Jump to: | Authorized Access | | | Attribution | | | Authorized Requests |
- Study Description
-
Important Links and Information
-
Request access via Authorized Access
- Instructions for requestors
- Data Use Certification (DUC) Agreement
- Talking Glossary of Genetic Terms
This study consists of three components.
The first component includes genome-wide association study (GWAS) data on 695 TS cases and 198 ancestry matched controls from the first TS GWAS of 1285 TS cases and 4964 ancestry matched controls.
The second component includes genome-wide association study (GWAS) data on 2106 TS cases from the second TS GWAS of 2716 TS cases and 3762 ancestry matched controls.
The third component consists of 438 individuals representing 146 probands with DSM-IV-TR diagnosed Tourette Syndrome and their parents (146 complete parent-offspring trios). These individuals are part of the whole exome sequencing study, aiming to use whole exome sequencing of TS parent-offspring to identify de novo protein-truncating variants (PTVs) that are present in the child with TS but not in either parent.
All subjects were collected by the Tourette Association of America International Consortium for Genetics (TAAICG) at seven sites in the United States and Canada.
Both affected individuals and unaffected relatives were assessed for the presence of Tourette Syndrome and Chronic (Persistent) Tic Disorder (CTD) using a standardized, semi-structured interview, which has high clinical validity and reliability for the diagnoses of TS and CTD (TSAICG, Am J Hum Genet, 2007 (PMID: 17304708)); Darrow et al., Psychiatric Research, 2015 (PMID: 26054936)).
- Study Design:
- Family/Twin/Trios
- Study Type:
- Case-Control
- Parent-Offspring Trios
- dbGaP estimated ancestry using GRAF-pop
- Total number of consented subjects: 3296
- Subject Sample Telemetry Report (SSTR)
-
Request access via Authorized Access
- Authorized Access
- Publicly Available Data
- Link to other NCBI resources related to this study
- Study Inclusion/Exclusion Criteria
The cases were required a TS Classification Study Group (TSCSG) diagnosis of definite TS (a DSM-IV-TR diagnosis of TS plus tics observed by an experienced clinician), and available genomic DNA extracted either from blood or cell lines. The exclusion criteria consisted of a history of intellectual disability (ID), tardive tourettism, or other known genetic, metabolic or acquired tic disorders.
The 198 French Canadian controls were collected in parallel with the French Canadian cases. They were unselected, ancestry matched controls.
Parent-offspring trios were required to have a child proband with a DSM-IV-TR diagnosis of Tourette Syndrome (TS). Trios were preferentially selected for parents without diagnoses of TS or Chronic Tic Disorder (CTD), though trios were not excluded if either (or both) parents had TS or CT. Trios were excluded if a child was known to have intellectual disability, an autism spectrum disorder, psychosis or seizures, though these diagnoses were not formally assessed in all families.
- Molecular Data
-
Type Source Platform Number of Oligos/SNPs SNP Batch Id Comment Whole Genome Genotyping Illumina Human610_Quadv1_B 601273 1048904 695 TS cases and 198 controls from the 1st TS GWAS Whole Genome Genotyping Illumina Infinium OmniExpressExome-8v1-1_A N/A N/A 2106 TS cases from the 2nd TS GWAS Whole Exome Sequencing Illumina HiSeq 2500 sequencers (Indexed, paired-end run) N/A N/A 18 parent-offspring trios using SeqCap EZ Exome v3 Exome capture library from Roche NimbleGen at UCLA Neurogenomics Core; 128 parent-offspring trios using SureSelect v1.1 Exome capture library from Agilent at Broad Institute - Study History
1994-2014: Samples collected
2009-2010: High-density SNP genotyping on initial case-control GWAS sample
2012-2014: High-density SNP genotyping on follow-up case-control GWAS sample
2014: Whole-exome sequencing performed on 186 parent-offspring trios- Selected Publications
- Diseases/Traits Related to Study (MeSH terms)
-
- Primary Phenotype: Tourette Syndrome
- Tics
- Neurodevelopmental Disorders
- Links to Related Genes
- Authorized Data Access Requests
-
See articles in PMC citing this study accession
- Study Attribution
-
-
Principal Investigators
- Jeremiah M. Scharf, MD, PhD. Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Departments of Neurology and Psychiatry, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
- Carol A. Mathews, MD. Center for OCD, Anxiety and Related Disorders, Genetic Institute, Department of Psychiatry, University of Florida, Gainesville, FL, USA.
- Giovanni Coppola, MD. Semel Institute for Neuroscience and Human Behavior, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, USA.
-
Institute
- National Institute of Neurological Disorders and Stroke (NINDS), National Institutes of Health, Bethesda, MD, USA.
-
Funding Sources
- U01 NS40024-09S1. National Institutes of Health, Bethesda, MD, USA.
- K02 NS85048. National Institutes of Health, Bethesda, MD, USA.
- P30 NS062691. National Institutes of Health, Bethesda, MD, USA.
- U01 NS40024. National Institutes of Health, Bethesda, MD, USA.
- R01 NS016648. National Institutes of Health, Bethesda, MD, USA.
- Tourette Association of America, Bayside, NY, USA.
-
Principal Investigators