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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:GSTZ1-PDR90-060903
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:80


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss8829976 GSTZ1-000126 A/C 166 rs8177530 0 14 77319222 NT_026437.13 59095699
ss8829977 GSTZ1-000144 C/T 172 rs8177531 0 14 77319240 NT_026437.13 59095717
ss8829978 GSTZ1-000182 C/T 164 rs2363642 0 14 77319278 NT_026437.13 59095755
ss8829979 GSTZ1-000207 C/T 174 rs8177532 0 14 77319303 NT_026437.13 59095780
ss8829980 GSTZ1-000486 A/C 176 rs8177533 0 14 77319582 NT_026437.13 59096059
ss8829981 GSTZ1-000582 A/G 174 rs2193594 0 14 77319678 NT_026437.13 59096155
ss8829982 GSTZ1-000922 C/G 150 rs7160188 0 14 77320018 NT_026437.13 59096495
ss8829983 GSTZ1-000936 A/G 134 rs7160195 0 14 77320032 NT_026437.13 59096509
ss8829984 GSTZ1-001013 A/C 130 rs8177534 0 14 77320109 NT_026437.13 59096586
ss8829985 GSTZ1-001187 C/T 140 rs8177535 0 14 77320283 NT_026437.13 59096760
ss8829986 GSTZ1-001424 A/C 130 rs2270420 0 14 77320520 NT_026437.13 59096997
ss8829987 GSTZ1-001425 G/T 132 rs8177536 0 14 77320521 NT_026437.13 59096998
ss8829988 GSTZ1-002062 C/T 146 rs2234954 0 14 77321158 NT_026437.13 59097635
ss8829989 GSTZ1-002114 A/G 146 rs2234736 0 14 77321210 NT_026437.13 59097687
ss8829990 GSTZ1-002256 G/T 152 rs8177537 0 14 77321352 NT_026437.13 59097829
ss8829991 GSTZ1-002267 C/G 154 rs8177538 0 14 77321363 NT_026437.13 59097840
ss8829992 GSTZ1-002320 A/G 146 rs8177539 0 14 77321416 NT_026437.13 59097893
ss8829993 GSTZ1-002340 C/G 146 rs8177540 0 14 77321436 NT_026437.13 59097913
ss8829994 GSTZ1-002396 A/G 132 rs8177541 0 14 77321492 NT_026437.13 59097969
ss8829995 GSTZ1-003158 A/G 118 rs2111699 0 14 77322254 NT_026437.13 59098731
ss8829996 GSTZ1-003310 C/G 148 rs8177542 0 14 77322406 NT_026437.13 59098883
ss8829997 GSTZ1-003312 C/G 148 rs8177543 0 14 77322408 NT_026437.13 59098885
ss8829998 GSTZ1-003349 C/T 148 rs8177544 0 14 77322445 NT_026437.13 59098922
ss8829999 GSTZ1-003354 -/GTA 148 rs8177545 0 14 77322450 NT_026437.13 59098927
ss8830000 GSTZ1-003399 A/G 148 rs3759733 1 14 77322495 NT_026437.13 59098972
ss8830001 GSTZ1-003469 A/G 146 rs2363643 0 14 77322565 NT_026437.13 59099042
ss8830002 GSTZ1-003875 C/T 166 rs1861887 0 14 77322971 NT_026437.13 59099448
ss8830003 GSTZ1-003892 -/AT 174 rs5809822 0 14 77322988 NT_026437.13 59099465
ss8830004 GSTZ1-004137 G/T 178 rs8177546 0 14 77323233 NT_026437.13 59099710
ss8830005 GSTZ1-004194 -/A 176 rs8177547 0 14 77323290 NT_026437.13 59099767
30 of 80 subsnp's starting at ss8829976. ss# starting at ss

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