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Submitted SNP(ss) Details: ss243648           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-33242
RefSNP(rs#)rs183671
Submitted Batch IDOVLP-000621-9
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/!a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:CITB-H1_2376B17 SequenceAccession1:AC008971 SequenceContigName1:Contig77 SequenceContigPosition1:25344 SequenceLocalName2:CITB-H1_2075C7 SequenceAccession2:AC026707 SequenceContigName2:Contig26 SequenceContigPosition2:5674 PolyBayesConfidence:91

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss243648|allelePos=101|len=406|taxid=9606|alleles='T/G'|mol=Genomic
 CACCTCCAAA ACCTGGAAAG CAAGAAAAGC TATGTTAGCA TATTTAGCAA ATTATCGTTT
 CATTTTCCTC ATGCATGACA CTCCCCTTCA GTGGGAAAAC
 K
 CCCTGAAGAC AGCAGAGGCA ACCTGGATAT GATTGGAAAA GCAATACAGC AAGAGGCTGA
 AAAACACACA GCCAGGCAAT GTGGGTTCAA GTTTTGGCTC TAGCATTTAC TTGCTGTGAT
 CTTGGGCTTC CTCACCCAGA ACATGGAGGT AATAGTAAAA GAGTAACCTA CTAGTAGGGT
 CATGATTTGA AAATAGAAAG TGTTCAGGAT GGGGCCAGAC ACATAGCAAG GGCTTACTAA
 GTATTGCTAC CATCAGAGAT ACTGTGACCT TTCCAAAGTG CATTCTCTAG ACTGCTTTTG
 AACTT

  Submitted Frequency for ss243648 back to top
There is no frequency submission for ss243648.


  dbSNP summary of Genotypes for ss243648 back to top
No sufficient data to compute Hardy-weinberg probability for ss243648.


  Submitted individual genotype for ss243648 back to top
There is no individual genotype data for ss243648.

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