Name: rs7554444
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs7554444

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:110171287 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.306630 (81162/264690, TOPMED)
T=0.428507 (103991/242682, ALFA)
T=0.20433 (16060/78598, PAGE_STUDY) (+ 16 more)
T=0.28822 (8144/28256, 14KJPN)
T=0.28801 (4827/16760, 8.3KJPN)
T=0.2408 (1542/6404, 1000G_30x)
T=0.2486 (1245/5008, 1000G)
C=0.4893 (2187/4470, Estonian)
T=0.2246 (658/2930, KOREAN)
T=0.2215 (419/1892, HapMap)
T=0.2320 (425/1832, Korea1K)
T=0.159 (123/774, PRJEB37584)
T=0.254 (159/626, Chileans)
C=0.495 (297/600, NorthernSweden)
C=0.340 (83/244, SGDP_PRJ)
T=0.282 (61/216, Qatari)
T=0.210 (45/214, Vietnamese)
T=0.47 (19/40, GENOME_DK)
C=0.36 (13/36, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC6A17 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	242682	C=0.571472	A=0.000021, T=0.428507
European	Sub	213144	C=0.544444	A=0.000023, T=0.455532
African	Sub	6978	C=0.9336	A=0.0000, T=0.0664
African Others	Sub	266	C=0.970	A=0.000, T=0.030
African American	Sub	6712	C=0.9322	A=0.0000, T=0.0678
Asian	Sub	3852	C=0.7801	A=0.0000, T=0.2199
East Asian	Sub	3094	C=0.7702	A=0.0000, T=0.2298
Other Asian	Sub	758	C=0.821	A=0.000, T=0.179
Latin American 1	Sub	1090	C=0.6743	A=0.0000, T=0.3257
Latin American 2	Sub	8482	C=0.7627	A=0.0000, T=0.2373
South Asian	Sub	330	C=0.691	A=0.000, T=0.309
Other	Sub	8806	C=0.6460	A=0.0000, T=0.3540

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.693370	T=0.306630
Allele Frequency Aggregator	Total	Global	242682	C=0.571472	A=0.000021, T=0.428507
Allele Frequency Aggregator	European	Sub	213144	C=0.544444	A=0.000023, T=0.455532
Allele Frequency Aggregator	Other	Sub	8806	C=0.6460	A=0.0000, T=0.3540
Allele Frequency Aggregator	Latin American 2	Sub	8482	C=0.7627	A=0.0000, T=0.2373
Allele Frequency Aggregator	African	Sub	6978	C=0.9336	A=0.0000, T=0.0664
Allele Frequency Aggregator	Asian	Sub	3852	C=0.7801	A=0.0000, T=0.2199
Allele Frequency Aggregator	Latin American 1	Sub	1090	C=0.6743	A=0.0000, T=0.3257
Allele Frequency Aggregator	South Asian	Sub	330	C=0.691	A=0.000, T=0.309
The PAGE Study	Global	Study-wide	78598	C=0.79567	T=0.20433
The PAGE Study	AfricanAmerican	Sub	32480	C=0.89353	T=0.10647
The PAGE Study	Mexican	Sub	10784	C=0.76660	T=0.23340
The PAGE Study	Asian	Sub	8316	C=0.7316	T=0.2684
The PAGE Study	PuertoRican	Sub	7912	C=0.6816	T=0.3184
The PAGE Study	NativeHawaiian	Sub	4528	C=0.7111	T=0.2889
The PAGE Study	Cuban	Sub	4222	C=0.6490	T=0.3510
The PAGE Study	Dominican	Sub	3826	C=0.7533	T=0.2467
The PAGE Study	CentralAmerican	Sub	2440	C=0.8160	T=0.1840
The PAGE Study	SouthAmerican	Sub	1978	C=0.7821	T=0.2179
The PAGE Study	NativeAmerican	Sub	1258	C=0.6653	T=0.3347
The PAGE Study	SouthAsian	Sub	854	C=0.650	T=0.350
14KJPN	JAPANESE	Study-wide	28256	C=0.71178	T=0.28822
8.3KJPN	JAPANESE	Study-wide	16760	C=0.71199	T=0.28801
1000Genomes_30x	Global	Study-wide	6404	C=0.7592	T=0.2408
1000Genomes_30x	African	Sub	1786	C=0.9709	T=0.0291
1000Genomes_30x	Europe	Sub	1266	C=0.5419	T=0.4581
1000Genomes_30x	South Asian	Sub	1202	C=0.6589	T=0.3411
1000Genomes_30x	East Asian	Sub	1170	C=0.7897	T=0.2103
1000Genomes_30x	American	Sub	980	C=0.741	T=0.259
1000Genomes	Global	Study-wide	5008	C=0.7514	T=0.2486
1000Genomes	African	Sub	1322	C=0.9682	T=0.0318
1000Genomes	East Asian	Sub	1008	C=0.7867	T=0.2133
1000Genomes	Europe	Sub	1006	C=0.5348	T=0.4652
1000Genomes	South Asian	Sub	978	C=0.652	T=0.348
1000Genomes	American	Sub	694	C=0.741	T=0.259
Genetic variation in the Estonian population	Estonian	Study-wide	4470	C=0.4893	T=0.5107
KOREAN population from KRGDB	KOREAN	Study-wide	2930	C=0.7754	T=0.2246
HapMap	Global	Study-wide	1892	C=0.7785	T=0.2215
HapMap	American	Sub	770	C=0.660	T=0.340
HapMap	African	Sub	692	C=0.983	T=0.017
HapMap	Asian	Sub	254	C=0.744	T=0.256
HapMap	Europe	Sub	176	C=0.545	T=0.455
Korean Genome Project	KOREAN	Study-wide	1832	C=0.7680	T=0.2320
CNV burdens in cranial meningiomas	Global	Study-wide	774	C=0.841	T=0.159
CNV burdens in cranial meningiomas	CRM	Sub	774	C=0.841	T=0.159
Chileans	Chilean	Study-wide	626	C=0.746	T=0.254
Northern Sweden	ACPOP	Study-wide	600	C=0.495	T=0.505
SGDP_PRJ	Global	Study-wide	244	C=0.340	T=0.660
Qatari	Global	Study-wide	216	C=0.718	T=0.282
A Vietnamese Genetic Variation Database	Global	Study-wide	214	C=0.790	T=0.210
The Danish reference pan genome	Danish	Study-wide	40	C=0.53	T=0.47
Siberian	Global	Study-wide	36	C=0.36	T=0.64

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.110171287C>A
GRCh38.p14 chr 1	NC_000001.11:g.110171287C>T
GRCh37.p13 chr 1	NC_000001.10:g.110713909C>A
GRCh37.p13 chr 1	NC_000001.10:g.110713909C>T
SLC6A17 RefSeqGene	NG_051945.1:g.25774C>A
SLC6A17 RefSeqGene	NG_051945.1:g.25774C>T

Gene: SLC6A17, solute carrier family 6 member 17 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC6A17 transcript	NM_001010898.4:c.287-773C… NM_001010898.4:c.287-773C>A	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	T
GRCh38.p14 chr 1	NC_000001.11:g.110171287=	NC_000001.11:g.110171287C>A	NC_000001.11:g.110171287C>T
GRCh37.p13 chr 1	NC_000001.10:g.110713909=	NC_000001.10:g.110713909C>A	NC_000001.10:g.110713909C>T
SLC6A17 RefSeqGene	NG_051945.1:g.25774=	NG_051945.1:g.25774C>A	NG_051945.1:g.25774C>T
SLC6A17 transcript	NM_001010898.2:c.287-773=	NM_001010898.2:c.287-773C>A	NM_001010898.2:c.287-773C>T
SLC6A17 transcript	NM_001010898.4:c.287-773=	NM_001010898.4:c.287-773C>A	NM_001010898.4:c.287-773C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

109 SubSNP, 25 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WI_SSAHASNP	ss11427799	Jul 11, 2003 (116)
2	SSAHASNP	ss20613000	Apr 05, 2004 (121)
3	PERLEGEN	ss24278776	Sep 20, 2004 (123)
4	AFFY	ss76655241	Dec 06, 2007 (129)
5	BCMHGSC_JDW	ss87710484	Mar 23, 2008 (129)
6	HUMANGENOME_JCVI	ss99239666	Feb 05, 2009 (130)
7	KRIBB_YJKIM	ss104956968	Feb 05, 2009 (130)
8	1000GENOMES	ss108516944	Jan 23, 2009 (130)
9	ENSEMBL	ss139278949	Dec 01, 2009 (131)
10	ILLUMINA	ss160887874	Dec 01, 2009 (131)
11	COMPLETE_GENOMICS	ss166988450	Jul 04, 2010 (132)
12	BCM-HGSC-SUB	ss205385367	Jul 04, 2010 (132)
13	1000GENOMES	ss218592422	Jul 14, 2010 (132)
14	1000GENOMES	ss230688516	Jul 14, 2010 (132)
15	1000GENOMES	ss238347187	Jul 15, 2010 (132)
16	BL	ss253377134	May 09, 2011 (134)
17	GMI	ss275975205	May 04, 2012 (137)
18	PJP	ss290596860	May 09, 2011 (134)
19	ILLUMINA	ss481592621	May 04, 2012 (137)
20	ILLUMINA	ss481622607	May 04, 2012 (137)
21	ILLUMINA	ss482592437	Sep 08, 2015 (146)
22	ILLUMINA	ss485591253	May 04, 2012 (137)
23	ILLUMINA	ss537481746	Sep 08, 2015 (146)
24	SSMP	ss648307913	Apr 25, 2013 (138)
25	ILLUMINA	ss778606070	Sep 08, 2015 (146)
26	ILLUMINA	ss783241222	Sep 08, 2015 (146)
27	ILLUMINA	ss784195038	Sep 08, 2015 (146)
28	ILLUMINA	ss832501801	Sep 08, 2015 (146)
29	ILLUMINA	ss834063422	Sep 08, 2015 (146)
30	JMKIDD_LAB	ss1068187040	Aug 21, 2014 (142)
31	1000GENOMES	ss1292402727	Aug 21, 2014 (142)
32	DDI	ss1425934713	Apr 01, 2015 (144)
33	EVA_GENOME_DK	ss1574317641	Apr 01, 2015 (144)
34	EVA_DECODE	ss1584942239	Apr 01, 2015 (144)
35	EVA_UK10K_ALSPAC	ss1600973399	Apr 01, 2015 (144)
36	EVA_UK10K_ALSPAC	ss1600973400	Apr 01, 2015 (144)
37	EVA_UK10K_TWINSUK	ss1643967432	Apr 01, 2015 (144)
38	EVA_UK10K_TWINSUK	ss1643967433	Apr 01, 2015 (144)
39	EVA_SVP	ss1712362259	Apr 01, 2015 (144)
40	ILLUMINA	ss1751862796	Sep 08, 2015 (146)
41	WEILL_CORNELL_DGM	ss1918762548	Feb 12, 2016 (147)
42	ILLUMINA	ss1946004647	Feb 12, 2016 (147)
43	ILLUMINA	ss1958302299	Feb 12, 2016 (147)
44	GENOMED	ss1966839695	Jul 19, 2016 (147)
45	JJLAB	ss2019905684	Sep 14, 2016 (149)
46	USC_VALOUEV	ss2147923587	Dec 20, 2016 (150)
47	HUMAN_LONGEVITY	ss2165650220	Dec 20, 2016 (150)
48	SYSTEMSBIOZJU	ss2624462184	Nov 08, 2017 (151)
49	ILLUMINA	ss2632561952	Nov 08, 2017 (151)
50	GRF	ss2697853343	Nov 08, 2017 (151)
51	ILLUMINA	ss2710679688	Nov 08, 2017 (151)
52	GNOMAD	ss2759475580	Nov 08, 2017 (151)
53	SWEGEN	ss2987426595	Nov 08, 2017 (151)
54	SWEGEN	ss2987426596	Nov 08, 2017 (151)
55	ILLUMINA	ss3021120085	Nov 08, 2017 (151)
56	BIOINF_KMB_FNS_UNIBA	ss3023716628	Nov 08, 2017 (151)
57	CSHL	ss3343631394	Nov 08, 2017 (151)
58	ILLUMINA	ss3625547424	Oct 11, 2018 (152)
59	ILLUMINA	ss3626180746	Oct 11, 2018 (152)
60	ILLUMINA	ss3630595683	Oct 11, 2018 (152)
61	ILLUMINA	ss3632905669	Oct 11, 2018 (152)
62	ILLUMINA	ss3633600776	Oct 11, 2018 (152)
63	ILLUMINA	ss3634342486	Oct 11, 2018 (152)
64	ILLUMINA	ss3635294338	Oct 11, 2018 (152)
65	ILLUMINA	ss3636020364	Oct 11, 2018 (152)
66	ILLUMINA	ss3637044802	Oct 11, 2018 (152)
67	ILLUMINA	ss3640049845	Oct 11, 2018 (152)
68	ILLUMINA	ss3644500615	Oct 11, 2018 (152)
69	URBANLAB	ss3646750506	Oct 11, 2018 (152)
70	ILLUMINA	ss3651452037	Oct 11, 2018 (152)
71	EGCUT_WGS	ss3655514705	Jul 12, 2019 (153)
72	EVA_DECODE	ss3687515655	Jul 12, 2019 (153)
73	EVA_DECODE	ss3687515656	Jul 12, 2019 (153)
74	ILLUMINA	ss3725053821	Jul 12, 2019 (153)
75	ACPOP	ss3727382455	Jul 12, 2019 (153)
76	ILLUMINA	ss3744052043	Jul 12, 2019 (153)
77	ILLUMINA	ss3744643441	Jul 12, 2019 (153)
78	EVA	ss3746663107	Jul 12, 2019 (153)
79	PAGE_CC	ss3770832309	Jul 12, 2019 (153)
80	ILLUMINA	ss3772144660	Jul 12, 2019 (153)
81	PACBIO	ss3783517215	Jul 12, 2019 (153)
82	PACBIO	ss3789159341	Jul 12, 2019 (153)
83	PACBIO	ss3794032253	Jul 12, 2019 (153)
84	KHV_HUMAN_GENOMES	ss3799666774	Jul 12, 2019 (153)
85	EVA	ss3826365273	Apr 25, 2020 (154)
86	EVA	ss3836574069	Apr 25, 2020 (154)
87	EVA	ss3841982382	Apr 25, 2020 (154)
88	SGDP_PRJ	ss3849634867	Apr 25, 2020 (154)
89	KRGDB	ss3894726283	Apr 25, 2020 (154)
90	KOGIC	ss3945232105	Apr 25, 2020 (154)
91	EVA	ss3984462785	Apr 25, 2021 (155)
92	TOPMED	ss4463342135	Apr 25, 2021 (155)
93	TOMMO_GENOMICS	ss5145648050	Apr 25, 2021 (155)
94	1000G_HIGH_COVERAGE	ss5243584165	Oct 12, 2022 (156)
95	EVA	ss5314643058	Oct 12, 2022 (156)
96	EVA	ss5321138066	Oct 12, 2022 (156)
97	HUGCELL_USP	ss5444510424	Oct 12, 2022 (156)
98	EVA	ss5505994336	Oct 12, 2022 (156)
99	1000G_HIGH_COVERAGE	ss5516565051	Oct 12, 2022 (156)
100	SANFORD_IMAGENETICS	ss5626284002	Oct 12, 2022 (156)
101	TOMMO_GENOMICS	ss5670906280	Oct 12, 2022 (156)
102	EVA	ss5799495498	Oct 12, 2022 (156)
103	YY_MCH	ss5800925351	Oct 12, 2022 (156)
104	EVA	ss5832473687	Oct 12, 2022 (156)
105	EVA	ss5832473688	Oct 12, 2022 (156)
106	EVA	ss5847550813	Oct 12, 2022 (156)
107	EVA	ss5849064615	Oct 12, 2022 (156)
108	EVA	ss5909770614	Oct 12, 2022 (156)
109	EVA	ss5938148878	Oct 12, 2022 (156)
110	1000Genomes	NC_000001.10 - 110713909	Oct 11, 2018 (152)
111	1000Genomes_30x	NC_000001.11 - 110171287	Oct 12, 2022 (156)
112	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 1755662 (NC_000001.10:110713908:C:C 2100/3854, NC_000001.10:110713908:C:T 1754/3854) Row 1755663 (NC_000001.10:110713908:C:C 3843/3854, NC_000001.10:110713908:C:A 11/3854)	-	Oct 11, 2018 (152)
113	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 1755662 (NC_000001.10:110713908:C:C 2100/3854, NC_000001.10:110713908:C:T 1754/3854) Row 1755663 (NC_000001.10:110713908:C:C 3843/3854, NC_000001.10:110713908:C:A 11/3854)	-	Oct 11, 2018 (152)
114	Chileans	NC_000001.10 - 110713909	Apr 25, 2020 (154)
115	Genetic variation in the Estonian population	NC_000001.10 - 110713909	Oct 11, 2018 (152)
116	The Danish reference pan genome	NC_000001.10 - 110713909	Apr 25, 2020 (154)
117	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22478673 (NC_000001.11:110171286:C:A 134/140048) Row 22478674 (NC_000001.11:110171286:C:T 46834/140004)	-	Apr 25, 2021 (155)
118	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22478673 (NC_000001.11:110171286:C:A 134/140048) Row 22478674 (NC_000001.11:110171286:C:T 46834/140004)	-	Apr 25, 2021 (155)
119	HapMap	NC_000001.11 - 110171287	Apr 25, 2020 (154)
120	KOREAN population from KRGDB	NC_000001.10 - 110713909	Apr 25, 2020 (154)
121	Korean Genome Project	NC_000001.11 - 110171287	Apr 25, 2020 (154)
122	Northern Sweden	NC_000001.10 - 110713909	Jul 12, 2019 (153)
123	The PAGE Study	NC_000001.11 - 110171287	Jul 12, 2019 (153)
124	CNV burdens in cranial meningiomas	NC_000001.10 - 110713909	Apr 25, 2021 (155)
125	Qatari	NC_000001.10 - 110713909	Apr 25, 2020 (154)
126	SGDP_PRJ	NC_000001.10 - 110713909	Apr 25, 2020 (154)
127	Siberian	NC_000001.10 - 110713909	Apr 25, 2020 (154)
128	8.3KJPN	NC_000001.10 - 110713909	Apr 25, 2021 (155)
129	14KJPN	NC_000001.11 - 110171287	Oct 12, 2022 (156)
130	TopMed	NC_000001.11 - 110171287	Apr 25, 2021 (155)
131	UK 10K study - Twins Submission ignored due to conflicting rows: Row 1755662 (NC_000001.10:110713908:C:C 2044/3708, NC_000001.10:110713908:C:T 1664/3708) Row 1755663 (NC_000001.10:110713908:C:C 3700/3708, NC_000001.10:110713908:C:A 8/3708)	-	Oct 11, 2018 (152)
132	UK 10K study - Twins Submission ignored due to conflicting rows: Row 1755662 (NC_000001.10:110713908:C:C 2044/3708, NC_000001.10:110713908:C:T 1664/3708) Row 1755663 (NC_000001.10:110713908:C:C 3700/3708, NC_000001.10:110713908:C:A 8/3708)	-	Oct 11, 2018 (152)
133	A Vietnamese Genetic Variation Database	NC_000001.10 - 110713909	Jul 12, 2019 (153)
134	ALFA	NC_000001.11 - 110171287	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17671030	Oct 07, 2004 (123)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss1600973400, ss1643967433, ss2759475580, ss2987426596, ss5832473688	NC_000001.10:110713908:C:A	NC_000001.11:110171286:C:A	(self)
4978771796, ss2165650220, ss3687515655	NC_000001.11:110171286:C:A	NC_000001.11:110171286:C:A	(self)
ss76655241, ss87710484, ss108516944, ss166988450, ss205385367, ss253377134, ss275975205, ss290596860, ss481592621, ss1584942239, ss1712362259	NC_000001.9:110515431:C:T	NC_000001.11:110171286:C:T	(self)
3177621, 18253, 1252953, 1661428, 1903677, 667320, 12097, 804478, 1651847, 439941, 3617357, 380516, ss218592422, ss230688516, ss238347187, ss481622607, ss482592437, ss485591253, ss537481746, ss648307913, ss778606070, ss783241222, ss784195038, ss832501801, ss834063422, ss1068187040, ss1292402727, ss1425934713, ss1574317641, ss1600973399, ss1643967432, ss1751862796, ss1918762548, ss1946004647, ss1958302299, ss1966839695, ss2019905684, ss2147923587, ss2624462184, ss2632561952, ss2697853343, ss2710679688, ss2759475580, ss2987426595, ss3021120085, ss3343631394, ss3625547424, ss3626180746, ss3630595683, ss3632905669, ss3633600776, ss3634342486, ss3635294338, ss3636020364, ss3637044802, ss3640049845, ss3644500615, ss3651452037, ss3655514705, ss3727382455, ss3744052043, ss3744643441, ss3746663107, ss3772144660, ss3783517215, ss3789159341, ss3794032253, ss3826365273, ss3836574069, ss3849634867, ss3894726283, ss3984462785, ss5145648050, ss5314643058, ss5321138066, ss5505994336, ss5626284002, ss5799495498, ss5832473687, ss5847550813, ss5938148878	NC_000001.10:110713908:C:T	NC_000001.11:110171286:C:T	(self)
4090986, 152745, 1610106, 53778, 4743384, 26948470, 4978771796, ss2165650220, ss3023716628, ss3646750506, ss3687515656, ss3725053821, ss3770832309, ss3799666774, ss3841982382, ss3945232105, ss4463342135, ss5243584165, ss5444510424, ss5516565051, ss5670906280, ss5800925351, ss5849064615, ss5909770614	NC_000001.11:110171286:C:T	NC_000001.11:110171286:C:T	(self)
ss11427799	NT_019273.15:1151722:C:T	NC_000001.11:110171286:C:T	(self)
ss20613000	NT_019273.16:1709856:C:T	NC_000001.11:110171286:C:T	(self)
ss24278776, ss99239666, ss104956968, ss139278949, ss160887874	NT_032977.9:80685826:C:T	NC_000001.11:110171286:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs7554444

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs7554444