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Reference SNP (refSNP) Cluster Report: rs3133926                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:103/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitWith1000GenomeData
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/G (FWD)
Allele Origin:
Ancestral Allele:G
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:G=0.3229/1617 (1000 Genomes)
G=0.2847/35752 (TOPMED)
HGVS Names
  • CM000670.2:g.109677149A>G
  • NC_000008.10:g.110689378A>G
  • NC_000008.11:g.109677149A>G
  • NM_001099743.1:c.-58+14184T>C
  • NM_001099744.1:c.-58+14184T>C
  • NM_001099745.1:c.-58+3562T>C
  • NM_001099746.1:c.-129+3562T>C
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss279956850 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs3133926 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss4381774SC_JCM|AP004281.1_18590fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca02/19/0210/10/03103Genomicunknown
ss11964259WI_SSAHASNP|chr8.NT_008046.13_23907551fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca07/04/0310/25/06116Genomicunknown
ss22726508SSAHASNP|WGSA-200403-chr8.chr8.NT_008046.14_23907551fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca03/21/0403/21/04121Genomicunknown
ss24199190PERLEGEN|afd4617401byFreqfwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca08/10/0409/13/04123Genomicunknown
ss44881104ABI|hCV31091540byFreqfwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca07/19/0511/03/06126Genomicunknown
ss66584526ILLUMINA|HumanHap300v1.1_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca11/09/0611/09/06127Genomicunknown
ss67291669ILLUMINA|HumanHap550v1.1_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca11/14/0611/14/06127Genomicunknown
ss67695314ILLUMINA|HumanHap650Yv1.0_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca11/14/0611/14/06127Genomicunknown
ss70770256ILLUMINA|HumanHap550v3.0__rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca04/20/0703/30/08130Genomicunknown
ss71345444ILLUMINA|HumanHap650Yv3.0_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca04/23/0704/23/07127Genomicunknown
ss74930764ILLUMINA|ILMN_Human_1M_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca08/28/0708/29/07129Genomicunknown
ss79159252ILLUMINA|HumanHap300v2.0_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca04/18/0711/18/07130Genomicunknown
ss82483008HGSV|Cor18956_SNV_20070510.chr8_110758554fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca11/30/0712/02/07130Genomicunknown
ss84154925KRIBB_YJKIM|KHS646789fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca12/04/0712/06/07130Genomicunknown
ss93947691BCMHGSC_JDW|JWB-2509805fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca02/26/0803/05/08129Genomicunknown
ss97894615HUMANGENOME_JCVI|1103652411214fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca03/30/0803/30/08130Genomicunknown
ss105638458BGI|BGI_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca09/10/0806/18/09130Genomicunknown
ss1135662591000GENOMES|NA19240_2008_12_16_1859041_chr8_110758554fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca12/18/0812/18/08130Genomicunknown
ss116124679ILLUMINA-UK|NA18507_000152399_NCBI36.1_chr8_110758554fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca01/16/0901/17/09130Genomic99 %
ss122175616ILLUMINA|HumanCNV370v1_C_rs3133926fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca04/14/0904/15/09131Genomicunknown
ss139380641ENSEMBL|ENSSNP3346560fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca12/08/0810/19/09131Genomicunknown
ss143708407ENSEMBL|ENSSNP5836768fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca06/05/0906/06/09131Genomicunknown
ss154255590ILLUMINA|Human610_Quadv1_B_rs3133926-128_T_F_1501752575fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca06/18/0906/20/09131Genomicunknown
ss159432215ILLUMINA|Human660W-Quad_v1_A_rs3133926-128_T_F_1501752575fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca07/06/0907/07/09131Genomicunknown
ss160613983ILLUMINA|HumanOmni1-Quad_v1-0_B_rs3133926-128_T_F_1501752575fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca08/04/0910/04/09131Genomicunknown
ss165504402COMPLETE_GENOMICS|NA19240_36_chr8_110758554fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca09/29/0909/30/09132Genomicunknown
ss167002017COMPLETE_GENOMICS|NA20431_36_chr8_110758554fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca09/30/0909/30/09132Genomicunknown
ss171551828ILLUMINA|HumanCNV370-Quadv3_C_rs3133926-128_T_F_1501752575fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca10/01/0910/04/09132Genomicunknown
ss173568798ILLUMINA|Human1M-Duov3_B_rs3133926-128_T_F_1501752575fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca10/01/0910/04/09132Genomicunknown
ss199622427BUSHMAN|BUSHMAN-chr8-110758553fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca02/16/1003/06/10132Genomicunknown
ss2239100001000GENOMES|pilot_1_YRI_5719683_chr8_110758554fwd/A/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca04/22/1004/22/10132Genomicunknown
ss2345815101000GENOMES|pilot_1_CEU_4186139_chr8_110758554fwd/A/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca05/01/1005/01/10132Genomicunknown
ss2414048291000GENOMES|pilot_1_CHB+JPT_3289906_chr8_110758554fwd/A/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca05/01/1005/01/10132Genomicunknown
ss254572201BL|SNP120103_8_110758554fwd/TA/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca08/19/1008/19/10134Genomicunknown
ss279956850GMI|GMI_AK_SNP_4277121fwd/A/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca12/16/1012/16/10137Genomicunknown
ss285904276GMI|GMI_NA10851_SNP_1917049fwd/A/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca12/17/1012/17/10138Genomicunknown
ss294162059PJP|SNP_3668417_chr8_110758554fwd/A/Ggttatgcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataagtgaca01/21/1101/21/11134Genomicunknown
ss480761606ILLUMINA|HumanOmni2.5-4v1_B_rs3133926-128_T_F_1771832205fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag01/30/1210/29/16137Genomicunknown
ss480777416ILLUMINA|HumanOmniExpress-12v1_C_rs3133926-131_T_F_1857422050fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag01/30/1210/27/16137Genomicunknown
ss481670262ILLUMINA|HumanOmni1-Quad_v1-0_C_rs3133926-131_T_F_1865346156fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag01/30/1208/28/15146Genomicunknown
ss485175518ILLUMINA|HumanOmni2.5-4v1_D_rs3133926-131_T_F_1857422050fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag01/30/1210/28/16137Genomicunknown
ss537165363ILLUMINA|HumanOmni5-4v1_B_rs3133926-131_T_F_1894823260fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag06/22/1208/29/15146Genomicunknown
ss560989937TISHKOFF|snp_chr8_110689378fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag11/22/1211/23/12138Genomicunknown
ss655428164SSMP|8_110689378fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag12/14/1202/12/15138Genomicunknown
ss778889176ILLUMINA|HumanOmni25Exome-8v1_A_rs3133926-131_T_F_1865346156fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag05/30/1307/10/15142Genomicunknown
ss783033940ILLUMINA|HumanOmni2.5-4v1_H_rs3133926-131_T_F_1857422050fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag05/30/1307/29/15142Genomicunknown
ss783993544ILLUMINA|HumanOmniExpressExome-8v1_A_rs3133926-131_T_F_1894823260fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag05/31/1306/19/15142Genomicunknown
ss825489770ILLUMINA|HumanCNV370v1_C_rs3133926-126_T_F_IFB1135171423:0fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag06/24/1311/21/14147Genomicunknown
ss832291584ILLUMINA|HumanOmniExpress-12v1_H_rs3133926-131_T_F_1857422050fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag09/17/1306/19/15144Genomicunknown
ss832943815ILLUMINA|Human660W-Quad_v1_C_rs3133926-131_T_F_1857422050fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag09/18/1307/02/15142Genomicunknown
ss833534645ILLUMINA|Human660W-Quad_v1_H_rs3133926-131_T_F_1857422050fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag09/18/1307/02/15142Genomicunknown
ss834350269ILLUMINA|HumanOmni2.5-8v1_A_rs3133926-131_T_F_1865346156fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag09/18/1307/29/15142Genomicunknown
ss985925180EVA-GONL|EVA-GONL_rs3133926fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag04/23/1404/25/14142Genomicunknown
ss1075819320JMKIDD_LAB|HGDP_WGS_chr8_110689378fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag07/10/1407/11/14142Genomicunknown
ss13314175841000GENOMES|PHASE3_V1_43830189fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag08/16/1408/16/14142Genomicunknown
ss1431631264DDI|DDI_rs3133926fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag11/04/1411/05/14144Genomicunknown
ss1582836967EVA_GENOME_DK|EVA_GENOME_DK_snv_rs3133926fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag02/19/1502/20/15144Genomicunknown
ss1595538346EVA_DECODE|EVA_DECODE_8_110758554_917069_rs3133926fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag03/02/1503/03/15144Genomicunknown
ss1621464059EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_8_110689378_24252670fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag03/04/1503/04/15144Genomicunknown
ss1664458092EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_8_110689378_24252670fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag03/04/1503/04/15144Genomicunknown
ss1713062309EVA_SVP|EVA_SVP_756676fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag03/12/1503/12/15144Genomicunknown
ss1752706779ILLUMINA|OmniExpressExome-8v1-1_B_rs3133926-131_T_F_1894823260fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag05/27/1506/09/15146Genomicunknown
ss1805703361HAMMER_LAB|Hsieh_4718574fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag07/15/1507/16/15146Genomicunknown
ss1929203014WEILL_CORNELL_DGM|SNV:chr8:110689378fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag10/16/1510/17/15147Genomicunknown
ss1946244411ILLUMINA|HumanCoreExome-12v1-0_C_rs3133926-131_T_F_1894823260fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag10/29/1510/29/15147Genomicunknown
ss1959135074ILLUMINA|rs3133926-131_T_F_1894823260fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag11/13/1511/13/15147Genomicunknown
ss1971065322GENOMED|rs3133926fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag02/16/1602/16/16147Genomicunknown
ss2025305589JJLAB|SNP5808144fwd/TA/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag08/29/1608/30/16149Genomicunknown
ss2153533386USC_VALOUEV|NC_000008.10:g.110689378A>Gfwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag11/17/1611/17/16150Genomicunknown
ss2306332258HUMAN_LONGEVITY|HLI-8-109677149-A-Gfwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag11/18/1611/18/16150Genomicunknown
ss2476301714TOPMED|8_110689378_A/Gfwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag11/20/1611/20/16150Genomicunknown
ss2627127199SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV3696750fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag01/06/1701/06/17151Genomicunknown
ss2634789475ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs3133926-131_T_F_18948232fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag02/02/1702/02/17151Genomicunknown
ss2709314325GRF|rs3133926fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag02/13/1702/13/17151Genomicunknown
ss2711145702ILLUMINA|Consortium-OncoArray_15047405_A_rs3133926-131_T_F_1894823260fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag03/22/1703/22/17151Genomicunknown
ss2871288667GNOMAD|rs3133926fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag05/19/1705/19/17151Genomicunknown
ss3003803624SWEGEN|NC_000008.10:g.110689378A>Gfwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag05/30/1705/30/17151Genomicunknown
ss3022873568ILLUMINA|MEGA_Consortium_v2_15070954_A2_rs3133926-138_T_F_2276554031fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag06/28/1706/28/17151Genomicunknown
ss3026438076BIOINF_KMB_FNS_UNIBA|8.109677149A>Gfwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag07/05/1707/05/17151Genomicunknown
ss3348351405CSHL|rs3133926fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag10/02/1710/02/17151Genomicunknown
ss3572544105TOPMED|TOPMed_freeze_5?chr8:109,677,149fwd/A/Ggcacatgggttaagatttgtgagagcctttaaagaacttgtgccaataag10/06/1710/06/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs3133926|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=151
 TCCAATTTCA CAGTATAGCA TCAGGTTTCT TGTATACAAA TATAAATGAT TGAGAATTCA
 ACTGGAATAG AAAAAGTATT AGAAATTTCT GGATTGAGAT TCAGAGTCTG ATGTCCAGAA
 GTTGTATGAT TAAAAATGAC TTAAATATTG TCTTCAGAAA TTGAGCTATG GACATGGCAC
 CCAAGAGGGA ATGGGATTCT CTGCATAATG AAGAACATGT CACTTTGGTA TTTATTGGAT
 TGCTTTGGCA GTAGTCAGTT GTGATCAACA TTTATGTTGG TTAAGATCTT GGAATATATG
 TTGTGGAAAA ATCTCTCACT CGCTCTTTGT CTTTTTGTCT CTGAGTCTCC ATTTCTCTCT
 CTTTTCTCTG TCTTTCAGGG TGTTCATGTG TGTGTGTGTG TGTGTGTGAA GGAAGATATA
 GGAAAAAAAG AGCTAGAAAT CTGTAGTTGG TTTGTTGGAT AGAGGCGAGT GTTATGCACA
 TGGGTTAAGA TTTGTGAGAG
 R
 CCTTTAAAGA ACTTGTGCCA ATAAGTGACA ATAGTCATTT ACAAAACTGA AAAAAAATGT
 AAGATACTCT AAAAGTAATA CATACAAGTT AACCCCTGGT ACCTTTTCAA TTAAAAAATA
 TGAACACACA CAAATAATTT GAAATGCATT CTGTGGTATA TTTTCCAATG ACCAAAATAA
 GGACATATTT TAGTTATTTC TTTTCTTTAA CAATTAGACA AATTAATAAA CTTCACATTT
 TCTGCATGAC TTTTTAATGA CTTTGAATTT CTTCAATTAT TTGAAGTAAA TTGCAAAAAA
 ATACACCTCA TGTTCCAGGC AAAGGTTTGA ATTAATCCTC TTTGAAAAAC AACAGATGAA
 CCATCATAAT ATATGGGAAA TAATAGTTTT TCTCTACTCA TTGCCTTAAG GTTAACTTGA
 GACACTTTAA TGTTAAAATT AATAAGCTGA GGAAGGAAGG TGAAAACTAA CATATTAAAT
 ACCCACTGTA TGTGAGGCAC

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_008046 ABBA01037715 AC079061 AP004292
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA/A
A/G
G/G
HWPA
G
ss116124679YRI 2IG 1.00000000 0.500000000.50000000
ss1331417584EAS 1008AF 0.481199980.51879996
EUR 1006AF 0.778299990.22170000
AFR 1322AF 0.633099970.36690000
AMR 694AF 0.760799940.23920001
SAS 978AF 0.775099990.22489999
ss139380641ENSEMBL_Venter 2IG 1.00000000 1.00000000
ss143708407ENSEMBL_Watson 2IG 1.00000000 0.500000000.50000000
ss165504402YRISub-Saharan African 2IG 1.00000000 0.500000000.50000000
ss167002017PGP 2IG 1.00000000 0.500000000.50000000
ss199622427BUSHMAN_POP2 2IG 1.00000000 0.500000000.50000000
ss223910000pilot_1_YRI_low_coverage_panel 118AF 0.635593240.36440679
ss234581510pilot_1_CEU_low_coverage_panel 120AF 0.808333340.19166666
ss241404829pilot_1_CHB+JPT_low_coverage_panel 120AF 0.516666650.48333332
ss24199190AFD_EUR_PANELEuropean 48IG0.541666690.375000000.083333341.000000000.729166690.27083334
AFD_AFR_PANELAfrican American 46IG0.304347810.69565219 0.099721000.652173940.34782609
AFD_CHN_PANELAsian 48IG0.166666670.625000000.208333330.250592000.479166660.52083331
ss44881104HapMap-CEUEuropean 224IG0.616071400.330357130.053571430.751830000.781250000.21875000
HapMap-HCBAsian 86IG0.209302320.581395330.209302320.294266000.500000000.50000000
HapMap-JPTAsian 170IG0.305882360.482352940.211764711.000000000.547058820.45294118
HapMap-YRISub-Saharan African 224IG0.339285700.589285730.071428570.004998000.633928600.36607143
HAPMAP-ASW 98IG0.408163280.510204080.081632650.342782000.663265290.33673468
HAPMAP-CHBAsian 80IG0.224999990.524999980.250000000.751830000.487500010.51249999
HAPMAP-CHD 170IG0.305882360.505882380.188235301.000000000.558823530.44117647
HAPMAP-GIH 176IG0.693181810.250000000.056818180.150222000.818181810.18181819
HAPMAP-LWK 180IG0.455555560.422222230.122222220.654721000.666666690.33333334
HAPMAP-MEX 100IG0.579999980.400000010.020000000.250592000.779999970.22000000
HAPMAP-MKK 286IG0.503496530.405594410.090909091.000000000.706293700.29370630
HAPMAP-TSI 176IG0.568181810.352272720.079545450.527089000.744318190.25568181
ss97894615J. Craig Venter 2IG 1.00000000 1.00000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.437+/-0.1660000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNPNCBI
UNKNOWNUNKNOWNUNKNOWN

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