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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:OGG1-PDR90-062602
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:33


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss4480351 OGG1-000285 C/T 158 rs159153 0 3 9748191 NT_022517.19 9738191
ss4480352 OGG1-000313 A/G 170 rs3218993 0 3 9748219 NT_022517.19 9738219
ss4480353 OGG1-000767 C/T 170 rs3218994 0 3 9748673 NT_022517.19 9738673
ss4480354 OGG1-000870 A/G 180 rs3218995 0 3 9748776 NT_022517.19 9738776
ss4480355 OGG1-000888 A/G 178 rs125701 0 3 9748794 NT_022517.19 9738794
ss4480356 OGG1-000940 C/T 178 rs3218996 0 3 9748846 NT_022517.19 9738846
ss4480357 OGG1-001754 C/T 150 rs3218997 0 3 9749660 NT_022517.19 9739660
ss4480358 OGG1-002077 -/AGA 174 rs3218998 0 3 9749983 NT_022517.19 9739983
ss4480359 OGG1-002101 A/G 170 rs3218999 0 3 9750007 NT_022517.19 9740007
ss4480360 OGG1-002363 G/T 150 rs1801126 0 3 9750269 NT_022517.19 9740269
ss4480361 OGG1-002812 -/C 134 rs3219000 0 3 9750717 NT_022517.19 9740717
ss4480362 OGG1-002828 C/T 154 rs3219001 0 3 9750733 NT_022517.19 9740733
ss4480363 OGG1-003413 C/G 162 rs3219002 0 3 9751318 NT_022517.19 9741318
ss4480364 OGG1-004611 C/T 168 rs3219003 0 3 9752516 NT_022517.19 9742516
ss4480365 OGG1-004751 A/G 168 rs3219004 0 3 9752656 NT_022517.19 9742656
ss4480366 OGG1-004931 A/C 168 rs3219005 0 3 9752836 NT_022517.19 9742836
ss4480367 OGG1-005859 A/G 174 rs3219006 0 3 9753764 NT_022517.19 9743764
ss4480368 OGG1-005924 A/G 174 rs3219007 0 3 9753829 NT_022517.19 9743829
ss4480369 OGG1-005954 A/G 164 rs3219008 0 3 9753859 NT_022517.19 9743859
ss4480370 OGG1-006350 A/G 154 rs3219009 0 3 9754255 NT_022517.19 9744255
ss4480371 OGG1-006537 A/G 156 rs159150 1 3 9754442 NT_022517.19 9744442
ss4480372 OGG1-006919 A/G 156 rs1805373 0 3 9754824 NT_022517.19 9744824
ss4480373 OGG1-007224 A/G 180 rs3219010 0 3 9755129 NT_022517.19 9745129
ss4480374 OGG1-008253 A/G 168 rs3219011 0 3 9756158 NT_022517.19 9746158
ss4480375 OGG1-008551 C/G 180 rs2072668 0 3 9756456 NT_022517.19 9746456
ss4480376 OGG1-008681 C/T 180 rs3219012 0 3 9756586 NT_022517.19 9746586
ss4480377 OGG1-009151 C/T 158 rs3219013 0 3 9757056 NT_022517.19 9747056
ss4480378 OGG1-009171 A/G 154 rs3219014 0 3 9757076 NT_022517.19 9747076
ss4480379 OGG1-009184 C/G 154 rs1052133 0 3 9757089 NT_022517.19 9747089
ss4480380 OGG1-009524 A/G 160 rs293795 1 3 9757429 NT_022517.19 9747429
30 of 33 subsnp's starting at ss4480351. ss# starting at ss

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