NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss78512370           
Submitter
HandleHGSV
Submitter SNP IDCor18507_SNV_20070510.chr18_60028757
RefSNP(rs#)rs8093550
Submitted Batch IDNA18507-Fosmids-20070510
Submitted DateOct 19, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 19 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality63169358 97 6163146976 -244 62

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78512370|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCAGGGAAGT ACAGGGATGA AAAAAAAAGA CAAAGACCAA GATTTCACAC CAAAATAAAA
 TTTTAGGCGA ATGCATGATG TATTATTTTC ATTAGAATTC AGGAACGTGA AGTGTAGATG
 CTGTGTTCTG TTAATCCTTA AATCAGGTTT TCTGTAGGTT CCATGCATGT AGCCCTGTTG
 AGCGTCCTGG CTGTGACTTA
 Y
 CAGCTCTGTC CCCTTTCACA GGGAAGACCA GAGGCTTCAG CTCTTTCATG AATTTCCCCT
 GAGGGATAAA GTGGCTAGTT ATGCAGAATA AATTAAACAG CCTGGGAAAT AAAAAAAAAG
 GCTATCACCA CTGTGATGAT TCCATTTAGT GTGGCAAATT TGATTTCAGA AGCGGCACAG
 AGGTGTGAAG TCAAAGGTTA

  Submitted Frequency for ss78512370 back to top
There is no frequency submission for ss78512370.


  dbSNP summary of Genotypes for ss78512370 back to top
No sufficient data to compute Hardy-weinberg probability for ss78512370.


  Submitted individual genotype for ss78512370 back to top
There is no individual genotype data for ss78512370.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement