NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss22011820           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr3.chr3.NT_022459.13_13298752
RefSNP(rs#)rs7617400
Submitted Batch IDWGSA-200403-chr3
Submitted DateMar 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01034543.1 1138

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss22011820|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TTAGGAAGAT ATTTGATACA GTGGAAAGAG CATTTTAGTT GGAATCAGAA GAAGTATGTG
 TTAATCATCT TGGAGATATG GACAAATCCC TTAAACGTTT GAACATTGCT TTCTAATCTA
 TGAAGTAATC AATATCTAAC TCAGAACTTA CTGTGAGAAG TAACACAGAA TAAAGGTTGA
 CAATTCTAAC ATCAATCTGG
 Y
 GTGTAGAAGA TAAATATTTG TTGAAAATGT CTAAGAGCTT AGCCTGAGAA CAACTAAACT
 AGCAGGATAC ATGTAATGAC TGAATTTGGG TAGAGAAAAA TGTTGAGGTA AGGTGGTCCT
 AAGCTTTGGA GTGACAATGG GAAAAGAAAA TGAAAACACT ACTGAGTGTC TCCAAAGACT
 TTTAGTCATA TGGTTTCATG

  Submitted Frequency for ss22011820 back to top
There is no frequency submission for ss22011820.


  dbSNP summary of Genotypes for ss22011820 back to top
No sufficient data to compute Hardy-weinberg probability for ss22011820.


  Submitted individual genotype for ss22011820 back to top
There is no individual genotype data for ss22011820.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement