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Reference SNP (refSNP) Cluster Report: rs508001                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:83/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitWith1000GenomeData
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/C (FWD)
Allele Origin:
Ancestral Allele:C
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:C=0.1721/862 (1000 Genomes)
C=0.1739/21841 (TOPMED)
HGVS Names
  • CM000672.2:g.97995216A>C
  • NC_000010.10:g.99754973A>C
  • NC_000010.11:g.97995216A>C
  • NG_029831.1:g.40613T>G
  • NM_001206528.2:c.224+15922T>G
  • NM_018058.6:c.224+15922T>G
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss280740262 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs508001 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss678083SC_JCM|AL139239.4_37044rev/BG/Tagccaggccagactgtggtccttggactgtcctctctagaagagcatggagttcaaaatc07/27/0010/10/0383Genomicunknown
ss1357051TSC-CSHL|TSC0234540fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct09/06/0010/25/0686Genomic95 %
ss23586648PERLEGEN|afd4361277byFreqfwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct08/10/0409/13/04123Genomicunknown
ss38569972ABI|hCV1079637byFreqfwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct07/15/0511/02/06126Genomicunknown
ss66653449ILLUMINA|HumanHap300v1.1_rs508001fwd/BA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct11/09/0611/09/06127Genomicunknown
ss67411180ILLUMINA|HumanHap550v1.1_rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct11/14/0611/14/06127Genomicunknown
ss67776096ILLUMINA|HumanHap650Yv1.0_rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct11/14/0611/14/06127Genomicunknown
ss70842376ILLUMINA|HumanHap550v3.0__rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct04/20/0703/31/08130Genomicunknown
ss71426466ILLUMINA|HumanHap650Yv3.0_rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct04/23/0704/23/07127Genomicunknown
ss75523947ILLUMINA|ILMN_Human_1M_rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct08/28/0708/29/07129Genomicunknown
ss79206540ILLUMINA|HumanHap300v2.0_rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct04/18/0711/18/07130Genomicunknown
ss82866179HGSV|Cor19240_SNV_20070510.chr10_99744963fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct11/30/0712/03/07130Genomicunknown
ss83469970KRIBB_YJKIM|KHS469072fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct12/04/0712/05/07130Genomicunknown
ss1137006261000GENOMES|NA19240_2008_12_16_2179201_chr10_99744963fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct12/18/0812/18/08130Genomicunknown
ss122455092ILLUMINA|HumanCNV370v1_C_rs508001fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct04/14/0904/15/09131Genomicunknown
ss154335830ILLUMINA|Human610_Quadv1_B_rs508001-128_T_F_1501801341fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct06/18/0906/20/09131Genomicunknown
ss159512426ILLUMINA|Human660W-Quad_v1_A_rs508001-128_T_F_1501801341fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct07/06/0907/07/09131Genomicunknown
ss160737962ILLUMINA|HumanOmni1-Quad_v1-0_B_rs508001-128_T_F_1512169884fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct08/04/0910/04/09131Genomicunknown
ss170913944COMPLETE_GENOMICS|NA19240_36_chr10_99744963fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct10/01/0910/04/09132Genomicunknown
ss172013318ILLUMINA|HumanCNV370-Quadv3_C_rs508001-128_T_F_1501801341fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct10/01/0910/04/09132Genomicunknown
ss173908979ILLUMINA|Human1M-Duov3_B_rs508001-128_T_F_1501801341fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct10/01/0910/04/09132Genomicunknown
ss201912479BUSHMAN|BUSHMAN-chr10-99744962fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct02/16/1003/08/10132Genomicunknown
ss2248949811000GENOMES|pilot_1_YRI_6704664_chr10_99744963fwd/A/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct04/22/1004/22/10132Genomicunknown
ss2353012441000GENOMES|pilot_1_CEU_4905873_chr10_99744963fwd/A/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct05/01/1005/01/10132Genomicunknown
ss2419824881000GENOMES|pilot_1_CHB+JPT_3867565_chr10_99744963fwd/A/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct05/01/1005/01/10132Genomicunknown
ss280740262GMI|GMI_AK_SNP_5060597fwd/A/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct12/16/1012/16/10137Genomicunknown
ss481131993ILLUMINA|HumanOmni2.5-4v1_B_rs508001-128_T_F_1770558991fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc01/30/1210/28/16137Genomicunknown
ss481154030ILLUMINA|HumanOmniExpress-12v1_C_rs508001-131_T_F_1857741774fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc01/30/1210/27/16137Genomicunknown
ss482143545ILLUMINA|HumanOmni1-Quad_v1-0_C_rs508001-131_T_F_1865555936fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc01/30/1208/28/15146Genomicunknown
ss485361028ILLUMINA|HumanOmni2.5-4v1_D_rs508001-131_T_F_1857741774fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc01/30/1210/27/16137Genomicunknown
ss491439175EXOME_CHIP|.GWAS._155401_chr_10_99754973fwd/TA/Cgattttgaactccatgctcttctagagaggacagtccaaggaccacagtctggcctggct03/05/1203/05/12137Genomicunknown
ss537305345ILLUMINA|HumanOmni5-4v1_B_rs508001-131_T_F_1866552324fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc06/22/1208/29/15146Genomicunknown
ss562155733TISHKOFF|snp_chr10_99754973fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc11/22/1211/23/12138Genomicunknown
ss657215142SSMP|10_99754973fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc12/14/1202/12/15138Genomicunknown
ss778928091ILLUMINA|HumanOmni25Exome-8v1_A_rs508001-131_T_F_1866552324fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/30/1307/10/15142Genomicunknown
ss780685574ILLUMINA|HumanOmni25Exome-8v1_A_exm-rs508001-131_T_F_1990492819fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/30/1307/10/15142Genomicunknown
ss783126198ILLUMINA|HumanOmni2.5-4v1_H_rs508001-131_T_F_1857741774fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/30/1307/29/15142Genomicunknown
ss783359068ILLUMINA|HumanOmniExpressExome-8v1_A_exm-rs508001-131_T_F_1990492819fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/31/1306/18/15142Genomicunknown
ss784082806ILLUMINA|HumanOmniExpressExome-8v1_A_rs508001-131_T_F_1967908912fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/31/1306/18/15142Genomicunknown
ss825537058ILLUMINA|HumanCNV370v1_C_rs508001-126_T_F_IFB1135537155:0fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc06/24/1311/21/14144Genomicunknown
ss832385040ILLUMINA|HumanOmniExpress-12v1_H_rs508001-131_T_F_1857741774fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/17/1306/18/15144Genomicunknown
ss833023730ILLUMINA|Human660W-Quad_v1_C_rs508001-131_T_F_1857741774fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/18/1307/02/15142Genomicunknown
ss833614558ILLUMINA|Human660W-Quad_v1_H_rs508001-131_T_F_1857741774fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/18/1307/02/15142Genomicunknown
ss834389600ILLUMINA|HumanOmni2.5-8v1_A_rs508001-131_T_F_1866552324fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/18/1307/29/15142Genomicunknown
ss987828969EVA-GONL|EVA-GONL_rs508001fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc04/23/1404/25/14142Genomicunknown
ss1077232033JMKIDD_LAB|HGDP_WGS_chr10_99754973fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc07/10/1407/11/14142Genomicunknown
ss13387122931000GENOMES|PHASE3_V1_51418593fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc08/16/1408/16/14142Genomicunknown
ss1575308347EVA_GENOME_DK|EVA_GENOME_DK_snv_rs508001fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc02/19/1502/19/15144Genomicunknown
ss1597502254EVA_DECODE|EVA_DECODE_10_99744963_758243_rs508001fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc03/02/1503/04/15144Genomicunknown
ss1625244571EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_10_99754973_28399111fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc03/04/1503/04/15144Genomicunknown
ss1668238604EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_10_99754973_28399111fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc03/04/1503/04/15144Genomicunknown
ss1713204547EVA_SVP|EVA_SVP_898914fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc03/12/1503/12/15144Genomicunknown
ss1751989934ILLUMINA|OmniExpressExome-8v1-1_B_exm-rs508001-131_T_F_2060141536fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/27/1506/09/15146Genomicunknown
ss1751989935ILLUMINA|OmniExpressExome-8v1-1_B_rs508001-131_T_F_1967908912fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/27/1506/09/15146Genomicunknown
ss1806529894HAMMER_LAB|Hsieh_5548452fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc07/15/1507/16/15146Genomicunknown
ss1917850337ILLUMINA|HumanExome-12v1-1_B_exm-rs508001-131_T_F_2060141536fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc10/16/1510/16/15147Genomicunknown
ss1931193710WEILL_CORNELL_DGM|SNV:chr10:99754973fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc10/16/1510/17/15147Genomicunknown
ss1946290678ILLUMINA|HumanCoreExome-12v1-0_C_exm-rs508001-131_T_F_2060141536fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc10/29/1510/29/15147Genomicunknown
ss1946290679ILLUMINA|HumanCoreExome-12v1-0_C_rs508001-131_T_F_1967908912fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc10/29/1510/29/15147Genomicunknown
ss1959287213ILLUMINA|exm-rs508001-131_T_F_1990492819fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc11/13/1511/13/15147Genomicunknown
ss1959287214ILLUMINA|rs508001-131_T_F_1885471116fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc11/13/1511/13/15147Genomicunknown
ss2026326422JJLAB|SNP6828977fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc08/29/1608/30/16149Genomicunknown
ss2094788942ILLUMINA|Immuno_BeadChip_11419691_B_rs508001-131_T_F_1866552324fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/27/1609/27/16150Genomicunknown
ss2095016602ILLUMINA|InfiniumImmunoArray-24v2-0_A_rs508001-131_T_F_1866552324fwd/TA/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/27/1609/27/16150Genomicunknown
ss2154603585USC_VALOUEV|NC_000010.10:g.99754973A>Cfwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc11/17/1611/17/16151Genomicunknown
ss2177330371HUMAN_LONGEVITY|HLI-10-97995216-A-Cfwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc11/18/1611/18/16150Genomicunknown
ss2340449106TOPMED|10_99754973_A/Cfwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc11/19/1611/19/16150Genomicunknown
ss2632751547ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_SoL-rs508001-131_T_F_21311fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc02/02/1702/02/17151Genomicunknown
ss2632751548ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs508001-131_T_F_196790891fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc02/02/1702/02/17151Genomicunknown
ss2632751549ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_seq-rs508001-131_T_F_21302fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc02/02/1702/02/17151Genomicunknown
ss2698856189GRF|rs508001fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc02/13/1702/13/17151Genomicunknown
ss2710718082ILLUMINA|Consortium-OncoArray_15047405_A_rs508001-131_T_F_1967908912fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc03/22/1703/22/17151Genomicunknown
ss2892382507GNOMAD|rs508001fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/19/1705/19/17151Genomicunknown
ss2984920894AFFY|Axiom_PsorMich_Affx-3929143fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/24/1705/24/17151Genomicunknown
ss3007003886SWEGEN|NC_000010.10:g.99754973A>Cfwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc05/30/1705/30/17151Genomicunknown
ss3021267158ILLUMINA|MEGA_Consortium_v2_15070954_A2_exm-rs508001-131_T_F_1990492819fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc06/28/1706/28/17151Genomicunknown
ss3021267159ILLUMINA|MEGA_Consortium_v2_15070954_A2_rs508001-138_T_F_2269240243fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc06/28/1706/28/17151Genomicunknown
ss3026953007BIOINF_KMB_FNS_UNIBA|10.97995216A>Cfwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc07/05/1707/05/17151Genomicunknown
ss3128104214TOPMED|TOPMed_freeze_5?chr10:97,995,216fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc09/29/1709/29/17151Genomicunknown
ss3349271464CSHL|rs508001fwd/A/Ctgaactccatgctcttctagagaggacagtccaaggaccacagtctggcc10/02/1710/02/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs508001|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/C'|mol=Genomic|build=151
 TTTCAGATCA AGATACTGAT TAGATACTGG ACTAATCCCT AGTGGCCAAA GGGCTACTTT
 GATTGGCAGC CCCACAGGAT CCTGTGATTG GAACAGTTCT CCAGAGGAGG AGTATTCTTC
 CCAGAAGGAA TGAAGGTCCT GTGGAGGCCC AAGGAGCAGA TCCGGCCACC TTATCCTGTG
 TGAGGAGCTC TGGAATGCAT TGCTGCTTTC CAGGATAGCT CCCAAGCAGG GAGAATCCCC
 TTCCACTGCC CAATCATGGA CAGCATACAG AATGACTGCA ACAGCTGGGC ACATCAAAGG
 ATACTGTGTA GTTGTCCATG ACCTCATATG GCTATAGGTA TTTTATAAAC AACATGGGAA
 GATGGCTGCT GAGGGGGAAG GAATCTTTTC TGATGTGCAC AGTTCATGTT TCTTTGCTTG
 GCATAGCCAA ACACCAGTGG ATGGTATCAT CTGTGCTGTG AACAGATTCT GATTTTGAAC
 TCCATGCTCT TCTAGAGAGG
 M
 ACAGTCCAAG GACCACAGTC TGGCCTGGCT TTTCTTGGTG CATGGGGCTT CCTGCACATA
 CATGCTTCTC TCCCCCAACA TACACACAAA CACACACACA CACCCCTCCT CATCTGTCTT
 ATACCCAAGA CTTCCATGCT GTAGAACTCT TTCTATTTTG CAAGAAGAGA GTTCGAGCAT
 CTCTGAAAAG CTAAGGGGAA GGACCTCTTA AATCCTACTT CCTTTAGTTT CACGTACCCT
 CCAATGTCTT CTTGGTGATA GAAAGAACAC AAGCTTTGGA TTTCCTAAGT CTATTTTTCT
 GTTTCCAATG GTATGCAGAC CTCTGAAGGA CCCTACCACT ACAGAACAAG TAGATCCCCA
 ATGAACTATA TTTTTAGTGT ATTACTGGGT TCACAAACTT AAGGAAAATC TCCAAGAACC
 ATCCCACCCC ACAGAAAAGT GAGCTGAAAT TAGACCTGGC AGCAATGAAT GGTAAATACA
 TGGAAATGAG GGACTCTGAG

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NC_000010.5 AC015630 AL139239.3
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA/A
A/C
C/C
HWPA
C
ss1338712293EAS 1008AF 0.911700010.08830000
EUR 1006AF 0.877699970.12230000
AFR 1322AF 0.670199990.32980001
AMR 694AF 0.919300020.08070000
SAS 978AF 0.838400010.16159999
ss170913944YRISub-Saharan African 2IG 1.00000000 0.500000000.50000000
ss201912479BANTU 2IG 1.00000000 0.500000000.50000000
ss224894981pilot_1_YRI_low_coverage_panel 118AF 0.669491530.33050847
ss235301244pilot_1_CEU_low_coverage_panel 120AF 0.833333310.16666667
ss23586648AFD_EUR_PANELEuropean 48IG0.791666690.20833333 1.000000000.895833310.10416666
AFD_AFR_PANELAfrican American 46IG0.478260870.478260870.043478260.402784000.717391310.28260869
AFD_CHN_PANELAsian 46IG0.782608690.21739130 1.000000000.891304370.10869565
ss241982488pilot_1_CHB+JPT_low_coverage_panel 120AF 0.908333360.09166667
ss38569972HapMap-CEUEuropean 226IG0.743362840.230088500.026548670.583882000.858407080.14159292
HapMap-HCBAsian 86IG0.767441870.23255815 0.751830000.883720930.11627907
HapMap-JPTAsian 172IG0.837209280.127906980.034883720.010028000.901162800.09883721
HapMap-YRISub-Saharan African 226IG0.477876100.407079640.115044250.527089000.681415920.31858408
AoD_African_American 90AF 0.690000000.31000000
AoD_Caucasian 92AF 0.870000000.13000000
AoD_Chinese 90AF 0.920000020.08000000
AoD_Japanese 90AF 0.889999990.11000000
HAPMAP-ASW 98IG0.551020380.346938790.102040820.371093000.724489810.27551019
HAPMAP-CHBAsian 82IG0.756097560.195121940.048780490.200325000.853658560.14634146
HAPMAP-CHD 170IG0.847058830.141176480.011764710.583882000.917647060.08235294
HAPMAP-GIH 176IG0.636363630.329545470.034090910.751830000.801136370.19886364
HAPMAP-LWK 180IG0.366666670.511111140.122222220.438578000.622222240.37777779
HAPMAP-MEX 100IG0.839999970.140000000.020000000.317310000.910000030.09000000
HAPMAP-MKK 286IG0.314685310.468531460.216783210.527089000.548951030.45104894
HAPMAP-TSI 176IG0.727272750.250000000.022727271.000000000.852272750.14772727
ENSEMBL_Watson 2IG1.00000000 1.00000000
ENSEMBL_Venter 2IG1.00000000 1.00000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.285+/-0.2480000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNP
UNKNOWNUNKNOWNUNKNOWN

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