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Reference SNP (refSNP) Cluster Report: rs806368                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:86/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitWith1000GenomeData
Citation:PubMedLitVarNEW
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:C/T (FWD)
Allele Origin:
Ancestral Allele:T
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:C=0.2704/1354 (1000 Genomes)
C=0.2071/26007 (TOPMED)
HGVS Names
  • CM000668.2:g.88140381T>C
  • NC_000006.11:g.88850100T>C
  • NC_000006.12:g.88140381T>C
  • NM_001160226.1:c.*3475A>G
  • NM_001160258.1:c.*3475A>G
  • NM_001160259.1:c.*3475A>G
  • NM_016083.4:c.*3475A>G
  • NM_033181.3:c.*3475A>G
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss278911841 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs806368 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss1035732KWOK|OVLP-000804-477851fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct09/02/0010/10/0386Genomic97 %
ss1825533KWOK|OVLP-000925-241207byFreqfwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct10/05/0005/16/0487Genomic97 %
ss2590017SC_JCM|AL136096.7_95806fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct11/03/0010/10/0392Genomicunknown
ss6485786WI_SSAHASNP|NT_007299.11_20325885fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct02/12/0310/10/03111Genomicunknown
ss12824636SC_SNP|NT_007299.12_26670271fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct10/21/0311/17/03119Genomicunknown
ss23980883PERLEGEN|afd4663000byFreqfwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct08/10/0409/13/04123Genomicunknown
ss44725605ABI|hCV8943804byFreqfwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct07/19/0511/03/06126Genomicunknown
ss67867088ILLUMINA|HumanHap550v1.1_rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct11/14/0611/14/06127Genomicunknown
ss68013663ILLUMINA|HumanHap650Yv1.0_rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct11/14/0611/15/06127Genomicunknown
ss68294672ILLUMINA|HumanHap250Sv1.0_rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct12/06/0612/07/06127Genomicunknown
ss68983135PERLEGEN|PGP04663000byFreqfwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct01/30/0708/14/07127Genomicunknown
ss70968147ILLUMINA|HumanHap550v3.0__rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct04/20/0703/31/08130Genomicunknown
ss71578271ILLUMINA|HumanHap650Yv3.0_rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct04/23/0704/23/07127Genomicunknown
ss75547280ILLUMINA|ILMN_Human_1M_rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct08/28/0708/29/07129Genomicunknown
ss76872453CGM_KYOTO|14960fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct09/12/0709/12/07129cDNAunknown
ss76886108SI_EXO|NT_007299.12_26670271byFreqfwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct09/20/0709/05/14129Genomicunknown
ss77151390HGSV|Cor12156_SNV_20070510.chr6_88906819fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct10/09/0710/11/07129Genomicunknown
ss83568422KRIBB_YJKIM|KHS491794fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct12/04/0712/05/07130Genomicunknown
ss93512434BCMHGSC_JDW|JWB-2181061fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct02/26/0803/04/08129Genomicunknown
ss104335259BGI|BGI_rs806368fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct06/08/0806/19/09131Genomicunknown
ss154466662ILLUMINA|Human610_Quadv1_B_rs806368-128_B_F_1502284788fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct06/18/0906/20/09131Genomicunknown
ss157269250GMI|GMI_SNP_44797888fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct06/24/0906/25/09131Genomicunknown
ss159641206ILLUMINA|Human660W-Quad_v1_A_rs806368-128_B_F_1502284788fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct07/06/0907/07/09131Genomicunknown
ss160945675ILLUMINA|HumanOmni1-Quad_v1-0_B_rs806368-128_B_F_1501565922fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct08/04/0910/05/09131Genomicunknown
ss166990848COMPLETE_GENOMICS|NA20431_36_chr6_88906819fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct09/30/0909/30/09132Genomicunknown
ss174699178ILLUMINA|Human1M-Duov3_B_rs806368-128_B_F_1502284788fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct10/01/0910/05/09132Genomicunknown
ss207715703BCM-HGSC-SUB|BCM_CMT_1011-1371164fwd/BC/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct03/15/1003/19/10132Genomicunknown
ss2225265101000GENOMES|pilot_1_YRI_4336193_chr6_88906819fwd/C/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct04/22/1004/22/10132Genomicunknown
ss2335754951000GENOMES|pilot_1_CEU_3180124_chr6_88906819fwd/C/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct05/01/1005/01/10132Genomicunknown
ss2406112961000GENOMES|pilot_1_CHB+JPT_2496373_chr6_88906819fwd/C/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct05/01/1005/01/10132Genomicunknown
ss278911841GMI|GMI_AK_SNP_3232082fwd/C/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct12/16/1012/16/10137Genomicunknown
ss285457431GMI|GMI_NA10851_SNP_1470204fwd/C/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct12/17/1012/17/10138Genomicunknown
ss293658847PJP|SNP_3165205_chr6_88906819fwd/C/Tatgccacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggccactgct01/21/1101/21/11134Genomicunknown
ss481770965ILLUMINA|HumanOmni2.5-4v1_B_rs806368-128_B_F_1617216756fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca01/30/1210/28/16137Genomicunknown
ss481803118ILLUMINA|HumanOmniExpress-12v1_C_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca01/30/1210/27/16137Genomicunknown
ss482765588ILLUMINA|HumanOmni1-Quad_v1-0_C_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca01/30/1208/28/15146Genomicunknown
ss485680183ILLUMINA|HumanOmni2.5-4v1_D_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca01/30/1210/28/16137Genomicunknown
ss537550837ILLUMINA|HumanOmni5-4v1_B_rs806368-131_B_F_1908579042fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca06/22/1208/29/15146Genomicunknown
ss559356416TISHKOFF|snp_chr6_88850100fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca11/22/1211/23/12138Genomicunknown
ss653346915SSMP|6_88850100fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca12/14/1202/11/15138Genomicunknown
ss778996558ILLUMINA|HumanOmni25Exome-8v1_A_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/30/1307/09/15142Genomicunknown
ss783285674ILLUMINA|HumanOmni2.5-4v1_H_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/30/1307/28/15142Genomicunknown
ss784238511ILLUMINA|HumanOmniExpressExome-8v1_A_rs806368-131_B_F_1908579042fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/31/1306/19/15142Genomicunknown
ss832546863ILLUMINA|HumanOmniExpress-12v1_H_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca09/17/1306/19/15144Genomicunknown
ss833152058ILLUMINA|Human660W-Quad_v1_C_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca09/18/1307/02/15142Genomicunknown
ss833742886ILLUMINA|Human660W-Quad_v1_H_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca09/18/1307/02/15142Genomicunknown
ss834458865ILLUMINA|HumanOmni2.5-8v1_A_rs806368-131_B_F_1854755021fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca09/18/1307/28/15142Genomicunknown
ss983206938EVA-GONL|EVA-GONL_rs806368fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca04/23/1404/24/14142Genomicunknown
ss1073813437JMKIDD_LAB|HGDP_WGS_chr6_88850100fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca07/10/1407/11/14142Genomicunknown
ss13211669411000GENOMES|PHASE3_V1_33167311fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca08/16/1408/16/14142Genomicunknown
ss1397462544HAMMER_LAB|HAMMER_LAB_rs806368fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca09/30/1409/30/14146Genomicunknown
ss1430813216DDI|DDI_rs806368fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca11/04/1411/05/14144Genomicunknown
ss1581782371EVA_GENOME_DK|EVA_GENOME_DK_snv_rs806368fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca02/19/1502/20/15144Genomicunknown
ss1592758859EVA_DECODE|EVA_DECODE_6_88906819_722902_rs806368fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca03/02/1503/03/15144Genomicunknown
ss1616103474EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_6_88850100_18375332fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca03/04/1503/04/15144Genomicunknown
ss1659097507EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_6_88850100_18375332fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca03/04/1503/04/15144Genomicunknown
ss1711137519EVA_MGP|EVA_XIMO_253279fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca03/09/1503/09/15144Genomicunknown
ss1712879977EVA_SVP|EVA_SVP_574344fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca03/12/1503/12/15144Genomicunknown
ss1752651332ILLUMINA|OmniExpressExome-8v1-1_B_rs806368-131_B_F_1908579042fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/27/1506/09/15146Genomicunknown
ss1804549134HAMMER_LAB|Hsieh_3559822fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca07/15/1507/15/15146Genomicunknown
ss1926464674WEILL_CORNELL_DGM|SNV:chr6:88850100fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca10/16/1510/17/15147Genomicunknown
ss1958930906ILLUMINA|rs806368-138_B_F_2269491713fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca11/13/1511/13/15147Genomicunknown
ss1970460350GENOMED|rs806368fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca02/16/1602/16/16147Genomicunknown
ss2023875362JJLAB|SNP4377917fwd/BC/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca08/29/1608/30/16149Genomicunknown
ss2152067476USC_VALOUEV|NC_000006.11:g.88850100T>Cfwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca11/17/1611/17/16150Genomicunknown
ss2286015569HUMAN_LONGEVITY|HLI-6-88140381-T-Cfwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca11/18/1611/18/16150Genomicunknown
ss2454655581TOPMED|6_88850100_T/Cfwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca11/20/1611/20/16150Genomicunknown
ss2626433096SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV2802313fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca01/06/1701/06/17151Genomicunknown
ss2634479279ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs806368-131_B_F_190857904fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca02/02/1702/02/17151Genomicunknown
ss2707686326GRF|rs806368fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca02/13/1702/13/17151Genomicunknown
ss2841921741GNOMAD|rs806368fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/18/1705/18/17151Genomicunknown
ss2985374701AFFY|Axiom_PsorMich_Affx-29216449fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/24/1705/24/17151Genomicunknown
ss2986005515AFFY|Axiom_Smokesc1_Affx-29216449fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/24/1705/24/17151Genomicunknown
ss2999504290SWEGEN|NC_000006.11:g.88850100T>Cfwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca05/30/1705/30/17151Genomicunknown
ss3022643750ILLUMINA|MEGA_Consortium_v2_15070954_A2_rs806368-138_B_F_2269491713fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca06/28/1706/28/17151Genomicunknown
ss3025731621BIOINF_KMB_FNS_UNIBA|6.88140381T>Cfwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca07/05/1707/05/17151Genomicunknown
ss3347101336CSHL|rs806368fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca10/02/1710/02/17151Genomicunknown
ss3504452533TOPMED|TOPMed_freeze_5?chr6:88,140,381fwd/C/Tacggcaatgtaaagaaactctcccaccgaaaattactgatttgtaggcca10/05/1710/05/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs806368|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='C/T'|mol=Genomic|build=151
 TAATCTAGAA TTTTTATTTG ATTCCAGGTA ACTTTGGACA ATAGACATGA TGAGATGTTT
 TCTCTTTGAA TAAGTTAACA GTTTAATTAC ATTGAAATAA AATATACTGT GGGCTTAATA
 CATTGTAAAT ATTACAGAAG AAGTACTACT TTGCTATAGT AATTTAATGA CTGAAGCTAC
 ATTTAATAAC AATCTTACCA GTACTTGTAT ACAAAGTATT ATACAGATTA CTAACGAAGA
 TATTGCAGTG GTTGCAACGA TGTTACCAGC TCAACAAACA TCTAACAATA CAATATTCTT
 CTAAGAGGAA AAGTAATAAT GTTAGATTTA CAGACAATAA AGAGTCATGT TTCCCGCTTG
 AAACATTGGA AATAAATTTG AATCCAGATA CAAGAAAAGG TTTCCTTTCT TGGGAACTCT
 GATCCCCAGT AGGCCTAGTA CAGTCAATTT ACATGAAGAT AGCTTTTAAG ATGCCACGGC
 AATGTAAAGA AACTCTCCCA
 Y
 CCGAAAATTA CTGATTTGTA GGCCACTGCT CAAACATCTG ACTTTTTAGA AACCTATTTA
 CATACATTCA GCCCAAATCA GTAGATAGAA TGTTTTTTTC TATATTACAA TAGGCATTGT
 TAACATTTCA TCAGAAGGCC AGTGCAAGAC AATTAATTGT TAATAGCCAT TGCCCAGCAT
 TTAGGAGATT TTAAAATATC ATACAAATAT ACAGTTAGAG TGTGAGAAAT CTAATTGTGT
 GCATGATATG GGTGGTCTCT TTTATGGACA TGAAATGGCA GAAATTAATC AACAGGACAG
 TAACTATAGC GCTACTCATC CAGGGCCTAA TTCTCATCTG GTGGTTGGGC CTATTTCCTG
 CAGAGTGGAT TTAGGCAGCA AAAGGTCCTT GGCATTTAAT ACCAGATAGA CTTAACTCAA
 AGTGCCAGAG AGGCTTGGAA ATCATCTCAA GTGTAGGACA GATGTCTACA GCATCTCTCA
 GATTCATATC CTTTCACATA

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_007299.12 AL121835 AL136096.7
dbSNP Blast Analysis
UniGene Cluster ID
75110

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceC
C/C
C/T
N
T
T/T
HWPC
N
T
ss1321166941EAS 1008AF 0.49309999 0.50690001
EUR 1006AF 0.21870001 0.78130001
AFR 1322AF 0.07640000 0.92359996
AMR 694AF 0.35589999 0.64410001
SAS 978AF 0.29549998 0.70449996
ss166990848PGP 2IG 1.00000000 0.50000000 0.50000000
ss1825533CEPH 184AF 0.27000001 0.73000002
CHMJAsian 74IG0.41891891 0.067567560.51351351 0.418918910.067567560.51351351
ss222526510pilot_1_YRI_low_coverage_panel 118AF 0.08474576 0.91525424
ss233575495pilot_1_CEU_low_coverage_panel 120AF 0.27500001 0.72500002
ss23980883AFD_EUR_PANELEuropean 48IG 0.29166666 0.708333310.751830000.14583333 0.85416669
AFD_AFR_PANELAfrican American 44IG 0.27272728 0.727272750.751830000.13636364 0.86363637
AFD_CHN_PANELAsian 48IG 0.333333340.45833334 0.208333330.751830000.56250000 0.43750000
ss240611296pilot_1_CHB+JPT_low_coverage_panel 120AF 0.44999999 0.55000001
ss68983135HapMap-CEUEuropean 120IG 0.050000000.40000001 0.550000010.654721000.25000000 0.75000000
HapMap-HCBAsian 90IG 0.222222220.53333336 0.244444440.654721000.48888889 0.51111114
HapMap-JPTAsian 90IG 0.244444440.44444445 0.311111120.479500000.46666667 0.53333336
HapMap-YRISub-Saharan African 120IG 0.20000000 0.800000010.751830000.10000000 0.89999998
ss76886108HapMap-CEUEuropean 226IG 0.044247790.40707964 0.548672560.342782000.24778761 0.75221241
HapMap-HCBAsian 86IG 0.209302320.55813956 0.232558150.479500000.48837209 0.51162791
HapMap-JPTAsian 172IG 0.267441870.45348838 0.279069780.402784000.49418604 0.50581396
HapMap-YRISub-Saharan African 226IG 0.14159292 0.858407081.000000000.07079646 0.92920351
HAPMAP-ASW 98IG 0.12244898 0.877551021.000000000.06122449 0.93877554
HAPMAP-CHBAsian 82IG 0.341463420.53658539 0.121951220.438578000.60975611 0.39024389
HAPMAP-CHD 170IG 0.270588250.48235294 0.247058820.751830000.51176471 0.48823529
HAPMAP-GIH 176IG 0.045454550.39772728 0.556818190.479500000.24431819 0.75568181
HAPMAP-LWK 180IG 0.13333334 0.866666671.000000000.06666667 0.93333334
HAPMAP-MEX 100IG 0.100000000.50000000 0.400000010.527089000.34999999 0.64999998
HAPMAP-MKK 286IG 0.006993010.11188811 0.881118890.583882000.06293707 0.93706292
HAPMAP-TSI 176IG 0.022727270.35227272 0.625000000.342782000.19886364 0.80113637

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.395+/-0.2040000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNPNCBI
UNKNOWNUNKNOWNUNKNOWN

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