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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:GTF2H1-PDR90-101602
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:165


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss5605474 GTF2H1-000121 A/G 154 rs4150526 0 11 18321662 NT_009237.19 18261662
ss5605475 GTF2H1-000446 C/G 170 rs4150527 0 11 18321987 NT_009237.19 18261987
ss5605476 GTF2H1-000497 A/G 172 rs4150528 0 11 18322038 NT_009237.19 18262038
ss5605477 GTF2H1-000605 A/C 166 rs4150529 0 11 18322146 NT_009237.19 18262146
ss5605478 GTF2H1-000606 G/T 174 rs4150530 0 11 18322147 NT_009237.19 18262147
ss5605479 GTF2H1-000734 C/G 168 rs3825025 1 11 18322275 NT_009237.19 18262275
ss5605480 GTF2H1-000759 A/G 166 rs4150531 0 11 18322300 NT_009237.19 18262300
ss5605481 GTF2H1-000790 A/G 166 rs3802968 1 11 18322331 NT_009237.19 18262331
ss5605482 GTF2H1-000800 C/T 174 rs4150532 0 11 18322341 NT_009237.19 18262341
ss5605483 GTF2H1-000945 A/T 170 rs4150533 0 11 18322486 NT_009237.19 18262486
ss5605484 GTF2H1-000976 C/T 170 rs3802967 1 11 18322517 NT_009237.19 18262517
ss5605485 GTF2H1-000983 A/G 172 rs4150534 0 11 18322524 NT_009237.19 18262524
ss5605486 GTF2H1-001082 A/G 172 rs4150535 0 11 18322623 NT_009237.19 18262623
ss5605487 GTF2H1-001263 A/G 174 rs4150536 0 11 18322804 NT_009237.19 18262804
ss5605488 GTF2H1-001527 C/G 178 rs4150537 0 11 18323068 NT_009237.19 18263068
ss5605489 GTF2H1-001814 -/T 164 rs4150538 0 11 18323354 NT_009237.19 18263354
ss5605490 GTF2H1-002018 C/T 174 rs4150539 0 11 18323558 NT_009237.19 18263558
ss5605491 GTF2H1-002263 -/AGTTTGAAAAC 174 rs4150540 0 11 18323803 NT_009237.19 18263803
ss5605492 GTF2H1-002686 A/T 172 rs4150541 0 11 18324226 NT_009237.19 18264226
ss5605493 GTF2H1-002761 A/G 174 rs4150542 0 11 18324301 NT_009237.19 18264301
ss5605494 GTF2H1-003165 C/T 160 rs4150543 0 11 18324705 NT_009237.19 18264705
ss5605495 GTF2H1-003184 -/AGTAGTTCCTCTT 162 rs375291223 0 11 18324724 NT_009237.19 18264724
ss5605496 GTF2H1-003712 A/G 180 rs4150545 0 11 18325252 NT_009237.19 18265252
ss5605497 GTF2H1-003825 A/G 180 rs4150546 0 11 18325365 NT_009237.19 18265365
ss5605498 GTF2H1-004186 A/T 166 rs4150547 0 11 18325726 NT_009237.19 18265726
ss5605499 GTF2H1-004449 A/C 180 rs4150548 0 11 18325989 NT_009237.19 18265989
ss5605500 GTF2H1-007639 -/TAT 130 rs4150549 0 11 18329178 NT_009237.19 18269178
ss5605501 GTF2H1-007814 C/G 108 rs4150550 0 11 18329351 NT_009237.19 18269351
ss5605502 GTF2H1-008004 C/T 174 rs4150551 0 11 18329541 NT_009237.19 18269541
ss5605503 GTF2H1-008725 C/T 176 rs4150552 0 11 18330262 NT_009237.19 18270262
30 of 165 subsnp's starting at ss5605474. ss# starting at ss

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