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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:PLA2G5-PDR90-012104
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:173


all, sort by
SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss16357969 PLA2G5-000100 A/C 168 rs11573185 0 1 20068908 NT_032977.10 19482920
ss16357970 PLA2G5-000196 A/G 166 rs10916703 0 1 20069004 NT_032977.10 19483016
ss16357971 PLA2G5-000286 A/G 166 rs2148911 0 1 20069094 NT_032977.10 19483106
ss16357972 PLA2G5-000464 -/A 170 rs5772881 0 1 20069267 NT_032977.10 19483279
ss16357973 PLA2G5-000567 A/G 172 rs528614 1 1 20069375 NT_032977.10 19483387
ss16357974 PLA2G5-000591 A/G 168 rs2148912 0 1 20069399 NT_032977.10 19483411
ss16357975 PLA2G5-000662 C/T 164 rs11573188 0 1 20069470 NT_032977.10 19483482
ss16357976 PLA2G5-000825 C/T 164 rs11573189 0 1 20069633 NT_032977.10 19483645
ss16357977 PLA2G5-000998 A/G 176 rs11573190 0 1 20069806 NT_032977.10 19483818
ss16357978 PLA2G5-001114 A/G 178 rs11573191 0 1 20069922 NT_032977.10 19483934
ss16357979 PLA2G5-001257 A/G 178 rs11573192 0 1 20070065 NT_032977.10 19484077
ss16357980 PLA2G5-001347 A/G 178 rs3806311 0 1 20070155 NT_032977.10 19484167
ss16357981 PLA2G5-001373 A/C 178 rs668630 0 1 20070181 NT_032977.10 19484193
ss16357982 PLA2G5-001432 G/T 178 rs3806313 0 1 20070240 NT_032977.10 19484252
ss16357983 PLA2G5-001521 C/T 176 rs2020885 0 1 20070329 NT_032977.10 19484341
ss16357984 PLA2G5-001650 C/G 172 rs11573193 0 1 20070458 NT_032977.10 19484470
ss16357985 PLA2G5-001704 A/G 172 rs11573194 0 1 20070512 NT_032977.10 19484524
ss16357986 PLA2G5-001749 A/C 166 rs667147 1 1 20070557 NT_032977.10 19484569
ss16357987 PLA2G5-001856 C/T 158 rs576352 1 1 20070664 NT_032977.10 19484676
ss16357988 PLA2G5-001900 A/G 162 rs11573195 0 1 20070708 NT_032977.10 19484720
ss16357989 PLA2G5-001939 A/G 162 rs656110 1 1 20070747 NT_032977.10 19484759
ss16357990 PLA2G5-001994 A/G 162 rs11573196 0 1 20070802 NT_032977.10 19484814
ss16357991 PLA2G5-002108 C/G 162 rs1541214 1 1 20070916 NT_032977.10 19484928
ss16357992 PLA2G5-002109 C/G 162 rs11573197 0 1 20070917 NT_032977.10 19484929
ss16357993 PLA2G5-002182 A/T 162 rs7548263 0 1 20070990 NT_032977.10 19485002
ss16357994 PLA2G5-002209 A/T 162 rs11573198 0 1 20071017 NT_032977.10 19485029
ss16357995 PLA2G5-002219 C/T 162 rs11573199 0 1 20071027 NT_032977.10 19485039
ss16357996 PLA2G5-002414 C/G 158 rs653910 1 1 20071222 NT_032977.10 19485234
ss16357997 PLA2G5-002500 C/T 174 rs515156 1 1 20071308 NT_032977.10 19485320
ss16357998 PLA2G5-002676 C/T 176 rs11573200 0 1 20071484 NT_032977.10 19485496
30 of 173 subsnp's starting at ss16357969. ss# starting at ss

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