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Submitted SNP(ss) Details: ss1129522           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-357510
RefSNP(rs#)rs294636
Submitted Batch IDOVLP-000804-101
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC024545 SequenceAccession1:AC024545 SequenceVersion1:2 SequenceContigName1:Contig53 SequenceContigPosition1:7220 SequenceLocalName2:AC025163 SequenceAccession2:AC025163 SequenceVersion2:14 SequenceContigName2:Contig4 SequenceContigPosition2:15551 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1129522|allelePos=248|len=364|taxid=9606|alleles='A/C'|mol=Genomic
 CTGGATGAGG TGTTATCTTC AGGTGGATTC CTTGAGCATA CCAATATACT ACATATGAGA
 AAGCCCTCTA ACCCAACTAC CTACccatcc actcattcac ccatctatct attcatctat
 ctatccatcc atccatccat ccatccatcc atccatccat ccacccaccc acccGCTTCA
 GGACACTGGA CATCTGAcca tccactcacc cttccagcca tccttccatc tactcactca
 gccatcc
 M
 tccttctcac ccatccCCTC ACACTCACTC ACCAAATATG GCTCAGCTTC TACTTCATGG
 AGCTAACACA AGGAGGGATC AAAGATGACT CAGGTACTCT CTCTGGCCTC AGACAC

  Submitted Frequency for ss1129522 back to top
There is no frequency submission for ss1129522.


  dbSNP summary of Genotypes for ss1129522 back to top
No sufficient data to compute Hardy-weinberg probability for ss1129522.


  Submitted individual genotype for ss1129522 back to top
There is no individual genotype data for ss1129522.

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