Name: rs933399
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs933399

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr12:111369695 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A / G>C / G>T
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.451868 (119605/264690, TOPMED)
A=0.278641 (39523/141842, ALFA)
A=0.413698 (57873/139892, GnomAD) (+ 18 more)
G=0.07746 (2189/28258, 14KJPN)
G=0.07751 (1299/16760, 8.3KJPN)
G=0.3774 (2417/6404, 1000G_30x)
G=0.3754 (1880/5008, 1000G)
A=0.2533 (1135/4480, Estonian)
A=0.2426 (935/3854, ALSPAC)
A=0.2236 (829/3708, TWINSUK)
G=0.0546 (160/2930, KOREAN)
G=0.0551 (101/1832, Korea1K)
G=0.3333 (596/1788, HapMap)
A=0.270 (269/998, GoNL)
G=0.042 (33/790, PRJEB37584)
A=0.218 (131/600, NorthernSweden)
G=0.225 (97/432, SGDP_PRJ)
G=0.468 (101/216, Qatari)
G=0.136 (29/214, Vietnamese)
A=0.30 (12/40, GENOME_DK)
G=0.25 (8/32, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PHETA1 : 2KB Upstream Variant
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	141842	G=0.721359	A=0.278641
European	Sub	121168	G=0.763791	A=0.236209
African	Sub	6640	G=0.2949	A=0.7051
African Others	Sub	242	G=0.165	A=0.835
African American	Sub	6398	G=0.2998	A=0.7002
Asian	Sub	628	G=0.073	A=0.927
East Asian	Sub	496	G=0.060	A=0.940
Other Asian	Sub	132	G=0.121	A=0.879
Latin American 1	Sub	748	G=0.612	A=0.388
Latin American 2	Sub	6278	G=0.4947	A=0.5053
South Asian	Sub	184	G=0.402	A=0.598
Other	Sub	6196	G=0.6666	A=0.3334

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.548132	A=0.451868
Allele Frequency Aggregator	Total	Global	141842	G=0.721359	A=0.278641
Allele Frequency Aggregator	European	Sub	121168	G=0.763791	A=0.236209
Allele Frequency Aggregator	African	Sub	6640	G=0.2949	A=0.7051
Allele Frequency Aggregator	Latin American 2	Sub	6278	G=0.4947	A=0.5053
Allele Frequency Aggregator	Other	Sub	6196	G=0.6666	A=0.3334
Allele Frequency Aggregator	Latin American 1	Sub	748	G=0.612	A=0.388
Allele Frequency Aggregator	Asian	Sub	628	G=0.073	A=0.927
Allele Frequency Aggregator	South Asian	Sub	184	G=0.402	A=0.598
gnomAD - Genomes	Global	Study-wide	139892	G=0.586302	A=0.413698
gnomAD - Genomes	European	Sub	75816	G=0.76666	A=0.23334
gnomAD - Genomes	African	Sub	41860	G=0.28927	A=0.71073
gnomAD - Genomes	American	Sub	13630	G=0.55172	A=0.44828
gnomAD - Genomes	Ashkenazi Jewish	Sub	3320	G=0.8530	A=0.1470
gnomAD - Genomes	East Asian	Sub	3122	G=0.0551	A=0.9449
gnomAD - Genomes	Other	Sub	2144	G=0.5882	A=0.4118
14KJPN	JAPANESE	Study-wide	28258	G=0.07746	A=0.92254
8.3KJPN	JAPANESE	Study-wide	16760	G=0.07751	A=0.92249
1000Genomes_30x	Global	Study-wide	6404	G=0.3774	A=0.6226
1000Genomes_30x	African	Sub	1786	G=0.1988	A=0.8012
1000Genomes_30x	Europe	Sub	1266	G=0.7520	A=0.2480
1000Genomes_30x	South Asian	Sub	1202	G=0.3977	A=0.6023
1000Genomes_30x	East Asian	Sub	1170	G=0.0915	A=0.9085
1000Genomes_30x	American	Sub	980	G=0.536	A=0.464
1000Genomes	Global	Study-wide	5008	G=0.3754	A=0.6246
1000Genomes	African	Sub	1322	G=0.2057	A=0.7943
1000Genomes	East Asian	Sub	1008	G=0.0883	A=0.9117
1000Genomes	Europe	Sub	1006	G=0.7545	A=0.2455
1000Genomes	South Asian	Sub	978	G=0.398	A=0.602
1000Genomes	American	Sub	694	G=0.535	A=0.465
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.7467	A=0.2533
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.7574	A=0.2426
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.7764	A=0.2236
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.0546	A=0.9454, C=0.0000, T=0.0000
Korean Genome Project	KOREAN	Study-wide	1832	G=0.0551	A=0.9449
HapMap	Global	Study-wide	1788	G=0.3333	A=0.6667
HapMap	African	Sub	692	G=0.212	A=0.788
HapMap	American	Sub	666	G=0.441	A=0.559
HapMap	Asian	Sub	254	G=0.079	A=0.921
HapMap	Europe	Sub	176	G=0.767	A=0.233
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.730	A=0.270
CNV burdens in cranial meningiomas	Global	Study-wide	790	G=0.042	A=0.958
CNV burdens in cranial meningiomas	CRM	Sub	790	G=0.042	A=0.958
Northern Sweden	ACPOP	Study-wide	600	G=0.782	A=0.218
SGDP_PRJ	Global	Study-wide	432	G=0.225	A=0.775
Qatari	Global	Study-wide	216	G=0.468	A=0.532
A Vietnamese Genetic Variation Database	Global	Study-wide	214	G=0.136	A=0.864
The Danish reference pan genome	Danish	Study-wide	40	G=0.70	A=0.30
Siberian	Global	Study-wide	32	G=0.25	A=0.75

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 12	NC_000012.12:g.111369695G>A
GRCh38.p14 chr 12	NC_000012.12:g.111369695G>C
GRCh38.p14 chr 12	NC_000012.12:g.111369695G>T
GRCh37.p13 chr 12	NC_000012.11:g.111807499G>A
GRCh37.p13 chr 12	NC_000012.11:g.111807499G>C
GRCh37.p13 chr 12	NC_000012.11:g.111807499G>T
PHETA1 RefSeqGene	NG_021347.1:g.4427C>T
PHETA1 RefSeqGene	NG_021347.1:g.4427C>G
PHETA1 RefSeqGene	NG_021347.1:g.4427C>A

Gene: PHETA1, PH domain containing endocytic trafficking adaptor 1 (minus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
PHETA1 transcript variant 1	NM_001177996.3:c.	N/A	Upstream Transcript Variant
PHETA1 transcript variant 3	NM_001177997.3:c.	N/A	Upstream Transcript Variant
PHETA1 transcript variant 2	NM_144671.6:c.	N/A	Upstream Transcript Variant
PHETA1 transcript variant X1	XM_006719257.4:c.	N/A	Upstream Transcript Variant
PHETA1 transcript variant X3	XM_017018883.2:c.	N/A	Upstream Transcript Variant
PHETA1 transcript variant X2	XM_011537976.3:c.	N/A	N/A

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A	C	T
GRCh38.p14 chr 12	NC_000012.12:g.111369695=	NC_000012.12:g.111369695G>A	NC_000012.12:g.111369695G>C	NC_000012.12:g.111369695G>T
GRCh37.p13 chr 12	NC_000012.11:g.111807499=	NC_000012.11:g.111807499G>A	NC_000012.11:g.111807499G>C	NC_000012.11:g.111807499G>T
PHETA1 RefSeqGene	NG_021347.1:g.4427=	NG_021347.1:g.4427C>T	NG_021347.1:g.4427C>G	NG_021347.1:g.4427C>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

107 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss1372453	Oct 05, 2000 (86)
2	BCM_SSAHASNP	ss11027922	Jul 11, 2003 (116)
3	CSHL-HAPMAP	ss19259078	Feb 27, 2004 (120)
4	PERLEGEN	ss23318711	Sep 20, 2004 (123)
5	ABI	ss40217390	Mar 14, 2006 (126)
6	ILLUMINA	ss65754070	Oct 16, 2006 (127)
7	ILLUMINA	ss74895992	Dec 06, 2007 (129)
8	HGSV	ss80184478	Dec 14, 2007 (130)
9	BGI	ss105122183	Dec 01, 2009 (131)
10	1000GENOMES	ss112443835	Jan 25, 2009 (130)
11	1000GENOMES	ss114107067	Jan 25, 2009 (130)
12	KRIBB_YJKIM	ss119374309	Dec 01, 2009 (131)
13	ILLUMINA-UK	ss119714996	Dec 01, 2009 (131)
14	GMI	ss157912194	Dec 01, 2009 (131)
15	ILLUMINA	ss160978391	Dec 01, 2009 (131)
16	ENSEMBL	ss161481085	Dec 01, 2009 (131)
17	COMPLETE_GENOMICS	ss168718332	Jul 04, 2010 (132)
18	COMPLETE_GENOMICS	ss170881451	Jul 04, 2010 (132)
19	ILLUMINA	ss174816015	Jul 04, 2010 (132)
20	BUSHMAN	ss198694696	Jul 04, 2010 (132)
21	1000GENOMES	ss225963142	Jul 14, 2010 (132)
22	1000GENOMES	ss236089909	Jul 15, 2010 (132)
23	1000GENOMES	ss242616696	Jul 15, 2010 (132)
24	BL	ss255347105	May 09, 2011 (134)
25	GMI	ss281548736	May 04, 2012 (137)
26	GMI	ss286627365	Apr 25, 2013 (138)
27	PJP	ss291341049	May 09, 2011 (134)
28	ILLUMINA	ss410799985	Sep 17, 2011 (135)
29	ILLUMINA	ss481872055	May 04, 2012 (137)
30	ILLUMINA	ss481904841	May 04, 2012 (137)
31	ILLUMINA	ss482863800	Sep 08, 2015 (146)
32	ILLUMINA	ss485730228	May 04, 2012 (137)
33	ILLUMINA	ss537588432	Sep 08, 2015 (146)
34	TISHKOFF	ss563407026	Apr 25, 2013 (138)
35	SSMP	ss658989918	Apr 25, 2013 (138)
36	ILLUMINA	ss778636074	Sep 08, 2015 (146)
37	ILLUMINA	ss783310811	Sep 08, 2015 (146)
38	ILLUMINA	ss784262932	Sep 08, 2015 (146)
39	ILLUMINA	ss832572260	Sep 08, 2015 (146)
40	ILLUMINA	ss834093740	Sep 08, 2015 (146)
41	EVA-GONL	ss989962853	Aug 21, 2014 (142)
42	JMKIDD_LAB	ss1078773085	Aug 21, 2014 (142)
43	1000GENOMES	ss1346651262	Aug 21, 2014 (142)
44	DDI	ss1427055073	Apr 01, 2015 (144)
45	EVA_GENOME_DK	ss1576527579	Apr 01, 2015 (144)
46	EVA_UK10K_ALSPAC	ss1629453201	Apr 01, 2015 (144)
47	EVA_DECODE	ss1642068462	Apr 01, 2015 (144)
48	EVA_UK10K_TWINSUK	ss1672447234	Apr 01, 2015 (144)
49	EVA_SVP	ss1713358353	Apr 01, 2015 (144)
50	ILLUMINA	ss1752046545	Sep 08, 2015 (146)
51	HAMMER_LAB	ss1807421504	Sep 08, 2015 (146)
52	WEILL_CORNELL_DGM	ss1933316340	Feb 12, 2016 (147)
53	GENOMED	ss1967682819	Jul 19, 2016 (147)
54	JJLAB	ss2027415580	Sep 14, 2016 (149)
55	ILLUMINA	ss2094876585	Dec 20, 2016 (150)
56	ILLUMINA	ss2095039290	Dec 20, 2016 (150)
57	USC_VALOUEV	ss2155764512	Dec 20, 2016 (150)
58	HUMAN_LONGEVITY	ss2193214288	Dec 20, 2016 (150)
59	SYSTEMSBIOZJU	ss2628188979	Nov 08, 2017 (151)
60	ILLUMINA	ss2633009073	Nov 08, 2017 (151)
61	GRF	ss2700122175	Nov 08, 2017 (151)
62	GNOMAD	ss2915212740	Nov 08, 2017 (151)
63	SWEGEN	ss3010353173	Nov 08, 2017 (151)
64	BIOINF_KMB_FNS_UNIBA	ss3027517831	Nov 08, 2017 (151)
65	CSHL	ss3350251269	Nov 08, 2017 (151)
66	ILLUMINA	ss3626969751	Oct 12, 2018 (152)
67	ILLUMINA	ss3631015492	Oct 12, 2018 (152)
68	ILLUMINA	ss3633034387	Oct 12, 2018 (152)
69	ILLUMINA	ss3633735902	Oct 12, 2018 (152)
70	ILLUMINA	ss3634523893	Oct 12, 2018 (152)
71	ILLUMINA	ss3635426367	Oct 12, 2018 (152)
72	ILLUMINA	ss3636209810	Oct 12, 2018 (152)
73	ILLUMINA	ss3637177375	Oct 12, 2018 (152)
74	ILLUMINA	ss3637987117	Oct 12, 2018 (152)
75	ILLUMINA	ss3640231226	Oct 12, 2018 (152)
76	ILLUMINA	ss3641035102	Oct 12, 2018 (152)
77	ILLUMINA	ss3641329893	Oct 12, 2018 (152)
78	ILLUMINA	ss3642978706	Oct 12, 2018 (152)
79	ILLUMINA	ss3651848597	Oct 12, 2018 (152)
80	EGCUT_WGS	ss3677653820	Jul 13, 2019 (153)
81	EVA_DECODE	ss3694472271	Jul 13, 2019 (153)
82	ACPOP	ss3739385177	Jul 13, 2019 (153)
83	ILLUMINA	ss3744824708	Jul 13, 2019 (153)
84	EVA	ss3750969384	Jul 13, 2019 (153)
85	ILLUMINA	ss3772323911	Jul 13, 2019 (153)
86	KHV_HUMAN_GENOMES	ss3816301541	Jul 13, 2019 (153)
87	EVA	ss3833328114	Apr 27, 2020 (154)
88	SGDP_PRJ	ss3879119320	Apr 27, 2020 (154)
89	KRGDB	ss3927861388	Apr 27, 2020 (154)
90	KOGIC	ss3972732955	Apr 27, 2020 (154)
91	EVA	ss3984673285	Apr 26, 2021 (155)
92	EVA	ss4017610846	Apr 26, 2021 (155)
93	TOPMED	ss4932877179	Apr 26, 2021 (155)
94	TOMMO_GENOMICS	ss5208177349	Apr 26, 2021 (155)
95	1000G_HIGH_COVERAGE	ss5292244143	Oct 16, 2022 (156)
96	EVA	ss5315649514	Oct 16, 2022 (156)
97	EVA	ss5408246818	Oct 16, 2022 (156)
98	HUGCELL_USP	ss5486846720	Oct 16, 2022 (156)
99	1000G_HIGH_COVERAGE	ss5590475721	Oct 16, 2022 (156)
100	SANFORD_IMAGENETICS	ss5653963264	Oct 16, 2022 (156)
101	TOMMO_GENOMICS	ss5758504102	Oct 16, 2022 (156)
102	EVA	ss5799884094	Oct 16, 2022 (156)
103	YY_MCH	ss5813648331	Oct 16, 2022 (156)
104	EVA	ss5838518537	Oct 16, 2022 (156)
105	EVA	ss5850548362	Oct 16, 2022 (156)
106	EVA	ss5906034777	Oct 16, 2022 (156)
107	EVA	ss5945370366	Oct 16, 2022 (156)
108	1000Genomes	NC_000012.11 - 111807499	Oct 12, 2018 (152)
109	1000Genomes_30x	NC_000012.12 - 111369695	Oct 16, 2022 (156)
110	The Avon Longitudinal Study of Parents and Children	NC_000012.11 - 111807499	Oct 12, 2018 (152)
111	Genetic variation in the Estonian population	NC_000012.11 - 111807499	Oct 12, 2018 (152)
112	The Danish reference pan genome	NC_000012.11 - 111807499	Apr 27, 2020 (154)
113	gnomAD - Genomes	NC_000012.12 - 111369695	Apr 26, 2021 (155)
114	Genome of the Netherlands Release 5	NC_000012.11 - 111807499	Apr 27, 2020 (154)
115	HapMap	NC_000012.12 - 111369695	Apr 27, 2020 (154)
116	KOREAN population from KRGDB	NC_000012.11 - 111807499	Apr 27, 2020 (154)
117	Korean Genome Project	NC_000012.12 - 111369695	Apr 27, 2020 (154)
118	Northern Sweden	NC_000012.11 - 111807499	Jul 13, 2019 (153)
119	CNV burdens in cranial meningiomas	NC_000012.11 - 111807499	Apr 26, 2021 (155)
120	Qatari	NC_000012.11 - 111807499	Apr 27, 2020 (154)
121	SGDP_PRJ	NC_000012.11 - 111807499	Apr 27, 2020 (154)
122	Siberian	NC_000012.11 - 111807499	Apr 27, 2020 (154)
123	8.3KJPN	NC_000012.11 - 111807499	Apr 26, 2021 (155)
124	14KJPN	NC_000012.12 - 111369695	Oct 16, 2022 (156)
125	TopMed	NC_000012.12 - 111369695	Apr 26, 2021 (155)
126	UK 10K study - Twins	NC_000012.11 - 111807499	Oct 12, 2018 (152)
127	A Vietnamese Genetic Variation Database	NC_000012.11 - 111807499	Jul 13, 2019 (153)
128	ALFA	NC_000012.12 - 111369695	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57256728	May 23, 2008 (130)
rs386621919	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss80184478	NC_000012.9:110270218:G:A	NC_000012.12:111369694:G:A	(self)
ss112443835, ss114107067, ss119714996, ss168718332, ss170881451, ss198694696, ss255347105, ss281548736, ss286627365, ss291341049, ss481872055, ss1642068462, ss1713358353, ss2094876585, ss3642978706	NC_000012.10:110291881:G:A	NC_000012.12:111369694:G:A	(self)
59462485, 33024696, 23392068, 3128931, 14731367, 35038782, 12670042, 222781, 15358270, 31136300, 8280866, 66146656, 33024696, 7328056, ss225963142, ss236089909, ss242616696, ss481904841, ss482863800, ss485730228, ss537588432, ss563407026, ss658989918, ss778636074, ss783310811, ss784262932, ss832572260, ss834093740, ss989962853, ss1078773085, ss1346651262, ss1427055073, ss1576527579, ss1629453201, ss1672447234, ss1752046545, ss1807421504, ss1933316340, ss1967682819, ss2027415580, ss2095039290, ss2155764512, ss2628188979, ss2633009073, ss2700122175, ss2915212740, ss3010353173, ss3350251269, ss3626969751, ss3631015492, ss3633034387, ss3633735902, ss3634523893, ss3635426367, ss3636209810, ss3637177375, ss3637987117, ss3640231226, ss3641035102, ss3641329893, ss3651848597, ss3677653820, ss3739385177, ss3744824708, ss3750969384, ss3772323911, ss3833328114, ss3879119320, ss3927861388, ss3984673285, ss4017610846, ss5208177349, ss5315649514, ss5408246818, ss5653963264, ss5799884094, ss5838518537, ss5945370366	NC_000012.11:111807498:G:A	NC_000012.12:111369694:G:A	(self)
78001656, 419422538, 905336, 29110956, 92341206, 148422836, 10578186746, ss2193214288, ss3027517831, ss3694472271, ss3816301541, ss3972732955, ss4932877179, ss5292244143, ss5486846720, ss5590475721, ss5758504102, ss5813648331, ss5850548362, ss5906034777	NC_000012.12:111369694:G:A	NC_000012.12:111369694:G:A	(self)
ss11027922	NT_009775.13:594377:G:A	NC_000012.12:111369694:G:A	(self)
ss19259078	NT_009775.14:2326240:G:A	NC_000012.12:111369694:G:A	(self)
ss1372453, ss23318711, ss40217390, ss65754070, ss74895992, ss105122183, ss119374309, ss157912194, ss160978391, ss161481085, ss174816015, ss410799985	NT_009775.17:2384028:G:A	NC_000012.12:111369694:G:A	(self)
35038782, ss3927861388	NC_000012.11:111807498:G:C	NC_000012.12:111369694:G:C	(self)
35038782, ss3927861388	NC_000012.11:111807498:G:T	NC_000012.12:111369694:G:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs933399

PMID	Title	Author	Year	Journal
15389760	Linkage disequilibrium mapping of bipolar affective disorder at 12q23-q24 provides evidence for association at CUX2 and FLJ32356.	Glaser B et al.	2005	American journal of medical genetics. Part B, Neuropsychiatric genetics

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs933399