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Reference SNP (refSNP) Cluster Report: rs41469                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:76/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqWith1000GenomeData
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/G (REV)
Allele Origin:
Ancestral Allele:G
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:T=0.0658/7911 (ExAC)
T=0.1436/719 (1000 Genomes)
T=0.0265/345 (GO-ESP)
T=0.0654/8216 (TOPMED)
HGVS Names
  • CM000667.2:g.9629701C>T
  • NC_000005.10:g.9629701C>T
  • NC_000005.9:g.9629813C>T
  • NM_019599.2:c.332G>A
  • NP_062545.1:p.Arg111His
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss278164619 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs41469 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss46961KWOK|OVLP-101273rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa04/28/0010/10/0376Genomic91 %
ss588997SC_JCM|AC026787.2_41456rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa07/12/0010/10/0380Genomicunknown
ss1032719KWOK|OVLP-000804-432229fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag09/02/0010/10/0386Genomic97 %
ss1967138KWOK|OVLP-000925-723653fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag10/06/0010/10/0389Genomic97 %
ss2537237SC_JCM|AC034214.4_39489fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag11/03/0010/10/0392Genomicunknown
ss2718533TSC-CSHL|TSC0747106byFreqfwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag01/02/0110/25/0692Genomicunknown
ss3181752GENAISSANCE|GEN3435fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag07/19/0110/10/0398Genomicunknown
ss3225796YUSUKE|IMS-JST035880byFreqfwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag09/05/0110/10/03100Genomicunknown
ss48411511APPLERA_GI|hCV2259143byFreqfwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag09/28/0511/03/06126Genomicunknown
ss65728189ILLUMINA|Human1-rs41469fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag10/10/0610/10/06127Genomicunknown
ss68926915PERLEGEN|PGP04232753byFreqrev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa01/30/0708/14/07127Genomicunknown
ss74807441AFFY|SNP_M-178113fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag08/09/0708/09/07128Genomicunknown
ss74910559ILLUMINA|ILMN_Human_1M_rs41469fwd/TA/Gttttctattgtgccaaggttgccagcgtcctcacccactcttcatctggttgaagatgag08/28/0708/29/07129Genomicunknown
ss105905593BGI|BGI_rs41469rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa09/12/0806/18/09130Genomicunknown
ss1114113521000GENOMES|NA19240_2008_12_16_1080158_chr5_9682813rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa12/17/0812/17/08130Genomicunknown
ss155028415GMI|GMI_SNP_94749218rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa06/24/0906/24/09131Genomicunknown
ss159709094SEATTLESEQ|TAS2R1-9682813rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa07/10/0907/10/09131Genomicunknown
ss160663913ILLUMINA|HumanOmni1-Quad_v1-0_B_rs41469-128_B_R_1513940531rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa08/04/0910/04/09131Genomicunknown
ss164203541COMPLETE_GENOMICS|NA19240_36_chr5_9682813rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa09/29/0909/29/09132Genomicunknown
ss173692217ILLUMINA|Human1M-Duov3_B_rs41469-128_B_R_1513940531rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa10/01/0910/04/09132Genomicunknown
ss2215121021000GENOMES|pilot_1_YRI_3321785_chr5_9682813rev/C/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa04/22/1004/22/10132Genomicunknown
ss2400233991000GENOMES|pilot_1_CHB+JPT_1908476_chr5_9682813rev/C/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa05/01/1005/01/10132Genomicunknown
ss278164619GMI|GMI_AK_SNP_2484852rev/C/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa12/16/1012/16/10137Genomicunknown
ss342177788NHLBI-ESP|ESP2500-chr5-9629813byFreqrev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa03/25/1109/05/14134Genomicunknown
ss480897165ILLUMINA|HumanOmni2.5-4v1_B_rs41469-128_B_R_1747411270rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata01/30/1210/28/16137Genomicunknown
ss480916058ILLUMINA|HumanOmniExpress-12v1_C_rs41469-131_B_R_1857547278rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata01/30/1210/27/16137Genomicunknown
ss481870249ILLUMINA|HumanOmni1-Quad_v1-0_C_rs41469-131_B_R_1865395637rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata01/30/1208/28/15146Genomicunknown
ss485243598ILLUMINA|HumanOmni2.5-4v1_D_rs41469-131_B_R_1857547278rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata01/30/1210/28/16137Genomicunknown
ss4909002421000GENOMES|20110521_exome_408040_chr5_9629813rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa02/10/1202/21/12137Genomicunknown
ss491364432EXOME_CHIP|nonsyn_80659_chr_5_9629813rev/BC/Tctcatcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaatagaaaa03/05/1203/05/12137Genomicunknown
ss491864495CLINSEQ_SNP|SNV-chr5-9682813byFreqrev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/06/1209/05/14137Genomicunknown
ss537216799ILLUMINA|HumanOmni5-4v1_B_rs41469-131_B_R_1866549215rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata06/22/1208/28/15146Genomicunknown
ss558198174TISHKOFF|snp_chr5_9629813rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata11/22/1211/23/12138Genomicunknown
ss652042853SSMP|5_9629813rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata12/14/1202/10/15138Genomicunknown
ss778530864ILLUMINA|HumanOmni25Exome-8v1_A_rs41469-131_B_R_1866549215rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/30/1307/09/15142Genomicunknown
ss780835378ILLUMINA|HumanOmni25Exome-8v1_A_exm444239-0_B_F_1921212618rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/30/1307/09/15146Genomicunknown
ss783067737ILLUMINA|HumanOmni2.5-4v1_H_rs41469-131_B_R_1857547278rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/30/1307/28/15142Genomicunknown
ss783518486ILLUMINA|HumanOmniExpressExome-8v1_A_exm444239-0_B_F_1921212618rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/31/1306/19/15146Genomicunknown
ss784025645ILLUMINA|HumanOmniExpressExome-8v1_A_rs41469-131_B_R_1967904966rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/31/1306/19/15142Genomicunknown
ss832325811ILLUMINA|HumanOmniExpress-12v1_H_rs41469-131_B_R_1857547278rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata09/17/1306/18/15144Genomicunknown
ss833987390ILLUMINA|HumanOmni2.5-8v1_A_rs41469-131_B_R_1866549215rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata09/18/1307/28/15142Genomicunknown
ss981239742EVA-GONL|EVA-GONL_rs41469rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata04/23/1404/24/14142Genomicunknown
ss1067466759JMKIDD_LAB|HGDP_exomes_chr5_9629813rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata07/09/1407/09/14142Genomicunknown
ss1072383416JMKIDD_LAB|HGDP_WGS_chr5_9629813rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata07/10/1407/11/14142Genomicunknown
ss13138704231000GENOMES|PHASE3_V1_25556392rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata08/16/1408/16/14142Genomicunknown
ss1397404858HAMMER_LAB|HAMMER_LAB_rs41469rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata09/30/1409/30/14146Genomicunknown
ss1584037856EVA_FINRISK|EVA_FINRISK_rs41469rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata02/27/1502/27/15144Genomicunknown
ss1590755548EVA_DECODE|EVA_DECODE_5_9682813_86229_rs41469rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/02/1503/03/15144Genomicunknown
ss1612257347EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_5_9629813_14146242rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/04/1503/04/15144Genomicunknown
ss1655251380EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_5_9629813_14146242rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/04/1503/04/15144Genomicunknown
ss1687748309EVA_EXAC|EVA_EXAC_2730230rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/04/1503/04/15144Genomicunknown
ss1711081348EVA_MGP|EVA_XIMO_197108rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/09/1503/09/15144Genomicunknown
ss1712743451EVA_SVP|EVA_SVP_437818rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata03/12/1503/12/15144Genomicunknown
ss1752591036ILLUMINA|OmniExpressExome-8v1-1_B_exm444239-0_B_F_1921212618rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/27/1506/09/15146Genomicunknown
ss1752591037ILLUMINA|OmniExpressExome-8v1-1_B_rs41469-131_B_R_1967904966rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/27/1506/09/15146Genomicunknown
ss1803047278HAMMER_LAB|Hsieh_2727720rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata07/15/1507/15/15146Genomicunknown
ss1917787985ILLUMINA|HumanExome-12v1-1_B_exm444239-0_B_F_1921212618rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata10/16/1510/16/15147Genomicunknown
ss1924499898WEILL_CORNELL_DGM|SNV:chr5:9629813rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata10/16/1510/17/15147Genomicunknown
ss1946138205ILLUMINA|HumanCoreExome-12v1-0_C_exm444239-0_B_F_1921212618rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata10/29/1510/29/15147Genomicunknown
ss1958766131ILLUMINA|exm444239-0_B_F_1921212618rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata11/13/1511/13/15147Genomicunknown
ss1970011133GENOMED|rs41469rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata02/16/1602/16/16147Genomicunknown
ss2022847400JJLAB|SNP3349955rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata08/29/1608/30/16149Genomicunknown
ss2094817766ILLUMINA|Immuno_BeadChip_11419691_B_rs41469-131_B_R_1866549215rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata09/27/1609/27/16150Genomicunknown
ss2095153305ILLUMINA|InfiniumImmunoArray-24v2-0_A_rs41469-131_B_R_1866549215rev/BC/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata09/27/1609/27/16150Genomicunknown
ss2150996504USC_VALOUEV|NC_000005.9:g.9629813C>Trev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata11/17/1611/17/16150Genomicunknown
ss2271304669HUMAN_LONGEVITY|HLI-5-9629701-C-Trev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata11/18/1611/18/16150Genomicunknown
ss2439291529TOPMED|5_9629813_C/Trev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata11/20/1611/20/16150Genomicunknown
ss2625922818SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV2142699rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata01/06/1701/06/17151Genomicunknown
ss2634244945ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs41469-131_B_R_1967904966rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata02/02/1702/02/17151Genomicunknown
ss2706521634GRF|rs41469rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata02/13/1702/13/17151Genomicunknown
ss2734905511GNOMAD|exomes_rs41469rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/17/1705/17/17151Genomicunknown
ss2747356946GNOMAD|coding_rs41469rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/17/1705/17/17151Genomicunknown
ss2821053152GNOMAD|rs41469rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/18/1705/18/17151Genomicunknown
ss2985315487AFFY|Axiom_PsorMich_Affx-27220744rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/24/1705/24/17151Genomicunknown
ss2996425232SWEGEN|NC_000005.9:g.9629813C>Trev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata05/30/1705/30/17151Genomicunknown
ss3022465431ILLUMINA|MEGA_Consortium_v2_15070954_A2_exm444239-0_B_F_1921212618rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata06/28/1706/28/17151Genomicunknown
ss3455990871TOPMED|TOPMed_freeze_5?chr5:9,629,701rev/C/Tcttcaaccagatgaagagtgggtgaggacgctggcaaccttggcacaata10/04/1710/04/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs41469|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=151
 GAGAAAGCAG TGACATAAAC AAATGTACAC CACCTTCCTG CCCCATGCCT TTATTGTTAG
 TCTTCTTCCC CAGAGGAGTC CTGATCTAAT TGAAGAGCGT GAACAACCCA ACCTGTCCAA
 AACTTTATAA CTTCATTATT TTTTAAGTAA ATAATTTTTT ATTCCTAAAA TGCTAGAGTC
 TCACCTCATT ATCTATTTTC TTCTTGCAGT GATACAATTT CTTCTTGGGA TTTTCACAAA
 TGGCATCATT GTGGTGGTGA ATGGCATTGA CTTGATCAAG CACAGAAAAA TGGCTCCGCT
 GGATCTCCTT CTTTCTTGTC TGGCAGTTTC TAGAATTTTT CTGCAGTTGT TCATCTTCTA
 CGTTAATGTG ATTGTTATCT TCTTCATAGA ATTCATCATG TGTTCTGCGA ATTGTGCAAT
 TCTCTTATTT ATAAATGAAT TGGAACTTTG GCTTGCCACA TGGCTCGGCG TTTTCTATTG
 TGCCAAGGTT GCCAGCGTCC
 R
 TCACCCACTC TTCATCTGGT TGAAGATGAG GATATCCAAG CTGGTCCCAT GGATGATCCT
 GGGGTCTCTG CTATATGTAT CTATGATTTG TGTTTTCCAT AGCAAATATG CAGGGTTTAT
 GGTCCCATAC TTCCTAAGGA AATTTTTCTC CCAAAATGCC ACAATTCAAA AAGAAGATAC
 ACTGGCTATA CAGATTTTCT CTTTTGTTGC TGAGTTCTCA GTGCCATTGC TTATCTTCCT
 TTTTGCTGTT TTGCTCTTGA TTTTCTCTCT GGGGAGGCAC ACCCGGCAAA TGAGAAACAC
 AGTGGCCGGC AGCAGGGTTC CTGGCAGGGG TGCACCCATC AGCGCGTTGC TGTCTATCCT
 GTCCTTCCTG ATCCTCTACT TCTCCCACTG CATGATAAAA GTTTTTCTCT CTTCTCTAAA
 GTTTCACATC AGAAGGTTCA TCTTTCTGTT CTTCATCCTT GTGATTGGTA TATACCCTTC
 TGGACACTCT CTCATCTTAA

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NC_000005.8 AC003015 AC026787 AC026787.3 AC034214
dbSNP Blast Analysis
UniGene Cluster ID
533930

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] Note: rs41469 allele is reverse to the genome back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA/A
A/G
C/C
C/T
G/G
T/T
HWPA
C
G
T
ss1313870423EAS 1008AF 0.46430001 0.53570002
EUR 1006AF 0.00800000 0.99200004
AFR 1322AF 0.07940000 0.92060000
AMR 694AF 0.12970001 0.87030005
SAS 978AF 0.04910000 0.95090002
ss164203541YRISub-Saharan African 2IG 1.00000000 0.50000000 0.50000000
ss1687748309ExAc_Aggregated_Populations121400AF 0.06557661 0.93442339
ss221512102pilot_1_YRI_low_coverage_panel 118AF 0.05084746 0.94915253
ss240023399pilot_1_CHB+JPT_low_coverage_panel 120AF 0.50833333 0.49166667
ss2718533CEPH 184AF 1.00000000
EURAME 32GF 1.00000000 1.00000000
AFRAME 32GF 0.25000000 0.750000000.58388200 0.12500000 0.87500000
ss3225796JBIC-allele 1464AF 0.45770001 0.54229999
ss342177788ESP_Cohort_Populations 4510GF0.002217290.05676275 0.94101995 0.050043000.03059867 0.96940136
ss48411511HapMap-CEUEuropean 224IG 0.01785714 0.98214287 1.000000000.00892857 0.99107140
HapMap-HCBAsian 86IG0.302325580.51162791 0.18604651 1.000000000.55813956 0.44186047
HapMap-JPTAsian 170IG0.223529410.55294120 0.22352941 0.342782000.50000000 0.50000000
HapMap-YRISub-Saharan African 222IG 0.20720720 0.79279280 0.654721000.10360360 0.89639640
AGI_ASP populationmultiple 74IG 0.08108108 0.91891891 1.000000000.04054054 0.95945948
HAPMAP-ASW 98IG 0.08163265 0.91836733 1.000000000.04081633 0.95918369
HAPMAP-CHBAsian 82IG0.170731710.58536583 0.24390244 0.273322000.46341464 0.53658539
HAPMAP-CHD 168IG0.178571430.51190478 0.30952382 0.751830000.43452382 0.56547618
HAPMAP-GIH 176IG 0.04545455 0.95454544 1.000000000.02272727 0.97727275
HAPMAP-LWK 178IG0.011235960.13483146 0.85393256 0.527089000.07865169 0.92134833
HAPMAP-MEX 96IG0.020833330.31250000 0.66666669 0.654721000.17708333 0.82291669
HAPMAP-MKK 286IG 0.18881118 0.81118882 0.654721000.09440559 0.90559441
ENSEMBL_Watson 2IG 1.00000000 1.00000000
ss491864495CSAgilent 1270GF0.001998000.01298701 0.98501498 0.001000000.00849151 0.99150848
ss68926915HapMap-CEUEuropean 120IG 0.01666667 0.98333335 1.000000000.00833333 0.99166667
HapMap-HCBAsian 90IG0.288888900.53333336 0.17777778 0.654721000.55555558 0.44444445
HapMap-JPTAsian 90IG0.200000000.53333336 0.26666668 0.654721000.46666667 0.53333336
HapMap-YRISub-Saharan African 120IG 0.16666667 0.83333331 1.000000000.08333334 0.91666669

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.123+/-0.2150000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqWith1000GenomeDataUNKNOWNUNKNOWNUNKNOWN

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