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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:MCM5-PDR90-011303
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:151


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss6310418 MCM5-000031 C/G 148 rs4645726 0 22 35399297 NT_011520.13 16689733
ss6310419 MCM5-000058 C/T 166 rs4645727 0 22 35399324 NT_011520.13 16689760
ss6310420 MCM5-000154 A/G 168 rs1078979 0 22 35399420 NT_011520.13 16689856
ss6310421 MCM5-000598 C/G 162 rs4645728 0 22 35399864 NT_011520.13 16690300
ss6310422 MCM5-000780 A/G 170 rs4645729 0 22 35400046 NT_011520.13 16690482
ss6310423 MCM5-000914 C/T 174 rs4645730 0 22 35400180 NT_011520.13 16690616
ss6310424 MCM5-000998 G/T 164 rs4645731 0 22 35400264 NT_011520.13 16690700
ss6310425 MCM5-001346 C/T 158 rs2307335 0 22 35400612 NT_011520.13 16691048
ss6310426 MCM5-001393 C/G 144 rs743813 0 22 35400659 NT_011520.13 16691095
ss6310427 MCM5-001420 A/T 154 rs2307337 0 22 35400686 NT_011520.13 16691122
ss6310428 MCM5-001520 C/T 144 rs743814 0 22 35400786 NT_011520.13 16691222
ss6310429 MCM5-001528 -/TTTAT 160 rs4645732 0 22 35400794 NT_011520.13 16691230
ss6310430 MCM5-001599 A/G 174 rs4645733 0 22 35400865 NT_011520.13 16691301
ss6310431 MCM5-001679 A/G 174 rs4645734 0 22 35400945 NT_011520.13 16691381
ss6310432 MCM5-001735 A/G 174 rs4645735 0 22 35401001 NT_011520.13 16691437
ss6310433 MCM5-001833 C/T 174 rs4645736 0 22 35401099 NT_011520.13 16691535
ss6310434 MCM5-002074 C/T 162 rs743815 1 22 35401340 NT_011520.13 16691776
ss6310435 MCM5-002107 C/T 162 rs4645737 0 22 35401373 NT_011520.13 16691809
ss6310436 MCM5-002251 A/G 162 rs4645738 0 22 35401517 NT_011520.13 16691953
ss6310437 MCM5-002438 A/C 172 rs4645739 0 22 35401704 NT_011520.13 16692140
ss6310438 MCM5-002452 -/ACGTG 152 rs4645740 0 22 35401718 NT_011520.13 16692154
ss6310439 MCM5-002510 A/G 168 rs4645741 0 22 35401776 NT_011520.13 16692212
ss6310440 MCM5-002574 G/T 166 rs4645742 0 22 35401840 NT_011520.13 16692276
ss6310441 MCM5-002787 G/T 168 rs737777 0 22 35402053 NT_011520.13 16692489
ss6310442 MCM5-002788 C/T 168 rs4645743 0 22 35402054 NT_011520.13 16692490
ss6310443 MCM5-003327 A/G 164 rs4645744 0 22 35402593 NT_011520.13 16693029
ss6310444 MCM5-003464 G/T 168 rs4645745 0 22 35402730 NT_011520.13 16693166
ss6310445 MCM5-003630 C/T 174 rs4645746 0 22 35402896 NT_011520.13 16693332
ss6310446 MCM5-003676 A/G 176 rs4645747 0 22 35402942 NT_011520.13 16693378
ss6310447 MCM5-004086 A/C 172 rs713688 0 22 35403352 NT_011520.13 16693788
30 of 151 subsnp's starting at ss6310418. ss# starting at ss

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