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Submitted SNP(ss) Details: ss78421946           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr19_46552136
RefSNP(rs#)rs1800469
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88101070 -317 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78421946|allelePos=201|len=621|taxid=9606|alleles='A/G'|mol=Genomic
 GGGCGGTGTG GGTCACCAGA GAAAGAGGAC CAGGCGGAGA AGGCTTAATC CGGGGGATGA
 GACACAGGGG AGCCGACCAG AGGAGGGGGA CCCAGAACGG AAGGAGAGTC AGGCTGGGAA
 ACAAGGTAGG AGAAGAGGGT CTGTCAACAT GGGGGCCTCC GGAGGGTGTC AGTGGGAGGA
 GGGGGCAACA GGACACCTGA
 R
 GGATGGAAGG GTCAGGAGGC AGACACCTGT AAGAATTGCT CTCCTTTACT GAGCACCTCC
 CATGTGGCTA AGCAGCCTCC TGTCACTCAA CACCCTGCGA CCCCATACAT TTACTGTCCC
 CAATTTACAG ATAGGGAAAC TGGGCCCAGA GGGACCCCGA GGTCCTAGAA AGGACAGAAG
 CGGTGCCATG CCTTAGCTGG GGTCAGCTCT GACAGTCTCT AGAGTCTGTG CTCTTGACCA
 CTGTGCCATC CTCCCCCATC ACTGGGTGTC CGGGGTGTGG ATGGTGGTGA CGTTGGAGGC
 AGAGTCCCTC AGCACTCCAC GCCGTAGCGG TCGAAGTTGC GGAGCAGCAG GCCGATCTCC
 AGGTGCACGG TGCCACCAGC AGCTGTGTGC AGGCGATAGC GGTCGGCCCC ACTGTAGATG

  Submitted Frequency for ss78421946 back to top
There is no frequency submission for ss78421946.


  dbSNP summary of Genotypes for ss78421946 back to top
No sufficient data to compute Hardy-weinberg probability for ss78421946.


  Submitted individual genotype for ss78421946 back to top
There is no individual genotype data for ss78421946.

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