Name: rs642112
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs642112

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:41987646 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>G / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.207333 (54879/264690, TOPMED)
C=0.03751 (1060/28258, 14KJPN)
C=0.03729 (625/16760, 8.3KJPN) (+ 12 more)
C=0.30525 (3765/12334, ALFA)
C=0.1587 (1016/6404, 1000G_30x)
C=0.1534 (768/5008, 1000G)
C=0.2897 (1255/4332, Estonian)
C=0.0597 (175/2930, KOREAN)
C=0.0519 (95/1832, Korea1K)
C=0.1048 (176/1680, HapMap)
C=0.138 (74/536, SGDP_PRJ)
C=0.301 (65/216, Qatari)
C=0.032 (7/216, Vietnamese)
C=0.24 (13/54, Siberian)
C=0.33 (13/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: HIVEP3 : Intron Variant
LOC124904160 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	12334	C=0.30525	G=0.00632, T=0.68842
European	Sub	8408	C=0.3214	G=0.0093, T=0.6694
African	Sub	782	C=0.111	G=0.000, T=0.889
African Others	Sub	18	C=0.06	G=0.00, T=0.94
African American	Sub	764	C=0.113	G=0.000, T=0.887
Asian	Sub	52	C=0.02	G=0.00, T=0.98
East Asian	Sub	18	C=0.00	G=0.00, T=1.00
Other Asian	Sub	34	C=0.03	G=0.00, T=0.97
Latin American 1	Sub	154	C=0.305	G=0.000, T=0.695
Latin American 2	Sub	2208	C=0.3225	G=0.0000, T=0.6775
South Asian	Sub	20	C=0.50	G=0.00, T=0.50
Other	Sub	710	C=0.290	G=0.000, T=0.710

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.207333	T=0.792667
14KJPN	JAPANESE	Study-wide	28258	C=0.03751	T=0.96249
8.3KJPN	JAPANESE	Study-wide	16760	C=0.03729	T=0.96271
Allele Frequency Aggregator	Total	Global	12334	C=0.30525	G=0.00632, T=0.68842
Allele Frequency Aggregator	European	Sub	8408	C=0.3214	G=0.0093, T=0.6694
Allele Frequency Aggregator	Latin American 2	Sub	2208	C=0.3225	G=0.0000, T=0.6775
Allele Frequency Aggregator	African	Sub	782	C=0.111	G=0.000, T=0.889
Allele Frequency Aggregator	Other	Sub	710	C=0.290	G=0.000, T=0.710
Allele Frequency Aggregator	Latin American 1	Sub	154	C=0.305	G=0.000, T=0.695
Allele Frequency Aggregator	Asian	Sub	52	C=0.02	G=0.00, T=0.98
Allele Frequency Aggregator	South Asian	Sub	20	C=0.50	G=0.00, T=0.50
1000Genomes_30x	Global	Study-wide	6404	C=0.1587	G=0.0089, T=0.8324
1000Genomes_30x	African	Sub	1786	C=0.0610	G=0.0000, T=0.9390
1000Genomes_30x	Europe	Sub	1266	C=0.2725	G=0.0292, T=0.6983
1000Genomes_30x	South Asian	Sub	1202	C=0.1597	G=0.0050, T=0.8353
1000Genomes_30x	East Asian	Sub	1170	C=0.0325	G=0.0000, T=0.9675
1000Genomes_30x	American	Sub	980	C=0.339	G=0.014, T=0.647
1000Genomes	Global	Study-wide	5008	C=0.1534	G=0.0048, T=0.8419
1000Genomes	African	Sub	1322	C=0.0590	G=0.0000, T=0.9410
1000Genomes	East Asian	Sub	1008	C=0.0308	G=0.0000, T=0.9692
1000Genomes	Europe	Sub	1006	C=0.2734	G=0.0159, T=0.7107
1000Genomes	South Asian	Sub	978	C=0.150	G=0.003, T=0.847
1000Genomes	American	Sub	694	C=0.341	G=0.007, T=0.651
Genetic variation in the Estonian population	Estonian	Study-wide	4332	C=0.2897	T=0.7103
KOREAN population from KRGDB	KOREAN	Study-wide	2930	C=0.0597	T=0.9403
Korean Genome Project	KOREAN	Study-wide	1832	C=0.0519	T=0.9481
HapMap	Global	Study-wide	1680	C=0.1048	T=0.8952
HapMap	African	Sub	692	C=0.065	T=0.935
HapMap	American	Sub	558	C=0.122	T=0.878
HapMap	Asian	Sub	254	C=0.028	T=0.972
HapMap	Europe	Sub	176	C=0.318	T=0.682
SGDP_PRJ	Global	Study-wide	536	C=0.138	G=0.019, T=0.843
Qatari	Global	Study-wide	216	C=0.301	T=0.699
A Vietnamese Genetic Variation Database	Global	Study-wide	216	C=0.032	T=0.968
Siberian	Global	Study-wide	54	C=0.24	T=0.76
The Danish reference pan genome	Danish	Study-wide	40	C=0.33	T=0.68

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.41987646C>G
GRCh38.p14 chr 1	NC_000001.11:g.41987646C>T
GRCh37.p13 chr 1	NC_000001.10:g.42453317C>G
GRCh37.p13 chr 1	NC_000001.10:g.42453317C>T
HIVEP3 RefSeqGene	NG_030026.2:g.53280G>C
HIVEP3 RefSeqGene	NG_030026.2:g.53280G>A

Gene: HIVEP3, HIVEP zinc finger 3 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
HIVEP3 transcript variant 2	NM_001127714.3:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant 1	NM_024503.5:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant 4	NR_038261.2:n.	N/A	Intron Variant
HIVEP3 transcript variant 3	NR_038260.2:n.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X2	XM_011541885.4:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X3	XM_011541886.4:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X5	XM_011541887.4:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X1	XM_047426875.1:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X4	XM_047426877.1:c.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X6	XR_007062478.1:n.	N/A	Genic Upstream Transcript Variant
HIVEP3 transcript variant X7	XR_007062479.1:n.	N/A	Genic Upstream Transcript Variant

Gene: LOC124904160, uncharacterized LOC124904160 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124904160 transcript variant X1	XR_007066031.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	G	T
GRCh38.p14 chr 1	NC_000001.11:g.41987646=	NC_000001.11:g.41987646C>G	NC_000001.11:g.41987646C>T
GRCh37.p13 chr 1	NC_000001.10:g.42453317=	NC_000001.10:g.42453317C>G	NC_000001.10:g.42453317C>T
HIVEP3 RefSeqGene	NG_030026.2:g.53280=	NG_030026.2:g.53280G>C	NG_030026.2:g.53280G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

92 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss814919	Aug 11, 2000 (83)
2	KWOK	ss933618	Oct 04, 2000 (86)
3	KWOK	ss1916897	Oct 18, 2000 (87)
4	BCM_SSAHASNP	ss9816715	Jul 11, 2003 (116)
5	WI_SSAHASNP	ss11349109	Jul 11, 2003 (116)
6	SSAHASNP	ss20590300	Apr 05, 2004 (121)
7	PERLEGEN	ss24607424	Sep 20, 2004 (123)
8	ABI	ss41085860	Mar 14, 2006 (126)
9	AFFY	ss66366804	Nov 29, 2006 (127)
10	AFFY	ss76090248	Dec 06, 2007 (129)
11	HGSV	ss77111677	Dec 06, 2007 (129)
12	HGSV	ss78019823	Dec 06, 2007 (129)
13	HGSV	ss81079258	Dec 14, 2007 (130)
14	KRIBB_YJKIM	ss81430642	Dec 16, 2007 (130)
15	HGSV	ss81516105	Dec 14, 2007 (130)
16	HGSV	ss84099895	Dec 14, 2007 (130)
17	HUMANGENOME_JCVI	ss99203152	Feb 04, 2009 (130)
18	BGI	ss106562319	Feb 04, 2009 (130)
19	1000GENOMES	ss108151011	Jan 23, 2009 (130)
20	1000GENOMES	ss110346646	Jan 24, 2009 (130)
21	ILLUMINA-UK	ss118645376	Dec 01, 2009 (131)
22	GMI	ss154918562	Dec 01, 2009 (131)
23	COMPLETE_GENOMICS	ss163312828	Jul 04, 2010 (132)
24	COMPLETE_GENOMICS	ss164166423	Jul 04, 2010 (132)
25	AFFY	ss172468108	Jun 24, 2010 (142)
26	BUSHMAN	ss198354101	Jul 04, 2010 (132)
27	BCM-HGSC-SUB	ss205118317	Jul 04, 2010 (132)
28	1000GENOMES	ss218344897	Jul 14, 2010 (132)
29	1000GENOMES	ss230506166	Jul 14, 2010 (132)
30	1000GENOMES	ss238206040	Jul 15, 2010 (132)
31	BL	ss253053545	May 09, 2011 (134)
32	GMI	ss275797788	May 04, 2012 (137)
33	PJP	ss290812593	May 09, 2011 (134)
34	TISHKOFF	ss554027369	Apr 25, 2013 (138)
35	SSMP	ss647816829	Apr 25, 2013 (138)
36	JMKIDD_LAB	ss1067824602	Aug 21, 2014 (142)
37	1000GENOMES	ss1290548462	Aug 21, 2014 (142)
38	1000GENOMES	ss1290548463	Aug 21, 2014 (142)
39	DDI	ss1425783650	Apr 01, 2015 (144)
40	EVA_GENOME_DK	ss1574012789	Apr 01, 2015 (144)
41	EVA_DECODE	ss1584439041	Apr 01, 2015 (144)
42	EVA_DECODE	ss1584439042	Apr 01, 2015 (144)
43	EVA_UK10K_ALSPAC	ss1599996035	Apr 01, 2015 (144)
44	EVA_UK10K_ALSPAC	ss1599996036	Apr 01, 2015 (144)
45	EVA_UK10K_TWINSUK	ss1642990068	Apr 01, 2015 (144)
46	EVA_UK10K_TWINSUK	ss1642990069	Apr 01, 2015 (144)
47	EVA_SVP	ss1712327028	Apr 01, 2015 (144)
48	HAMMER_LAB	ss1794236369	Sep 08, 2015 (146)
49	WEILL_CORNELL_DGM	ss1918284626	Feb 12, 2016 (147)
50	GENOMED	ss1966729473	Jul 19, 2016 (147)
51	USC_VALOUEV	ss2147668567	Dec 20, 2016 (150)
52	HUMAN_LONGEVITY	ss2161788287	Dec 20, 2016 (150)
53	SYSTEMSBIOZJU	ss2624343903	Nov 08, 2017 (151)
54	GRF	ss2697577461	Nov 08, 2017 (151)
55	GNOMAD	ss2754152806	Nov 08, 2017 (151)
56	AFFY	ss2985506631	Nov 08, 2017 (151)
57	SWEGEN	ss2986676938	Nov 08, 2017 (151)
58	SWEGEN	ss2986676939	Nov 08, 2017 (151)
59	BIOINF_KMB_FNS_UNIBA	ss3023591533	Nov 08, 2017 (151)
60	ILLUMINA	ss3640979025	Oct 11, 2018 (152)
61	ILLUMINA	ss3641272939	Oct 11, 2018 (152)
62	URBANLAB	ss3646647805	Oct 11, 2018 (152)
63	EGCUT_WGS	ss3654742403	Jul 12, 2019 (153)
64	EVA_DECODE	ss3686604510	Jul 12, 2019 (153)
65	EVA_DECODE	ss3686604511	Jul 12, 2019 (153)
66	ACPOP	ss3726976064	Jul 12, 2019 (153)
67	ACPOP	ss3726976065	Jul 12, 2019 (153)
68	EVA	ss3746097911	Jul 12, 2019 (153)
69	PACBIO	ss3783387955	Jul 12, 2019 (153)
70	PACBIO	ss3789050661	Jul 12, 2019 (153)
71	PACBIO	ss3793923336	Jul 12, 2019 (153)
72	KHV_HUMAN_GENOMES	ss3799111568	Jul 12, 2019 (153)
73	EVA	ss3826132380	Apr 25, 2020 (154)
74	EVA	ss3836453704	Apr 25, 2020 (154)
75	EVA	ss3841859280	Apr 25, 2020 (154)
76	SGDP_PRJ	ss3848672236	Apr 25, 2020 (154)
77	KRGDB	ss3893645632	Apr 25, 2020 (154)
78	KOGIC	ss3944325847	Apr 25, 2020 (154)
79	TOPMED	ss4446631898	Apr 25, 2021 (155)
80	TOMMO_GENOMICS	ss5143543489	Apr 25, 2021 (155)
81	1000G_HIGH_COVERAGE	ss5241968554	Oct 13, 2022 (156)
82	1000G_HIGH_COVERAGE	ss5241968555	Oct 13, 2022 (156)
83	HUGCELL_USP	ss5443065805	Oct 13, 2022 (156)
84	HUGCELL_USP	ss5443065806	Oct 13, 2022 (156)
85	1000G_HIGH_COVERAGE	ss5514093721	Oct 13, 2022 (156)
86	SANFORD_IMAGENETICS	ss5625362755	Oct 13, 2022 (156)
87	TOMMO_GENOMICS	ss5668187071	Oct 13, 2022 (156)
88	YY_MCH	ss5800521957	Oct 13, 2022 (156)
89	EVA	ss5831845289	Oct 13, 2022 (156)
90	EVA	ss5831845290	Oct 13, 2022 (156)
91	EVA	ss5848873865	Oct 13, 2022 (156)
92	EVA	ss5937186394	Oct 13, 2022 (156)
93	1000Genomes	NC_000001.10 - 42453317	Oct 11, 2018 (152)
94	1000Genomes_30x	NC_000001.11 - 41987646	Oct 13, 2022 (156)
95	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 680580 (NC_000001.10:42453316:C:C 1111/3854, NC_000001.10:42453316:C:T 2743/3854) Row 680581 (NC_000001.10:42453316:C:C 3734/3854, NC_000001.10:42453316:C:G 120/3854)	-	Oct 11, 2018 (152)
96	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 680580 (NC_000001.10:42453316:C:C 1111/3854, NC_000001.10:42453316:C:T 2743/3854) Row 680581 (NC_000001.10:42453316:C:C 3734/3854, NC_000001.10:42453316:C:G 120/3854)	-	Oct 11, 2018 (152)
97	Genetic variation in the Estonian population	NC_000001.10 - 42453317	Oct 11, 2018 (152)
98	The Danish reference pan genome	NC_000001.10 - 42453317	Apr 25, 2020 (154)
99	gnomAD - Genomes Submission ignored due to conflicting rows: Row 8834893 (NC_000001.11:41987645:C:G 2809/140160) Row 8834894 (NC_000001.11:41987645:C:T 107970/140122)	-	Apr 25, 2021 (155)
100	gnomAD - Genomes Submission ignored due to conflicting rows: Row 8834893 (NC_000001.11:41987645:C:G 2809/140160) Row 8834894 (NC_000001.11:41987645:C:T 107970/140122)	-	Apr 25, 2021 (155)
101	HapMap	NC_000001.11 - 41987646	Apr 25, 2020 (154)
102	KOREAN population from KRGDB	NC_000001.10 - 42453317	Apr 25, 2020 (154)
103	Korean Genome Project	NC_000001.11 - 41987646	Apr 25, 2020 (154)
104	Northern Sweden Submission ignored due to conflicting rows: Row 260929 (NC_000001.10:42453316:C:C 195/600, NC_000001.10:42453316:C:T 405/600) Row 260930 (NC_000001.10:42453316:C:C 580/600, NC_000001.10:42453316:C:G 20/600)	-	Jul 12, 2019 (153)
105	Northern Sweden Submission ignored due to conflicting rows: Row 260929 (NC_000001.10:42453316:C:C 195/600, NC_000001.10:42453316:C:T 405/600) Row 260930 (NC_000001.10:42453316:C:C 580/600, NC_000001.10:42453316:C:G 20/600)	-	Jul 12, 2019 (153)
106	Qatari	NC_000001.10 - 42453317	Apr 25, 2020 (154)
107	SGDP_PRJ	NC_000001.10 - 42453317	Apr 25, 2020 (154)
108	Siberian	NC_000001.10 - 42453317	Apr 25, 2020 (154)
109	8.3KJPN	NC_000001.10 - 42453317	Apr 25, 2021 (155)
110	14KJPN	NC_000001.11 - 41987646	Oct 13, 2022 (156)
111	TopMed	NC_000001.11 - 41987646	Apr 25, 2021 (155)
112	UK 10K study - Twins Submission ignored due to conflicting rows: Row 680580 (NC_000001.10:42453316:C:C 1105/3708, NC_000001.10:42453316:C:T 2603/3708) Row 680581 (NC_000001.10:42453316:C:C 3584/3708, NC_000001.10:42453316:C:G 124/3708)	-	Oct 11, 2018 (152)
113	UK 10K study - Twins Submission ignored due to conflicting rows: Row 680580 (NC_000001.10:42453316:C:C 1105/3708, NC_000001.10:42453316:C:T 2603/3708) Row 680581 (NC_000001.10:42453316:C:C 3584/3708, NC_000001.10:42453316:C:G 124/3708)	-	Oct 11, 2018 (152)
114	A Vietnamese Genetic Variation Database	NC_000001.10 - 42453317	Jul 12, 2019 (153)
115	ALFA	NC_000001.11 - 41987646	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17191954	Oct 07, 2004 (123)
rs57796836	May 24, 2008 (130)
rs61193987	Feb 26, 2009 (130)
rs111177265	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss1584439041	NC_000001.9:42225903:C:G	NC_000001.11:41987645:C:G	(self)
1254595, 689216, ss1290548462, ss1599996036, ss1642990069, ss2754152806, ss2986676938, ss3726976065, ss3848672236, ss5625362755, ss5831845290	NC_000001.10:42453316:C:G	NC_000001.11:41987645:C:G	(self)
1619656, 11753497068, ss2161788287, ss3686604510, ss5241968555, ss5443065806, ss5514093721	NC_000001.11:41987645:C:G	NC_000001.11:41987645:C:G	(self)
ss77111677, ss78019823, ss81079258, ss81516105, ss84099895	NC_000001.8:42122409:C:T	NC_000001.11:41987645:C:T	(self)
ss66366804, ss76090248, ss108151011, ss110346646, ss118645376, ss163312828, ss164166423, ss172468108, ss198354101, ss205118317, ss253053545, ss275797788, ss290812593, ss1584439042, ss1712327028	NC_000001.9:42225903:C:T	NC_000001.11:41987645:C:T	(self)
1254595, 480651, 1471831, 823026, 326556, 689216, 184921, 1512796, 139952, ss218344897, ss230506166, ss238206040, ss554027369, ss647816829, ss1067824602, ss1290548463, ss1425783650, ss1574012789, ss1599996035, ss1642990068, ss1794236369, ss1918284626, ss1966729473, ss2147668567, ss2624343903, ss2697577461, ss2754152806, ss2985506631, ss2986676939, ss3640979025, ss3641272939, ss3654742403, ss3726976064, ss3746097911, ss3783387955, ss3789050661, ss3793923336, ss3826132380, ss3836453704, ss3848672236, ss3893645632, ss5143543489, ss5625362755, ss5831845289, ss5937186394	NC_000001.10:42453316:C:T	NC_000001.11:41987645:C:T	(self)
1619656, 53027, 703848, 2024175, 10238233, 11753497068, ss2161788287, ss3023591533, ss3646647805, ss3686604511, ss3799111568, ss3841859280, ss3944325847, ss4446631898, ss5241968554, ss5443065805, ss5514093721, ss5668187071, ss5800521957, ss5848873865	NC_000001.11:41987645:C:T	NC_000001.11:41987645:C:T	(self)
ss20590300	NT_032977.6:4059763:C:T	NC_000001.11:41987645:C:T	(self)
ss814919, ss933618, ss1916897, ss24607424, ss41085860, ss81430642, ss99203152, ss106562319, ss154918562	NT_032977.9:12425234:C:T	NC_000001.11:41987645:C:T	(self)
ss9816715, ss11349109	NT_077386.2:4060337:C:T	NC_000001.11:41987645:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs642112

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs642112