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Submitted SNP(ss) Details: ss3474289           
Submitter
HandleSC_JCM
Submitter SNP IDAL157880.14_7139
RefSNP(rs#)rs699
Submitted Batch ID21-SEP-2001b
Submitted DateSep 24, 2001
Publication Cited[1] Clone overlap SNPs detected from the public human 16-May-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPSep 24 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginT:Germline C:Germline
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL157880.14position:7139unfin_quality:99seqversion:AL512328.7position:-119159unfin_quality:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3474289|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCAGCTGCTG CTGTCCACGG TGGTGGGCGT GTTCACAGCC CCAGGCCTGC ACCTGAAGCA
 GCCGTTTGTG CAGGGCCTGG CTCTCTATAC CCCTGTGGTC CTCCCACGCT CTCTGGACTT
 CACAGAACTG GATGTTGCTG CTGAGAAGAT TGACAGGTTC ATGCAGGCTG TGACAGGATG
 GAAGACTGGC TGCTCCCTGA
 Y
 GGGAGCCAGT GTGGACAGCA CCCTGGCTTT CAACACCTAC GTCCACTTCC AAGGTAAGGC
 AAACCTCTCT GCTGGCTCTG GCCCTAGGAC TTAGTATCCA ATGTGTAGCT GAGATCAGCC
 AGTCAGGCCT TGGAGATGGG CAGGGGGCAG CCCTGCGGAC ATACCTGGTG ACCACCCTTG
 AGAAGTGGGG AAGTGGCTGC

  Submitted Frequency for ss3474289 back to top
There is no frequency submission for ss3474289.


  dbSNP summary of Genotypes for ss3474289 back to top
No sufficient data to compute Hardy-weinberg probability for ss3474289.


  Submitted individual genotype for ss3474289 back to top
There is no individual genotype data for ss3474289.

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