID: 545270761 Info: Running Blast Filter: 0 Info: Determined ID: gi|545270761 needs Merging. Info: Best Rank: -1 in for 545270761 of 1 Info: NG returned 0 alignments tpf_solo for TPF_updated_1_v2 |
300123 | ReRunFndOvlp | 02/11/2014 17:01:38 | cgi_chen | find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Feb 4 2014. Toolkit wrapper using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib Info: Blast Including ID: 545270761 Info: Running Blast Filter: Info: CBlastAligner found 3 hits. Info: Determined ID: gi|545270761 needs Merging. Info: Merged into 0 alignments. Info: Blast Including ID: 545270761 Info: Running Blast Filter: Info: CBlastAligner found 47 hits. Info: Determined ID: gi|545270761 needs Merging. Info: Merged into 40 alignments. Info: Blast Including ID: 545270761 Info: Running Blast Filter: Info: CBlastAligner found 42 hits. Info: Determined ID: gi|545270761 needs Merging. Info: Merged into 48 alignments. Info: Best Rank: 7 in for 545270761 of 1 Info: NG returned 4 alignments Info: Edge-dup filtered down to 1 alignments |
382195 | CreateSwitchPt | 12/19/2014 16:01:22 | chenhc | tpf_m_BuilderId: t Toolkit wrapper version: built Nov 13 2014 using /home/boukn/code/toolkit/c++/GCC481-ReleaseMT64/lib |
BAC Ends
Clone | R | F | ||||
---|---|---|---|---|---|---|
Accession | %id | Position (strand) | Accession | %id | Position (strand) | |
CH201-115K4 | AC211265.5 | 100% | pos 157880 (F+) | |||
CH201-140I23 | AC204414.4 | 99.02% | pos 97367 (R+) | |||
CH201-150P5 | AC204414.4 | 100% | pos 90185 (F+) | |||
AC204414.4 | 100% | pos 89621 (F+) | ||||
CH201-155D8 | AC211265.5 | 99.26% | pos 94680 (F-) | |||
CH201-159I4 | AC204414.4 | 100% | pos 89629 (R+) | AC211265.5 | 100% | pos 94683 (F-) |
AC204414.4 | 100% | pos 90193 (R+) | ||||
CH201-174D7 | AC211265.5 | 100% | pos 10636 (R+) | |||
CH201-17L23 | AC211265.5 | 100% | pos 58379 (R-) | |||
AC211265.5 | 100% | pos 69566 (R-) | ||||
CH201-190F6 | AC211265.5 | 98.45% | pos 120855 (R-) | |||
CH201-193N21 | AC204414.4 | 100% | pos 86083 (R+) | AC211265.5 | 99.86% | pos 94168 (F-) |
CH201-19H24 | AC204414.4 | 97.45% | pos 88961 (R+) | |||
CH201-210I13 | AC211265.5 | 99.57% | pos 76352 (R-) | |||
CH201-214K4 | AC211265.5 | 97.96% | pos 58807 (F+) | |||
AC211265.5 | 97.96% | pos 69994 (F+) | ||||
CH201-229F8 | AC204414.4 | 99.07% | pos 97361 (R+) | |||
CH201-22E2 | AC204414.4 | 99.72% | pos 25582 (R+) | |||
CH201-239E10 | AC204414.4 | 97.83% | pos 89056 (F-) | |||
CH201-23L19 | AC211265.5 | 100% | pos 10802 (F+) | |||
CH201-246H13 | AC211265.5 | 100% | pos 76352 (R-) | |||
CH201-248G9 | AC211265.5 | 99.68% | pos 136948 (F+) | |||
CH201-254C9 | AC204414.4 | 99.32% | pos 47694 (R+) | |||
CH201-264B23 | AC204414.4 | 100% | pos 35081 (R+) | |||
CH201-285A22 | AC204414.4 | 99.11% | pos 47330 (R-) | |||
CH201-286I22 | AC204414.4 | 100% | pos 35031 (R+) | |||
CH201-315A13 | AC211265.5 | 100% | pos 69283 (R+) | |||
AC211265.5 | 100% | pos 58096 (R+) | ||||
CH201-341P20 | AC211265.5 | 100% | pos 42443 (R+) | |||
CH201-360E3 | AC204414.4 | 99.64% | pos 49938 (F-) | |||
CH201-368O10 | AC211265.5 | 99.6% | pos 96777 (R+) | |||
CH201-36E9 | AC211265.5 | 100% | pos 136803 (F+) | |||
AC211265.5 | 99.62% | pos 136811 (F+) | ||||
CH201-36F14 | AC211265.5 | 99.85% | pos 15355 (R-) | AC204414.4 | 100% | pos 35080 (F+) |
CH201-419N12 | AC204414.4 | 100% | pos 98200 (F+) | |||
CH201-423C2 | AC211265.5 | 100% | pos 70702 (R-) | AC204414.4 | 99.85% | pos 65671 (F+) |
CH201-430J18 | AC211265.5 | 100% | pos 36880 (R-) | |||
CH201-450P6 | AC211265.5 | 100% | pos 113576 (R+) | |||
CH201-455F21 | AC211265.5 | 100% | pos 133375 (R+) | |||
AC211265.5 | 100% | pos 133602 (R+) | ||||
CH201-481B24 | AC204414.4 | 100% | pos 170831 (F-) | |||
CH201-482L6 | AC204414.4 | 100% | pos 47482 (R+) | AC211265.5 | 100% | pos 16860 (F-) |
CH201-524P10 | AC204414.4 | 100% | pos 142817 (F+) | |||
CH201-536A23 | AC211265.5 | 100% | pos 59095 (R+) | |||
AC211265.5 | 100% | pos 70282 (R+) | ||||
AC211265.5 | 100% | pos 53027 (R+) | ||||
CH201-554D21 | AC211265.5 | 99.15% | pos 92459 (R-) | |||
CH201-554N3 | AC211265.5 | 100% | pos 92863 (R-) | |||
CH201-555I18 | AC204414.4 | 99.07% | pos 52582 (R-) | |||
AC204414.4 | 100% | pos 52667 (R-) | ||||
CH201-567F3 | AC211265.5 | 100% | pos 88868 (R-) | |||
CH201-5A24 | AC204414.4 | 99.29% | pos 89046 (F-) | |||
CH201-96F3 | AC211265.5 | 100% | pos 15251 (F-) | |||
ZMMBBb-127D15 | AC204414.4 | 98.11% | pos 21872 (R-) | |||
ZMMBBb-135N5 | AC204414.4 | 99.36% | pos 102366 (R+) | |||
ZMMBBb-140E24 | AC211265.5 | 97.4% | pos 117617 (R-) | |||
ZMMBBb-146G8 | AC204414.4 | 98.5% | pos 14350 (F+) | |||
ZMMBBb-158C10 | AC211265.5 | 98.5% | pos 134781 (R+) | |||
ZMMBBb-170N18 | AC211265.5 | 99.37% | pos 44262 (R+) | AC211265.5 | 98.04% | pos 162016 (F-) |
ZMMBBb-175L15 | AC211265.5 | 99.37% | pos 122640 (F+) | |||
ZMMBBb-175N19 | AC204414.4 | 99.85% | pos 169351 (R-) | |||
ZMMBBb-196B16 | AC204414.4 | 97.88% | pos 46104 (F-) | |||
ZMMBBb-196C19 | AC211265.5 | 99.27% | pos 39405 (F+) | |||
ZMMBBb-197B12 | AC211265.5 | 98.25% | pos 52470 (R+) | |||
ZMMBBb-230M15 | AC211265.5 | 99.2% | pos 121096 (F+) | |||
ZMMBBb-260J19 | AC211265.5 | 98.81% | pos 162090 (F-) | |||
ZMMBBb-276H21 | AC204414.4 | 98.76% | pos 29946 (R+) | |||
ZMMBBb-287B13 | AC204414.4 | 99.56% | pos 88483 (F+) | |||
ZMMBBb-334M15 | AC211265.5 | 98.69% | pos 14769 (R+) | AC211265.5 | 98.85% | pos 158858 (F-) |
ZMMBBb-358B12 | AC204414.4 | 99.36% | pos 28281 (R+) | |||
ZMMBBb-374I15 | AC211265.5 | 98.49% | pos 134743 (F+) | |||
ZMMBBb-382N20 | AC204414.4 | 99.4% | pos 130446 (F-) | |||
ZMMBBb-395N23 | AC204414.4 | 99.48% | pos 89053 (R+) | |||
ZMMBBb-422I9 | AC211265.5 | 100% | pos 74256 (R+) | |||
ZMMBBb-449L16 | AC211265.5 | 98.22% | pos 136759 (F+) | |||
ZMMBBb-471G8 | AC204414.4 | 97.24% | pos 152101 (F-) | |||
ZMMBBb-514M24 | AC204414.4 | 98.31% | pos 102380 (R+) | |||
ZMMBBb-530P16 | AC211265.5 | 97.14% | pos 115092 (F+) | |||
ZMMBBb-571I9 | AC211265.5 | 98.66% | pos 77643 (F+) | |||
ZMMBBb-579A17 | AC204414.4 | 98.89% | pos 131243 (R-) | |||
ZMMBBb-595F16 | AC211265.5 | 98.16% | pos 39225 (R-) | |||
ZMMBBb-636K18 | AC211265.5 | 97.68% | pos 40156 (F+) |
Fosmid Ends
Clone | R | F | ||||
---|---|---|---|---|---|---|
Accession | %id | Position (strand) | Accession | %id | Position (strand) | |
Z_AI-1072G2 | AC211265.5 | 100% | pos 93306 (F-) | |||
Z_AI-1080E1 | AC204414.4 | 99.7% | pos 176189 (F+) | |||
Z_AI-1133B1 | AC204414.4 | 100% | pos 138572 (F+) | |||
Z_AI-1210L8 | AC211265.5 | 100% | pos 155962 (F+) | |||
Z_AI-1234A9 | AC204414.4 | 100% | pos 126591 (R-) | |||
Z_AI-1237I12 | AC204414.4 | 100% | pos 169397 (R+) | |||
Z_AI-1238L12 | AC211265.5 | 100% | pos 114295 (R+) | |||
Z_AI-1242H6 | AC204414.4 | 100% | pos 134797 (R-) | |||
Z_AI-1270O22 | AC211265.5 | 100% | pos 154891 (R+) | |||
Z_AI-1323D16 | AC204414.4 | 100% | pos 88773 (F+) | |||
Z_AI-1342J22 | AC204414.4 | 100% | pos 95622 (R-) | |||
Z_AI-1367J15 | AC211265.5 | 100% | pos 4824 (F-) | |||
AC204414.4 | 100% | pos 186703 (F-) | ||||
Z_AI-1405O10 | AC211265.5 | 99.57% | pos 192093 (R+) | |||
Z_AI-1420G15 | AC204414.4 | 99.45% | pos 67998 (R+) | AC204414.4 | 99.81% | pos 101698 (F-) |
Z_AI-1462P1 | AC204414.4 | 100% | pos 135736 (R-) | |||
Z_AI-17A17 | AC204414.4 | 99.86% | pos 45965 (F+) | |||
Z_AI-260H23 | AC211265.5 | 99.61% | pos 13445 (F+) | |||
Z_AI-289H13 | AC204414.4 | 100% | pos 176071 (R-) | AC204414.4 | 99.87% | pos 141831 (F+) |
Z_AI-290M12 | AC204414.4 | 100% | pos 45897 (R+) | |||
Z_AI-296B10 | AC204414.4 | 99.51% | pos 54165 (R+) | |||
Z_AI-302J13 | AC211265.5 | 100% | pos 38277 (R+) | AC211265.5 | 100% | pos 76839 (F-) |
AC211265.5 | 98.48% | pos 38318 (F+) | ||||
Z_AI-313I2 | AC211265.5 | 99.76% | pos 16407 (R+) | AC211265.5 | 98.76% | pos 70503 (F-) |
AC211265.5 | 98.76% | pos 59316 (F-) | ||||
AC211265.5 | 98.76% | pos 53248 (F-) | ||||
AC211265.5 | 100% | pos 52936 (F-) | ||||
AC211265.5 | 100% | pos 59004 (F-) | ||||
AC211265.5 | 100% | pos 70191 (F-) | ||||
Z_AI-400L21 | AC211265.5 | 100% | pos 4624 (R-) | |||
AC204414.4 | 100% | pos 186503 (R-) | ||||
Z_AI-441G1 | AC204414.4 | 99.65% | pos 168552 (F+) | |||
Z_AI-445B15 | AC204414.4 | 99.85% | pos 142312 (F-) | |||
Z_AI-479H21 | AC204414.4 | 99.86% | pos 120510 (F-) | |||
Z_AI-531L15 | AC211265.5 | 100% | pos 54118 (F+) | |||
Z_AI-547M23 | AC204414.4 | 100% | pos 88906 (R+) | |||
Z_AI-55N12 | AC211265.5 | 100% | pos 174882 (F+) | |||
Z_AI-595H22 | AC211265.5 | 99.86% | pos 112750 (R-) | AC211265.5 | 99.73% | pos 75364 (F+) |
Z_AI-59L5 | AC204414.4 | 99.85% | pos 72882 (R+) | |||
Z_AI-607K2 | AC211265.5 | 99.7% | pos 179324 (R+) | |||
Z_AI-628A17 | AC211265.5 | 100% | pos 91597 (R+) | AC211265.5 | 100% | pos 130628 (F-) |
Z_AI-667C13 | AC204414.4 | 99.42% | pos 156881 (R-) | AC204414.4 | 100% | pos 130573 (F+) |
Z_AI-667K15 | AC204414.4 | 100% | pos 49093 (F+) | |||
Z_AI-668C4 | AC204414.4 | 100% | pos 88277 (R-) | |||
Z_AI-688N1 | AC211265.5 | 100% | pos 34038 (F-) | |||
Z_AI-719C5 | AC211265.5 | 100% | pos 191632 (F+) | |||
Z_AI-720H23 | AC204414.4 | 100% | pos 178728 (R-) | AC204414.4 | 99.84% | pos 139217 (F+) |
Z_AI-792B14 | AC211265.5 | 100% | pos 135311 (R-) | AC211265.5 | 100% | pos 96106 (F+) |
Z_AI-837E19 | AC204414.4 | 100% | pos 44950 (F-) | |||
Z_AI-860G17 | AC211265.5 | 100% | pos 127831 (R-) | AC211265.5 | 100% | pos 95960 (F+) |
Z_AI-871O5 | AC204414.4 | 100% | pos 121647 (F-) | |||
Z_AI-880H8 | AC204414.4 | 100% | pos 58057 (F-) | |||
AC204414.4 | 100% | pos 58177 (F-) | ||||
Z_AI-887I18 | AC204414.4 | 98.98% | pos 136633 (R-) | AC204414.4 | 99.28% | pos 111298 (F-) |
Z_AI-963I11 | AC211265.5 | 99.78% | pos 74504 (R-) | AC211265.5 | 100% | pos 32936 (F+) |
Z_AI-971B16 | AC204414.4 | 100% | pos 77806 (R+) |