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- Study Description
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Important Links and Information
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Request access via Authorized Access
- Instructions for requestors
- Data Use Certification (DUC) Agreement
- Talking Glossary of Genetic Terms
This is a study of the biological risk factors for children enrolled in the INSIGHT (Intervention Nurses Start Infants Growing on Healthy Trajectories) study. INSIGHT is a randomized, controlled trial testing a responsive parenting intervention designed for the primary prevention of childhood obesity against a safety control. These first-born children were deeply studied in this time period with data collected on a wide variety of variables including mode of delivery, gender, weight and height (collected at 7 time points), medication usage, diet information, and maternal health information (gestational weight gain, gestational diabetes, smoking during pregnancy).
This study includes a survey of the oral and gut microbiota from 226 mother-child dyads. It was designed to investigate the relationship between a cross-sectional view of the child's microbiome (at two years of age) and the patterns of growth between birth and 2 years. Microbiome samples from children (buccal swab and stool sample) and their mothers (buccal swab) are collected at the children's 2-year clinical research visit. Stool metabolites have also been assayed for a subset of the 226 children using 1H-NMR.
Additionally, we genotyped the same individuals for SNPs across the genome.
- Study Weblinks:
- Study Design:
- Prospective Longitudinal Cohort
- Study Type:
- Cohort
- dbGaP estimated ancestry using GRAF-pop
- Total number of consented subjects: 457
- Subject Sample Telemetry Report (SSTR)
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- Authorized Access
- Publicly Available Data (Public ftp)
- Study Inclusion/Exclusion Criteria
Inclusion/exclusion criteria for participants in this study are explained in detail in Paul et al. BMC Pediatrics. 2014 (PMID:25037579).
Briefly, individuals were first-born children delivered at Penn State Milton S. Hershey Medical Center in Hershey, Pennsylvania. These individuals were full-term (>37 weeks gestation) singletons. Mothers were English-speaking, primiparous, >20 years of age, and residing within 50 miles of the medical center. Exclusion criteria include a plan for the infant to be adopted or moved from Central Pennsylvania within 3 years, a prenatal ultrasound demonstrating intrauterine growth retardation, a newborn weight of <2500 grams, or if the mother or infant had significant health issues affecting study participation.
- Molecular Data
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Type Source Platform Number of Oligos/SNPs SNP Batch Id Comment 16S rRNA Sequencing Illumina MiSeq N/A N/A Whole Genome Genotyping Affymetrix Precision Medicine Array N/A N/A - Study History
Microbiome molecular data for this study is available on the Sequence Read Archive (SRA) under BioProject number PRJNA420339.
- Selected Publications
- Diseases/Traits Related to Study (MeSH terms)
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- Primary Phenotype: Pediatric Obesity
- Links to Related Resources
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- BioProject
- PubMed
- PMC
- Clinical Trials
- Authorized Data Access Requests
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See research articles citing use of the data from this study
- Study Attribution
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Principal Investigator
- Kateryna D. Makova, PhD. Penn State University, University Park, PA, USA.
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Funding Sources
- R01DK088244. National Institutes of Health, Bethesda, MD, USA.
- R01DK99364. National Institutes of Health, Bethesda, MD, USA.
- UL1TR000127. National Institutes of Health, Bethesda, MD, USA.
- Tobacco Settlement and CURE funds. Pennsylvania Department of Health, Harrisburg, PA, USA.
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Principal Investigator