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Submitted SNP(ss) Details: ss16392629           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_021877.16_13129126
RefSNP(rs#)rs2820464
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA506s19600402846220.R 202 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16392629|allelePos=253|len=453|taxid=9606|alleles='G/A'|mol=Genomic
 TTTAATCATG GGAATATGGC ATATACATGG GGACTTAGAG AAGGGGTGAC AGGGCAAAGG
 TAACCAAATC TTAATAAGTG TTTCCCACTA GTCTAGTTTC TCTAGGCCAT CAAGCAATAC
 ATCCCTGATC TTTAAGCATG ATACGgtgtg tatgtgtgaa ttgtgtgtga gtgtgtgtgc
 ttgtgtgagt gtgggtgGAG TACAAACTAA AGCAAAAGAG CGTATGTTTC CCTTCTGGCT
 CAGATTGCAT TC
 R
 TAGATATAAT TATTTGTTTA ACATAGCCAC ACAATATTAT ATTACATCCT ATGATTTATT
 AGCAAAAGCA CGCTCTTTAA ACTTCATTTT CCCAAGCAAT GATAATTTCT TGACATGTTT
 CATTACTGGG AAATGACATA GACATTTGTT ATATTCTCAG ACAATAAAAT ATTACCCTGC
 TCACATACCT TCATGGAATA

  Submitted Frequency for ss16392629 back to top
There is no frequency submission for ss16392629.


  dbSNP summary of Genotypes for ss16392629 back to top
No sufficient data to compute Hardy-weinberg probability for ss16392629.


  Submitted individual genotype for ss16392629 back to top
There is no individual genotype data for ss16392629.

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