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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3745779

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr19:36573130 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.196233 (51941/264690, TOPMED)
C=0.219333 (44736/203964, ALFA)
C=0.205906 (28812/139928, GnomAD) (+ 19 more)
C=0.12435 (3514/28258, 14KJPN)
C=0.12064 (2022/16760, 8.3KJPN)
C=0.1774 (1136/6404, 1000G_30x)
C=0.1803 (903/5008, 1000G)
C=0.2658 (1191/4480, Estonian)
C=0.2084 (803/3854, ALSPAC)
C=0.2136 (792/3708, TWINSUK)
C=0.1745 (511/2928, KOREAN)
C=0.1607 (335/2084, HGDP_Stanford)
C=0.1808 (341/1886, HapMap)
C=0.1583 (290/1832, Korea1K)
C=0.225 (225/998, GoNL)
C=0.283 (170/600, NorthernSweden)
C=0.171 (37/216, Qatari)
C=0.159 (34/214, Vietnamese)
T=0.440 (59/134, SGDP_PRJ)
C=0.12 (10/82, Ancient Sardinia)
C=0.33 (13/40, GENOME_DK)
T=0.42 (5/12, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
ZNF529-AS1 : Non Coding Transcript Variant
ZNF529 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 203964 T=0.780667 C=0.219333
European Sub 173038 T=0.770507 C=0.229493
African Sub 7764 T=0.8083 C=0.1917
African Others Sub 276 T=0.848 C=0.152
African American Sub 7488 T=0.8069 C=0.1931
Asian Sub 750 T=0.825 C=0.175
East Asian Sub 572 T=0.829 C=0.171
Other Asian Sub 178 T=0.815 C=0.185
Latin American 1 Sub 988 T=0.836 C=0.164
Latin American 2 Sub 9058 T=0.8792 C=0.1208
South Asian Sub 5054 T=0.8467 C=0.1533
Other Sub 7312 T=0.8120 C=0.1880


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.803767 C=0.196233
Allele Frequency Aggregator Total Global 203964 T=0.780667 C=0.219333
Allele Frequency Aggregator European Sub 173038 T=0.770507 C=0.229493
Allele Frequency Aggregator Latin American 2 Sub 9058 T=0.8792 C=0.1208
Allele Frequency Aggregator African Sub 7764 T=0.8083 C=0.1917
Allele Frequency Aggregator Other Sub 7312 T=0.8120 C=0.1880
Allele Frequency Aggregator South Asian Sub 5054 T=0.8467 C=0.1533
Allele Frequency Aggregator Latin American 1 Sub 988 T=0.836 C=0.164
Allele Frequency Aggregator Asian Sub 750 T=0.825 C=0.175
gnomAD - Genomes Global Study-wide 139928 T=0.794094 C=0.205906
gnomAD - Genomes European Sub 75818 T=0.76928 C=0.23072
gnomAD - Genomes African Sub 41902 T=0.81903 C=0.18097
gnomAD - Genomes American Sub 13618 T=0.84565 C=0.15435
gnomAD - Genomes Ashkenazi Jewish Sub 3322 T=0.7959 C=0.2041
gnomAD - Genomes East Asian Sub 3122 T=0.8270 C=0.1730
gnomAD - Genomes Other Sub 2146 T=0.8062 C=0.1938
14KJPN JAPANESE Study-wide 28258 T=0.87565 C=0.12435
8.3KJPN JAPANESE Study-wide 16760 T=0.87936 C=0.12064
1000Genomes_30x Global Study-wide 6404 T=0.8226 C=0.1774
1000Genomes_30x African Sub 1786 T=0.8130 C=0.1870
1000Genomes_30x Europe Sub 1266 T=0.7701 C=0.2299
1000Genomes_30x South Asian Sub 1202 T=0.8286 C=0.1714
1000Genomes_30x East Asian Sub 1170 T=0.8462 C=0.1538
1000Genomes_30x American Sub 980 T=0.872 C=0.128
1000Genomes Global Study-wide 5008 T=0.8197 C=0.1803
1000Genomes African Sub 1322 T=0.8185 C=0.1815
1000Genomes East Asian Sub 1008 T=0.8502 C=0.1498
1000Genomes Europe Sub 1006 T=0.7624 C=0.2376
1000Genomes South Asian Sub 978 T=0.817 C=0.183
1000Genomes American Sub 694 T=0.865 C=0.135
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.7342 C=0.2658
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.7916 C=0.2084
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.7864 C=0.2136
KOREAN population from KRGDB KOREAN Study-wide 2928 T=0.8255 C=0.1745
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 T=0.8393 C=0.1607
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 T=0.843 C=0.157
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 T=0.826 C=0.174
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 T=0.774 C=0.226
HGDP-CEPH-db Supplement 1 Europe Sub 320 T=0.769 C=0.231
HGDP-CEPH-db Supplement 1 Africa Sub 242 T=0.897 C=0.103
HGDP-CEPH-db Supplement 1 America Sub 216 T=0.995 C=0.005
HGDP-CEPH-db Supplement 1 Oceania Sub 72 T=0.86 C=0.14
HapMap Global Study-wide 1886 T=0.8192 C=0.1808
HapMap American Sub 770 T=0.819 C=0.181
HapMap African Sub 686 T=0.827 C=0.173
HapMap Asian Sub 254 T=0.870 C=0.130
HapMap Europe Sub 176 T=0.716 C=0.284
Korean Genome Project KOREAN Study-wide 1832 T=0.8417 C=0.1583
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.775 C=0.225
Northern Sweden ACPOP Study-wide 600 T=0.717 C=0.283
Qatari Global Study-wide 216 T=0.829 C=0.171
A Vietnamese Genetic Variation Database Global Study-wide 214 T=0.841 C=0.159
SGDP_PRJ Global Study-wide 134 T=0.440 C=0.560
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 82 T=0.88 C=0.12
The Danish reference pan genome Danish Study-wide 40 T=0.68 C=0.33
Siberian Global Study-wide 12 T=0.42 C=0.58
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 19 NC_000019.10:g.36573130T>C
GRCh37.p13 chr 19 NC_000019.9:g.37064032T>C
Gene: ZNF529, zinc finger protein 529 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
ZNF529 transcript variant 1 NM_001145649.2:c.-46-738A…

NM_001145649.2:c.-46-738A>G

N/A Intron Variant
ZNF529 transcript variant 3 NM_001145650.2:c.-41+1648…

NM_001145650.2:c.-41+16485A>G

N/A Intron Variant
ZNF529 transcript variant 5 NM_001321351.2:c.-463+10A…

NM_001321351.2:c.-463+10A>G

N/A Intron Variant
ZNF529 transcript variant 6 NM_001352272.2:c.-586+10A…

NM_001352272.2:c.-586+10A>G

N/A Intron Variant
ZNF529 transcript variant 7 NM_001352273.2:c.-526+10A…

NM_001352273.2:c.-526+10A>G

N/A Intron Variant
ZNF529 transcript variant 2 NM_020951.5:c.-47+10A>G N/A Intron Variant
ZNF529 transcript variant 4 NR_027239.2:n. N/A Genic Downstream Transcript Variant
ZNF529 transcript variant X2 XM_011527164.4:c.-46-738A…

XM_011527164.4:c.-46-738A>G

N/A Intron Variant
ZNF529 transcript variant X3 XM_011527165.4:c.-41+10A>G N/A Intron Variant
ZNF529 transcript variant X1 XM_006723302.5:c.-134= N/A 5 Prime UTR Variant
ZNF529 transcript variant X4 XM_047439140.1:c. N/A Genic Upstream Transcript Variant
ZNF529 transcript variant X5 XM_047439141.1:c. N/A Genic Upstream Transcript Variant
Gene: ZNF529-AS1, ZNF529 antisense RNA 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
ZNF529-AS1 transcript variant 4 NR_110706.1:n.61T>C N/A Non Coding Transcript Variant
ZNF529-AS1 transcript variant 1 NR_110703.2:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 2 NR_110704.2:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 3 NR_110705.2:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 5 NR_173341.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 6 NR_173342.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 7 NR_173343.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 8 NR_173344.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 9 NR_173345.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 10 NR_173346.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 11 NR_173347.1:n. N/A Genic Upstream Transcript Variant
ZNF529-AS1 transcript variant 12 NR_173348.1:n. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= C
GRCh38.p14 chr 19 NC_000019.10:g.36573130= NC_000019.10:g.36573130T>C
GRCh37.p13 chr 19 NC_000019.9:g.37064032= NC_000019.9:g.37064032T>C
ZNF529 transcript variant X1 XM_006723302.5:c.-134= XM_006723302.5:c.-134A>G
ZNF529-AS1 transcript variant 4 NR_110706.1:n.61= NR_110706.1:n.61T>C
ZNF529-AS1 transcript variant 3 NR_110705.1:n.61= NR_110705.1:n.61T>C
ZNF529-AS1 transcript variant 2 NR_110704.1:n.61= NR_110704.1:n.61T>C
ZNF529-AS1 transcript variant 1 NR_110703.1:n.61= NR_110703.1:n.61T>C
ZNF529 transcript variant 1 NM_001145649.1:c.-46-738= NM_001145649.1:c.-46-738A>G
ZNF529 transcript variant 1 NM_001145649.2:c.-46-738= NM_001145649.2:c.-46-738A>G
ZNF529 transcript variant 3 NM_001145650.1:c.-41+16485= NM_001145650.1:c.-41+16485A>G
ZNF529 transcript variant 3 NM_001145650.2:c.-41+16485= NM_001145650.2:c.-41+16485A>G
ZNF529 transcript variant 5 NM_001321351.2:c.-463+10= NM_001321351.2:c.-463+10A>G
ZNF529 transcript variant 6 NM_001352272.2:c.-586+10= NM_001352272.2:c.-586+10A>G
ZNF529 transcript variant 7 NM_001352273.2:c.-526+10= NM_001352273.2:c.-526+10A>G
ZNF529 transcript variant 2 NM_020951.4:c.-47+10= NM_020951.4:c.-47+10A>G
ZNF529 transcript variant 2 NM_020951.5:c.-47+10= NM_020951.5:c.-47+10A>G
ZNF529 transcript variant X2 XM_011527164.4:c.-46-738= XM_011527164.4:c.-46-738A>G
ZNF529 transcript variant X3 XM_011527165.4:c.-41+10= XM_011527165.4:c.-41+10A>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

117 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 YUSUKE ss4931799 Aug 28, 2002 (107)
2 BCM_SSAHASNP ss10937605 Jul 11, 2003 (116)
3 PERLEGEN ss24225567 Sep 20, 2004 (123)
4 ILLUMINA ss66585115 Nov 30, 2006 (127)
5 ILLUMINA ss67298994 Nov 30, 2006 (127)
6 ILLUMINA ss67703615 Nov 30, 2006 (127)
7 PERLEGEN ss69227961 May 17, 2007 (127)
8 ILLUMINA ss70777625 May 23, 2008 (130)
9 ILLUMINA ss71353785 May 17, 2007 (127)
10 ILLUMINA ss74912886 Dec 07, 2007 (129)
11 AFFY ss76692575 Dec 07, 2007 (129)
12 HGSV ss78308964 Dec 07, 2007 (129)
13 ILLUMINA ss79164357 Dec 14, 2007 (130)
14 KRIBB_YJKIM ss84166032 Dec 14, 2007 (130)
15 BCMHGSC_JDW ss90966005 Mar 24, 2008 (129)
16 1000GENOMES ss111352122 Jan 25, 2009 (130)
17 ILLUMINA ss122205919 Dec 01, 2009 (131)
18 ENSEMBL ss137664450 Dec 01, 2009 (131)
19 ILLUMINA ss154264823 Dec 01, 2009 (131)
20 ILLUMINA ss159441659 Dec 01, 2009 (131)
21 ILLUMINA ss160635315 Dec 01, 2009 (131)
22 ILLUMINA ss171623629 Jul 04, 2010 (132)
23 ILLUMINA ss173620719 Jul 04, 2010 (132)
24 BUSHMAN ss203747131 Jul 04, 2010 (132)
25 BCM-HGSC-SUB ss208458146 Jul 04, 2010 (132)
26 1000GENOMES ss228130633 Jul 14, 2010 (132)
27 1000GENOMES ss237670416 Jul 15, 2010 (132)
28 1000GENOMES ss243877477 Jul 15, 2010 (132)
29 BL ss255660245 May 09, 2011 (134)
30 GMI ss283201256 May 04, 2012 (137)
31 GMI ss287380008 Apr 25, 2013 (138)
32 PJP ss292246518 May 09, 2011 (134)
33 ILLUMINA ss480811903 May 04, 2012 (137)
34 ILLUMINA ss480827514 May 04, 2012 (137)
35 ILLUMINA ss481756076 Sep 08, 2015 (146)
36 ILLUMINA ss485200741 May 04, 2012 (137)
37 ILLUMINA ss537187334 Sep 08, 2015 (146)
38 TISHKOFF ss565969735 Apr 25, 2013 (138)
39 SSMP ss661832125 Apr 25, 2013 (138)
40 ILLUMINA ss778521902 Aug 21, 2014 (142)
41 ILLUMINA ss783046369 Sep 08, 2015 (146)
42 ILLUMINA ss784005216 Aug 21, 2014 (142)
43 ILLUMINA ss825494875 Apr 01, 2015 (144)
44 ILLUMINA ss832304157 Sep 08, 2015 (146)
45 ILLUMINA ss832953230 Jul 13, 2019 (153)
46 ILLUMINA ss833978320 Aug 21, 2014 (142)
47 EVA-GONL ss994277105 Aug 21, 2014 (142)
48 JMKIDD_LAB ss1081888996 Aug 21, 2014 (142)
49 1000GENOMES ss1363078015 Aug 21, 2014 (142)
50 DDI ss1428397326 Apr 01, 2015 (144)
51 EVA_GENOME_DK ss1578631942 Apr 01, 2015 (144)
52 EVA_UK10K_ALSPAC ss1637926134 Apr 01, 2015 (144)
53 EVA_UK10K_TWINSUK ss1680920167 Apr 01, 2015 (144)
54 EVA_DECODE ss1698330761 Apr 01, 2015 (144)
55 EVA_SVP ss1713661362 Apr 01, 2015 (144)
56 ILLUMINA ss1752283396 Sep 08, 2015 (146)
57 WEILL_CORNELL_DGM ss1937771214 Feb 12, 2016 (147)
58 GENOMED ss1968639793 Jul 19, 2016 (147)
59 JJLAB ss2029663671 Sep 14, 2016 (149)
60 USC_VALOUEV ss2158202772 Dec 20, 2016 (150)
61 HUMAN_LONGEVITY ss2225594133 Dec 20, 2016 (150)
62 SYSTEMSBIOZJU ss2629329188 Nov 08, 2017 (151)
63 ILLUMINA ss2633537678 Nov 08, 2017 (151)
64 GRF ss2702811803 Nov 08, 2017 (151)
65 GNOMAD ss2962602642 Nov 08, 2017 (151)
66 SWEGEN ss3017432529 Nov 08, 2017 (151)
67 CSHL ss3352292932 Nov 08, 2017 (151)
68 ILLUMINA ss3627927324 Oct 12, 2018 (152)
69 ILLUMINA ss3631509292 Oct 12, 2018 (152)
70 ILLUMINA ss3633179702 Oct 12, 2018 (152)
71 ILLUMINA ss3633890039 Oct 12, 2018 (152)
72 ILLUMINA ss3634733870 Oct 12, 2018 (152)
73 ILLUMINA ss3635576853 Oct 12, 2018 (152)
74 ILLUMINA ss3636421729 Oct 12, 2018 (152)
75 ILLUMINA ss3637328589 Oct 12, 2018 (152)
76 ILLUMINA ss3638225833 Oct 12, 2018 (152)
77 ILLUMINA ss3639119424 Oct 12, 2018 (152)
78 ILLUMINA ss3639570247 Oct 12, 2018 (152)
79 ILLUMINA ss3640441178 Oct 12, 2018 (152)
80 ILLUMINA ss3643198899 Oct 12, 2018 (152)
81 EGCUT_WGS ss3684205734 Jul 13, 2019 (153)
82 EVA_DECODE ss3702723134 Jul 13, 2019 (153)
83 ACPOP ss3743019343 Jul 13, 2019 (153)
84 ILLUMINA ss3745033888 Jul 13, 2019 (153)
85 EVA ss3756038073 Jul 13, 2019 (153)
86 ILLUMINA ss3772531036 Jul 13, 2019 (153)
87 PACBIO ss3788524323 Jul 13, 2019 (153)
88 PACBIO ss3793436152 Jul 13, 2019 (153)
89 PACBIO ss3798322911 Jul 13, 2019 (153)
90 KHV_HUMAN_GENOMES ss3821285539 Jul 13, 2019 (153)
91 EVA ss3835451429 Apr 27, 2020 (154)
92 EVA ss3841348048 Apr 27, 2020 (154)
93 EVA ss3846853811 Apr 27, 2020 (154)
94 HGDP ss3847599089 Apr 27, 2020 (154)
95 SGDP_PRJ ss3888169442 Apr 27, 2020 (154)
96 KRGDB ss3938268313 Apr 27, 2020 (154)
97 KOGIC ss3981295020 Apr 27, 2020 (154)
98 FSA-LAB ss3984152716 Apr 26, 2021 (155)
99 EVA ss3985853802 Apr 26, 2021 (155)
100 EVA ss3986080542 Apr 26, 2021 (155)
101 EVA ss4017823664 Apr 26, 2021 (155)
102 TOPMED ss5074069994 Apr 26, 2021 (155)
103 TOMMO_GENOMICS ss5227643930 Apr 26, 2021 (155)
104 1000G_HIGH_COVERAGE ss5307166935 Oct 16, 2022 (156)
105 EVA ss5315973469 Oct 16, 2022 (156)
106 EVA ss5434703731 Oct 16, 2022 (156)
107 HUGCELL_USP ss5499703198 Oct 16, 2022 (156)
108 EVA ss5512095148 Oct 16, 2022 (156)
109 1000G_HIGH_COVERAGE ss5612861706 Oct 16, 2022 (156)
110 SANFORD_IMAGENETICS ss5662347503 Oct 16, 2022 (156)
111 TOMMO_GENOMICS ss5786239803 Oct 16, 2022 (156)
112 EVA ss5800008305 Oct 16, 2022 (156)
113 YY_MCH ss5817580459 Oct 16, 2022 (156)
114 EVA ss5840518896 Oct 16, 2022 (156)
115 EVA ss5852280974 Oct 16, 2022 (156)
116 EVA ss5928018054 Oct 16, 2022 (156)
117 EVA ss5953762948 Oct 16, 2022 (156)
118 1000Genomes NC_000019.9 - 37064032 Oct 12, 2018 (152)
119 1000Genomes_30x NC_000019.10 - 36573130 Oct 16, 2022 (156)
120 The Avon Longitudinal Study of Parents and Children NC_000019.9 - 37064032 Oct 12, 2018 (152)
121 Genetic variation in the Estonian population NC_000019.9 - 37064032 Oct 12, 2018 (152)
122 The Danish reference pan genome NC_000019.9 - 37064032 Apr 27, 2020 (154)
123 gnomAD - Genomes NC_000019.10 - 36573130 Apr 26, 2021 (155)
124 Genome of the Netherlands Release 5 NC_000019.9 - 37064032 Apr 27, 2020 (154)
125 HGDP-CEPH-db Supplement 1 NC_000019.8 - 41755872 Apr 27, 2020 (154)
126 HapMap NC_000019.10 - 36573130 Apr 27, 2020 (154)
127 KOREAN population from KRGDB NC_000019.9 - 37064032 Apr 27, 2020 (154)
128 Korean Genome Project NC_000019.10 - 36573130 Apr 27, 2020 (154)
129 Northern Sweden NC_000019.9 - 37064032 Jul 13, 2019 (153)
130 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000019.9 - 37064032 Apr 26, 2021 (155)
131 Qatari NC_000019.9 - 37064032 Apr 27, 2020 (154)
132 SGDP_PRJ NC_000019.9 - 37064032 Apr 27, 2020 (154)
133 Siberian NC_000019.9 - 37064032 Apr 27, 2020 (154)
134 8.3KJPN NC_000019.9 - 37064032 Apr 26, 2021 (155)
135 14KJPN NC_000019.10 - 36573130 Oct 16, 2022 (156)
136 TopMed NC_000019.10 - 36573130 Apr 26, 2021 (155)
137 UK 10K study - Twins NC_000019.9 - 37064032 Oct 12, 2018 (152)
138 A Vietnamese Genetic Variation Database NC_000019.9 - 37064032 Jul 13, 2019 (153)
139 ALFA NC_000019.10 - 36573130 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17238991 Oct 08, 2004 (123)
rs57127097 May 23, 2008 (130)
rs386585327 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
276981, ss76692575, ss78308964, ss90966005, ss111352122, ss160635315, ss203747131, ss208458146, ss255660245, ss283201256, ss287380008, ss292246518, ss480811903, ss825494875, ss1698330761, ss1713661362, ss3639119424, ss3639570247, ss3643198899, ss3847599089 NC_000019.8:41755871:T:C NC_000019.10:36573129:T:C (self)
76481894, 42362856, 29943982, 4814747, 18872161, 45445707, 16304208, 1079729, 19813136, 40186422, 10719126, 85613237, 42362856, 9357960, ss228130633, ss237670416, ss243877477, ss480827514, ss481756076, ss485200741, ss537187334, ss565969735, ss661832125, ss778521902, ss783046369, ss784005216, ss832304157, ss832953230, ss833978320, ss994277105, ss1081888996, ss1363078015, ss1428397326, ss1578631942, ss1637926134, ss1680920167, ss1752283396, ss1937771214, ss1968639793, ss2029663671, ss2158202772, ss2629329188, ss2633537678, ss2702811803, ss2962602642, ss3017432529, ss3352292932, ss3627927324, ss3631509292, ss3633179702, ss3633890039, ss3634733870, ss3635576853, ss3636421729, ss3637328589, ss3638225833, ss3640441178, ss3684205734, ss3743019343, ss3745033888, ss3756038073, ss3772531036, ss3788524323, ss3793436152, ss3798322911, ss3835451429, ss3841348048, ss3888169442, ss3938268313, ss3984152716, ss3985853802, ss3986080542, ss4017823664, ss5227643930, ss5315973469, ss5434703731, ss5512095148, ss5662347503, ss5800008305, ss5840518896, ss5953762948 NC_000019.9:37064031:T:C NC_000019.10:36573129:T:C (self)
100387641, 539393412, 1693044, 37673021, 120076907, 289615658, 10137427541, ss2225594133, ss3702723134, ss3821285539, ss3846853811, ss3981295020, ss5074069994, ss5307166935, ss5499703198, ss5612861706, ss5786239803, ss5817580459, ss5852280974, ss5928018054 NC_000019.10:36573129:T:C NC_000019.10:36573129:T:C (self)
ss10937605 NT_011109.15:9332249:T:C NC_000019.10:36573129:T:C (self)
ss4931799, ss24225567, ss66585115, ss67298994, ss67703615, ss69227961, ss70777625, ss71353785, ss74912886, ss79164357, ss84166032, ss122205919, ss137664450, ss154264823, ss159441659, ss171623629, ss173620719 NT_011109.16:9332249:T:C NC_000019.10:36573129:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3745779

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07