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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:JUN-PDR90-011403
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:36


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss6312654 JUN-005335 A/G 180 rs4647020 0 1 58780627 NT_032977.10 58194639
ss6312653 JUN-005221 C/T 172 rs4647019 0 1 58780741 NT_032977.10 58194753
ss6312652 JUN-005053 A/G 158 rs4647018 0 1 58780909 NT_032977.10 58194921
ss6312651 JUN-005008 A/C 156 rs1923942 1 1 58780954 NT_032977.10 58194966
ss6312650 JUN-004818 G/T 150 rs4647017 0 1 58781144 NT_032977.10 58195156
ss6312649 JUN-004416 A/T 154 rs4647016 0 1 58781546 NT_032977.10 58195558
ss6312648 JUN-004115 G/T 146 rs4647015 0 1 58781847 NT_032977.10 58195859
ss6312647 JUN-003641 A/G 140 rs11688 0 1 58782321 NT_032977.10 58196333
ss6312646 JUN-003413 C/T 138 rs4647014 0 1 58782549 NT_032977.10 58196561
ss6312645 JUN-002860 A/G 162 rs4647013 0 1 58783102 NT_032977.10 58197114
ss6312644 JUN-002828 A/G 162 rs4647012 0 1 58783134 NT_032977.10 58197146
ss6312643 JUN-002821 C/G 162 rs2760499 1 1 58783141 NT_032977.10 58197153
ss6312642 JUN-002718 G/T 156 rs4647011 0 1 58783244 NT_032977.10 58197256
ss6312641 JUN-002603 A/C 156 rs2811894 1 1 58783359 NT_032977.10 58197371
ss6312640 JUN-002366 C/G 146 rs4647010 0 1 58783596 NT_032977.10 58197608
ss6312639 JUN-002287 C/G 144 rs1407816 1 1 58783675 NT_032977.10 58197687
ss6312638 JUN-002273 -/CA 148 rs4647009 0 1 58783687 NT_032977.10 58197699
ss6312637 JUN-002187 G/T 148 rs4647008 0 1 58783773 NT_032977.10 58197785
ss6312636 JUN-002132 -/CCCC 162 rs3833546 1 1 58783825 NT_032977.10 58197837
ss6312635 JUN-001945 A/C 170 rs4647006 0 1 58784015 NT_032977.10 58198027
ss6312634 JUN-001696 A/G 166 rs4647005 0 1 58784264 NT_032977.10 58198276
ss6312633 JUN-001672 A/G 164 rs4647004 0 1 58784288 NT_032977.10 58198300
ss6312632 JUN-001616 A/G 166 rs4647003 0 1 58784344 NT_032977.10 58198356
ss6312631 JUN-001539 C/G 172 rs4647002 0 1 58784421 NT_032977.10 58198433
ss6312630 JUN-001214 C/G 164 rs4647001 0 1 58784746 NT_032977.10 58198758
ss6312629 JUN-001193 C/G 168 rs4647000 0 1 58784767 NT_032977.10 58198779
ss6312628 JUN-001180 C/T 170 rs4646999 0 1 58784780 NT_032977.10 58198792
ss6312627 JUN-000922 C/T 160 rs4646998 0 1 58785038 NT_032977.10 58199050
ss6312626 JUN-000535 A/C 172 rs2760501 1 1 58785425 NT_032977.10 58199437
ss6312625 JUN-000293 C/T 174 rs4646997 0 1 58785667 NT_032977.10 58199679
30 of 36 subsnp's starting at ss6312654. ss# starting at ss

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