Submitted SNP(ss) Details: ss16745098

Submitted SNP(ss) Details: ss16745098

Submitter
Handle	CSHL-HAPMAP
Submitter SNP ID	CSHL-HuAA-200402.chr17.NT_010718.14_16250566
RefSNP(rs#)	rs7946
Submitted Batch ID	CSHL-HuAA-200402
Submitted Date	Feb 17, 2004
Publication Cited	[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Feb 17 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_010718
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CSHL-HUAA-200402
Ascertainment Samplesize	5
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence position qualityHuAA506s19600402993896.R -158 57HuAA505s19600402544220.R 111 57HuAA505s19600402629083.F 378 48HuAA505s19600402268462.F -520 31

Fasta sequence (Legend)

 CCTGCTGGGT CCTGCAGGCC GCATTGTAAG CTACCATGGC CGCTCTGACC TGGGAGCCCT
 GGAGTGGGCC TGGCTGACGG CAGCCTGTCC TGAGCCTGCC CTGGCCACAA GGAAAGGTTC
 TAGAGGGAGA GACAGGGCCA GTCGGGCAGC CACGCCCCCA CCCGCCGCAG CCCCTACTCA
 CTCTTCGTAT AGGAGAGCCA
 Y
 TATGTAGGTG AGGGCCACCA GCACCGTCAG GAGCAGGCCC GTGGGGCTGG CGTGCCTGAA
 AGGACAGAGG CAGGTCAGGC CTGGCTGGAG CCAGGGTCTC TCAGGGCCAC GGCCCACCTG
 CCCAGGCTGG CCCTTCCTGC CGTGACCCTG GCCCTCCGGC CGACGCTGGG CCACTTGGGC
 CGACCGAGCC CAGGCAGCAC

Submitted Frequency for ss16745098

There is no frequency submission for ss16745098.

dbSNP summary of Genotypes for ss16745098

No sufficient data to compute Hardy-weinberg probability for ss16745098.

Submitted individual genotype for ss16745098

There is no individual genotype data for ss16745098.

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