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Submitted SNP(ss) Details: ss16861693           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr2.NT_022184.13_26519432
RefSNP(rs#)rs2303428
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginG:Germline T:Germline A:Germline C:Germline
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402179936.R -405 50

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16861693|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AAGATATATA ATAGCATTGC TTTTGGGGGT AATATGGGCA GTAACTCTGT CCACATCTTT
 GGGCAGGCTG TGGTTCTGCC TTTATATGCT ATGTCAGTGT AAACCTACGC GATTAATCAT
 CAGTGTACAG TTTAGGACTA ACAATCCATT TATTAGTAGC AGAAAGAAGT TTAAAATCTT
 GCTTTCTGAT ATAATTTGTT
 Y
 TGTAGGCCCC AATATGGGAG GTAAATCAAC ATATATTCGA CAAACTGGGG TGATAGTACT
 CATGGCCCAA ATTGGGTGTT TTGTGCCATG TGAGTCAGCA GAAGTGTCCA TTGTGGACTG
 CATCTTAGCC CGAGTAGGGG CTGGTGACAG TCAATTGAAA GGAGTCTCCA CGTTCATGGC
 TGAAATGTTG GAAACTGCTT

  Submitted Frequency for ss16861693 back to top
There is no frequency submission for ss16861693.


  dbSNP summary of Genotypes for ss16861693 back to top
No sufficient data to compute Hardy-weinberg probability for ss16861693.


  Submitted individual genotype for ss16861693 back to top
There is no individual genotype data for ss16861693.

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