>gnl|dbSNP|ss8270394|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic
TTATACCCAG TGTGCCCAGT ctattaatct gccttttttg agttgatttt tcagtaaacc
ttcagagggc gaaggggagg ttttcccttg gcccctaccc tggattcaaa tcctagctcc
cacttcccaa caatgtgact ttgggcaagt caggtaacct ggttctcttc tataatgtga
gggaaccatt ctagcactta acctcaatca tactgcatta ccttgttctg aagtttaaat
gagaaattct tagactagcc ttcagcatgt agtaaagcag gccataaatg tcagatatta
tCATAATCTC CAGATTTTCT ACAGTGATTC TTGAATGACA TTTAAGATCA GAAACATCCA
TGTAATTCTC ATATTACTAT CATTGTTATG TATTCTTTCT
Y
TCCGAATGAA GAATGAAGGT ACCATCCACT GACACCACAG TCACGAGGTT GGGTCAAGCC
TTATGACCAC CCTAGAAGCC TAGACAGAAG GGTTCAAAGG CTCTTCCTCT CATATGGGCT
AGTAATAAAC AGGGTCTCTA ACAGAATAGC GGAAACCTGA GTTGAGCATG TTCATGAGGG
AGGGGAAGCT GACGCCCACA TCAGCACTTG TTTTCGAAGA GGAGCTGTCT Tggcccagag
ccgtggctca cgcctgtaat cccagtattt tgggaggcca aagtgggaga attgcttgag
cccaagagtt caagtctagc ctgggcaaca tagtgagacc gtgtctctag aaaaaattta
aaaaattaga caggcatggt ggtgtgtgcc tgtgatccca
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.76106197
| C=0.23893805 | T/T=0.67256635
C/T=0.17699115
C/C=0.15044248
| Pr(chiSq=29.779,df=1)
=0.001 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 84 | 84 | C=0.82142860
| T=0.17857143 | C/C=0.73809522
C/T=0.16666667
T/T=0.09523810
| Pr(chiSq=7.834,df=1)
=0.010 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | C=0.79069769
| T=0.20930232 | C/C=0.70930231
C/T=0.16279070
T/T=0.12790698
| Pr(chiSq=22.208,df=1)
=0.001 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.78761059
| C=0.21238938 | T/T=0.66371679
C/T=0.24778761
C/C=0.08849557
| Pr(chiSq=7.601,df=1)
=0.010 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.82653064
| C=0.17346939 | T/T=0.73469388
C/T=0.18367347
C/C=0.08163265
| Pr(chiSq=6.332,df=1)
=0.020 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.79268295
| T=0.20731707 | C/C=0.70731705
C/T=0.17073171
T/T=0.12195122
| Pr(chiSq=9.468,df=1)
=0.003 | Genotype
Freq. |
| HAPMAP-CHD | 166 | 166 | C=0.74698794
| T=0.25301206 | C/C=0.66265059
C/T=0.16867469
T/T=0.16867469
| Pr(chiSq=25.452,df=1)
=0.001 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.53977275
| T=0.46022728 | C/C=0.42045453
T/T=0.34090909
C/T=0.23863636
| Pr(chiSq=23.767,df=1)
=0.001 | Genotype
Freq. |
| HAPMAP-LWK | 178 | 178 | T=0.75842696
| C=0.24157304 | T/T=0.65168542
C/T=0.21348314
C/C=0.13483146
| Pr(chiSq=15.506,df=1)
=0.001 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.60000002
| C=0.40000001 | T/T=0.46000001
C/T=0.28000000
C/C=0.25999999
| Pr(chiSq=8.681,df=1)
=0.005 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.71678323
| C=0.28321677 | T/T=0.61538464
C/T=0.20279720
C/C=0.18181819
| Pr(chiSq=35.823,df=1)
=0.001 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.71590906
| C=0.28409091 | T/T=0.62500000
C/C=0.19318181
C/T=0.18181819
| Pr(chiSq=26.913,df=1)
=0.001 | Genotype
Freq. |
