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Submitted SNP(ss) Details: ss164689278           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr2_162832297
RefSNP(rs#)rs1990760
Submitted Batch IDNA19240_snpassay_chr2
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss164689278|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GTTGAATTAT TTTTGAAAAC CACTACAAAA TTCCTTATTT TGAGACAAGG CAAATCTAAG
 CCTTTGTGCA CCATCATTGT TCCCCAAGCC TGGAAAACAA AAGAGAGAGC AAGAGGAAAA
 TTAAATGTAC ATGCAATTAA ACATTCCTGT TGGCTAAAGT AAAATCTGGC CCACAGCAAT
 TTACTCACCT GGCCACATTT GCAGATGATT TCACCATTTA TTTGATAGTC GGCACACTTC
 TTTTGCAGTG
 Y
 TTTGTTTTCT CTTACAATGT AAAGTTCCCT ATAAGTATCA AAGGGAAAGA ATCATCATGG
 AGAACTGACA AAATACCAGT GTGTAGTTCA TGGGTTATTG GACCTGGAGC TCATCCGCAT
 GCCTGCGGTA TTCTACACGG CATTCCTTCC TTCCCTCCTG CTTCCCAGGC TTGTTATTGC
 AACTAAGGCA ATGCTTCTCT TCTACACATA CCTCTCAAGG GGCATGTTGC CTTTCATAAC
 TTCTTTCAAG

  Submitted Frequency for ss164689278 back to top
There is no frequency submission for ss164689278.


  dbSNP summary of Genotypes for ss164689278 back to top
No sufficient data to compute Hardy-weinberg probability for ss164689278.


  Submitted individual genotype for ss164689278 back to top
There is no individual genotype data for ss164689278.

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