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Submitted SNP(ss) Details: ss2580301           
Submitter
HandleSC_JCM
Submitter SNP IDAL035530.11_27844
RefSNP(rs#)rs1738074
Submitted Batch ID02-NOV-2000
Submitted DateNov 03, 2000
Publication CitedN.D.
First entry to dbSNPNov 3 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL035530.11position:27844seqversion:AC024402.3position:26115unfin_quality:26

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2580301|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 CTGCCCTAAA AGGAATGAGG AAGCGAGAGC TCTCCAGTGT CTGGCTGGCT CCGTCCGTGT
 GACAGCCCAT GATGTTCTTT CCGGTCTCTG TAATATTCTG AATTTCCACC TGCCCGCCCC
 TTCGCTTATA ATGCAGAGCA TGTGAAGGGA GACCGGCTCG GTCTCTCTCT CTCCCAGTGG
 ACTAGAAGGA GCAGAGAGTT
 R
 TGCTGTTTCT CCCATTCTTT ACAGCTCACC GGATGTAAAA GAACTCTGGC TAGAGACCCT
 CCAAGGGTAA GTACACTATA TATTAACATG CCTAGAAATT ACAAGCTGCC TCGCAAGTCA
 CAGGTCACTC AGATCACAGG CAACAGAAAA CAGCTATCCC GTGGAATATG CTCTCACTTT
 ATAAAGTCTC AGGACAAAGC

  Submitted Frequency for ss2580301 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
CEPH
MULTI-NATIONAL
184A=0.50000000
G=0.50000000
0.500 +/-01_2004SEQUENOM


  dbSNP summary of Genotypes for ss2580301 back to top
No sufficient data to compute Hardy-weinberg probability for ss2580301.


  Submitted individual genotype for ss2580301 back to top
There is no individual genotype data for ss2580301.

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