NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1690002468           
Submitter
HandleEVA_EXAC
Submitter SNP IDEVA_EXAC_5160665
RefSNP(rs#)rs146619916
Submitted Batch IDEXAC_0.3
Submitted DateMar 04, 2015
Publication CitedN.D.
First entry to dbSNPMar 4 2015 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
genomic
MethodEXAC_0.3
Ascertainment Samplesize60706
PopulationExAc_Aggregated_Populations
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1690002468|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 TTTGGAACAA CTTAAATACA TCGGG
 Y
 GTGTTATTAA GGAGACCCTT CGACT

  Submitted Frequency for ss1690002468 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
ExAc_Aggregated_Populations121362T=0.99986815
C=0.00013184
EXAC_0.3EVA_EXAC


  dbSNP summary of Genotypes for ss1690002468 back to top
No sufficient data to compute Hardy-weinberg probability for ss1690002468.


  Submitted individual genotype for ss1690002468 back to top
There is no individual genotype data for ss1690002468.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement