Name: rs3108598
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3108598

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:36577333 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>C
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.207666 (54967/264690, TOPMED)
C=0.236134 (51558/218342, ALFA)
C=0.211570 (29599/139902, GnomAD) (+ 20 more)
C=0.18632 (5265/28258, 14KJPN)
C=0.18556 (3110/16760, 8.3KJPN)
C=0.2288 (1465/6404, 1000G_30x)
C=0.2308 (1156/5008, 1000G)
C=0.2134 (956/4480, Estonian)
C=0.2366 (912/3854, ALSPAC)
C=0.2465 (914/3708, TWINSUK)
C=0.1694 (495/2922, KOREAN)
C=0.2059 (429/2084, HGDP_Stanford)
C=0.2072 (392/1892, HapMap)
C=0.1861 (341/1832, Korea1K)
C=0.241 (241/998, GoNL)
C=0.225 (135/600, NorthernSweden)
C=0.169 (90/534, MGP)
T=0.427 (94/220, SGDP_PRJ)
C=0.213 (46/216, Qatari)
C=0.171 (36/210, Vietnamese)
C=0.44 (34/78, Ancient Sardinia)
C=0.17 (7/40, GENOME_DK)
T=0.38 (6/16, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZNF529-AS1 : Non Coding Transcript Variant
ZNF529 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	218342	T=0.763866	C=0.236134
European	Sub	190870	T=0.759889	C=0.240111
African	Sub	7064	T=0.8310	C=0.1690
African Others	Sub	264	T=0.822	C=0.178
African American	Sub	6800	T=0.8313	C=0.1687
Asian	Sub	744	T=0.812	C=0.188
East Asian	Sub	598	T=0.809	C=0.191
Other Asian	Sub	146	T=0.822	C=0.178
Latin American 1	Sub	840	T=0.798	C=0.202
Latin American 2	Sub	6888	T=0.8474	C=0.1526
South Asian	Sub	5040	T=0.6784	C=0.3216
Other	Sub	6896	T=0.7749	C=0.2251

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.792334	C=0.207666
Allele Frequency Aggregator	Total	Global	218342	T=0.763866	C=0.236134
Allele Frequency Aggregator	European	Sub	190870	T=0.759889	C=0.240111
Allele Frequency Aggregator	African	Sub	7064	T=0.8310	C=0.1690
Allele Frequency Aggregator	Other	Sub	6896	T=0.7749	C=0.2251
Allele Frequency Aggregator	Latin American 2	Sub	6888	T=0.8474	C=0.1526
Allele Frequency Aggregator	South Asian	Sub	5040	T=0.6784	C=0.3216
Allele Frequency Aggregator	Latin American 1	Sub	840	T=0.798	C=0.202
Allele Frequency Aggregator	Asian	Sub	744	T=0.812	C=0.188
gnomAD - Genomes	Global	Study-wide	139902	T=0.788430	C=0.211570
gnomAD - Genomes	European	Sub	75798	T=0.76650	C=0.23350
gnomAD - Genomes	African	Sub	41914	T=0.82662	C=0.17338
gnomAD - Genomes	American	Sub	13606	T=0.79597	C=0.20403
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.7408	C=0.2592
gnomAD - Genomes	East Asian	Sub	3124	T=0.8249	C=0.1751
gnomAD - Genomes	Other	Sub	2138	T=0.7900	C=0.2100
14KJPN	JAPANESE	Study-wide	28258	T=0.81368	C=0.18632
8.3KJPN	JAPANESE	Study-wide	16760	T=0.81444	C=0.18556
1000Genomes_30x	Global	Study-wide	6404	T=0.7712	C=0.2288
1000Genomes_30x	African	Sub	1786	T=0.8315	C=0.1685
1000Genomes_30x	Europe	Sub	1266	T=0.7354	C=0.2646
1000Genomes_30x	South Asian	Sub	1202	T=0.6148	C=0.3852
1000Genomes_30x	East Asian	Sub	1170	T=0.8308	C=0.1692
1000Genomes_30x	American	Sub	980	T=0.829	C=0.171
1000Genomes	Global	Study-wide	5008	T=0.7692	C=0.2308
1000Genomes	African	Sub	1322	T=0.8313	C=0.1687
1000Genomes	East Asian	Sub	1008	T=0.8214	C=0.1786
1000Genomes	Europe	Sub	1006	T=0.7306	C=0.2694
1000Genomes	South Asian	Sub	978	T=0.630	C=0.370
1000Genomes	American	Sub	694	T=0.827	C=0.173
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.7866	C=0.2134
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.7634	C=0.2366
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.7535	C=0.2465
KOREAN population from KRGDB	KOREAN	Study-wide	2922	T=0.8306	C=0.1694
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	T=0.7941	C=0.2059
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	T=0.789	C=0.211
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	T=0.708	C=0.292
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	T=0.794	C=0.206
HGDP-CEPH-db Supplement 1	Europe	Sub	320	T=0.784	C=0.216
HGDP-CEPH-db Supplement 1	Africa	Sub	242	T=0.855	C=0.145
HGDP-CEPH-db Supplement 1	America	Sub	216	T=0.940	C=0.060
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	T=0.72	C=0.28
HapMap	Global	Study-wide	1892	T=0.7928	C=0.2072
HapMap	American	Sub	770	T=0.749	C=0.251
HapMap	African	Sub	692	T=0.840	C=0.160
HapMap	Asian	Sub	254	T=0.827	C=0.173
HapMap	Europe	Sub	176	T=0.750	C=0.250
Korean Genome Project	KOREAN	Study-wide	1832	T=0.8139	C=0.1861
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.759	C=0.241
Northern Sweden	ACPOP	Study-wide	600	T=0.775	C=0.225
Medical Genome Project healthy controls from Spanish population	Spanish controls	Study-wide	534	T=0.831	C=0.169
SGDP_PRJ	Global	Study-wide	220	T=0.427	C=0.573
Qatari	Global	Study-wide	216	T=0.787	C=0.213
A Vietnamese Genetic Variation Database	Global	Study-wide	210	T=0.829	C=0.171
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	78	T=0.56	C=0.44
The Danish reference pan genome	Danish	Study-wide	40	T=0.82	C=0.17
Siberian	Global	Study-wide	16	T=0.38	C=0.62

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.36577333T>C
GRCh37.p13 chr 19	NC_000019.9:g.37068235T>C

Gene: ZNF529, zinc finger protein 529 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF529 transcript variant 1	NM_001145649.2:c.-46-4941… NM_001145649.2:c.-46-4941A>G	N/A	Intron Variant
ZNF529 transcript variant 3	NM_001145650.2:c.-41+1228… NM_001145650.2:c.-41+12282A>G	N/A	Intron Variant
ZNF529 transcript variant 5	NM_001321351.2:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant 6	NM_001352272.2:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant 7	NM_001352273.2:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant 2	NM_020951.5:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant 4	NR_027239.2:n.	N/A	Genic Downstream Transcript Variant
ZNF529 transcript variant X2	XM_011527164.4:c.-46-4941… XM_011527164.4:c.-46-4941A>G	N/A	Intron Variant
ZNF529 transcript variant X1	XM_006723302.5:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant X3	XM_011527165.4:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant X4	XM_047439140.1:c.	N/A	Genic Upstream Transcript Variant
ZNF529 transcript variant X5	XM_047439141.1:c.	N/A	Genic Upstream Transcript Variant

Gene: ZNF529-AS1, ZNF529 antisense RNA 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF529-AS1 transcript variant 4	NR_110706.1:n.729T>C	N/A	Non Coding Transcript Variant
ZNF529-AS1 transcript variant 6	NR_173342.1:n.566T>C	N/A	Non Coding Transcript Variant
ZNF529-AS1 transcript variant 7	NR_173343.1:n.450T>C	N/A	Non Coding Transcript Variant
ZNF529-AS1 transcript variant 8	NR_173344.1:n.495T>C	N/A	Non Coding Transcript Variant
ZNF529-AS1 transcript variant 5	NR_173341.1:n.480T>C	N/A	Non Coding Transcript Variant
ZNF529-AS1 transcript variant 1	NR_110703.2:n.	N/A	Intron Variant
ZNF529-AS1 transcript variant 2	NR_110704.2:n.	N/A	Intron Variant
ZNF529-AS1 transcript variant 3	NR_110705.2:n.	N/A	Intron Variant
ZNF529-AS1 transcript variant 9	NR_173345.1:n.	N/A	Intron Variant
ZNF529-AS1 transcript variant 10	NR_173346.1:n.	N/A	Intron Variant
ZNF529-AS1 transcript variant 11	NR_173347.1:n.	N/A	Intron Variant
ZNF529-AS1 transcript variant 12	NR_173348.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	C
GRCh38.p14 chr 19	NC_000019.10:g.36577333=	NC_000019.10:g.36577333T>C
GRCh37.p13 chr 19	NC_000019.9:g.37068235=	NC_000019.9:g.37068235T>C
ZNF529-AS1 transcript variant 4	NR_110706.1:n.729=	NR_110706.1:n.729T>C
ZNF529-AS1 transcript variant 6	NR_173342.1:n.566=	NR_173342.1:n.566T>C
ZNF529-AS1 transcript variant 8	NR_173344.1:n.495=	NR_173344.1:n.495T>C
ZNF529-AS1 transcript variant 5	NR_173341.1:n.480=	NR_173341.1:n.480T>C
ZNF529-AS1 transcript variant 7	NR_173343.1:n.450=	NR_173343.1:n.450T>C
ZNF529 transcript variant 1	NM_001145649.1:c.-46-4941=	NM_001145649.1:c.-46-4941A>G
ZNF529 transcript variant 1	NM_001145649.2:c.-46-4941=	NM_001145649.2:c.-46-4941A>G
ZNF529 transcript variant 3	NM_001145650.1:c.-41+12282=	NM_001145650.1:c.-41+12282A>G
ZNF529 transcript variant 3	NM_001145650.2:c.-41+12282=	NM_001145650.2:c.-41+12282A>G
ZNF529 transcript variant X2	XM_011527164.4:c.-46-4941=	XM_011527164.4:c.-46-4941A>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

119 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss4349545	Mar 26, 2002 (103)
2	ABI	ss44163488	Mar 14, 2006 (126)
3	ILLUMINA	ss66809349	Nov 29, 2006 (127)
4	ILLUMINA	ss67290339	Nov 29, 2006 (127)
5	ILLUMINA	ss67693809	Nov 29, 2006 (127)
6	ILLUMINA	ss70768918	May 25, 2008 (130)
7	ILLUMINA	ss71343932	May 16, 2007 (127)
8	ILLUMINA	ss75831282	Dec 06, 2007 (129)
9	ILLUMINA	ss79158387	Dec 15, 2007 (130)
10	KRIBB_YJKIM	ss84148927	Dec 15, 2007 (130)
11	BCMHGSC_JDW	ss90966024	Mar 24, 2008 (129)
12	HUMANGENOME_JCVI	ss96304389	Feb 05, 2009 (130)
13	1000GENOMES	ss111352187	Jan 25, 2009 (130)
14	ILLUMINA	ss122170485	Dec 01, 2009 (131)
15	ENSEMBL	ss132759824	Dec 01, 2009 (131)
16	ENSEMBL	ss137664481	Dec 01, 2009 (131)
17	ILLUMINA	ss154253990	Dec 01, 2009 (131)
18	ILLUMINA	ss159430785	Dec 01, 2009 (131)
19	ILLUMINA	ss160610918	Dec 01, 2009 (131)
20	COMPLETE_GENOMICS	ss168167314	Jul 04, 2010 (132)
21	ILLUMINA	ss171539573	Jul 04, 2010 (132)
22	ILLUMINA	ss173562758	Jul 04, 2010 (132)
23	1000GENOMES	ss228130645	Jul 14, 2010 (132)
24	1000GENOMES	ss237670426	Jul 15, 2010 (132)
25	1000GENOMES	ss243877486	Jul 15, 2010 (132)
26	GMI	ss283201270	May 04, 2012 (137)
27	GMI	ss287380017	Apr 25, 2013 (138)
28	PJP	ss292246527	May 09, 2011 (134)
29	ILLUMINA	ss480753400	May 04, 2012 (137)
30	ILLUMINA	ss480769344	May 04, 2012 (137)
31	ILLUMINA	ss481658117	Sep 08, 2015 (146)
32	ILLUMINA	ss485171517	May 04, 2012 (137)
33	CLINSEQ_SNP	ss491765483	May 04, 2012 (137)
34	ILLUMINA	ss537162112	Sep 08, 2015 (146)
35	TISHKOFF	ss565969749	Apr 25, 2013 (138)
36	SSMP	ss661832146	Apr 25, 2013 (138)
37	ILLUMINA	ss778515924	Sep 08, 2015 (146)
38	ILLUMINA	ss783031942	Sep 08, 2015 (146)
39	ILLUMINA	ss783991599	Sep 08, 2015 (146)
40	ILLUMINA	ss825488905	Jul 19, 2016 (147)
41	ILLUMINA	ss832289577	Sep 08, 2015 (146)
42	ILLUMINA	ss832942391	Jul 13, 2019 (153)
43	ILLUMINA	ss833972250	Sep 08, 2015 (146)
44	EVA-GONL	ss994277126	Aug 21, 2014 (142)
45	JMKIDD_LAB	ss1081889013	Aug 21, 2014 (142)
46	1000GENOMES	ss1363078103	Aug 21, 2014 (142)
47	DDI	ss1428397336	Apr 01, 2015 (144)
48	EVA_GENOME_DK	ss1578631954	Apr 01, 2015 (144)
49	EVA_UK10K_ALSPAC	ss1637926194	Apr 01, 2015 (144)
50	EVA_UK10K_TWINSUK	ss1680920227	Apr 01, 2015 (144)
51	EVA_DECODE	ss1698330792	Apr 01, 2015 (144)
52	EVA_MGP	ss1711510987	Apr 01, 2015 (144)
53	EVA_SVP	ss1713661365	Apr 01, 2015 (144)
54	ILLUMINA	ss1752283398	Sep 08, 2015 (146)
55	HAMMER_LAB	ss1809297387	Sep 08, 2015 (146)
56	WEILL_CORNELL_DGM	ss1937771229	Feb 12, 2016 (147)
57	GENOMED	ss1968639801	Jul 19, 2016 (147)
58	JJLAB	ss2029663687	Sep 14, 2016 (149)
59	USC_VALOUEV	ss2158202789	Dec 20, 2016 (150)
60	HUMAN_LONGEVITY	ss2225594356	Dec 20, 2016 (150)
61	SYSTEMSBIOZJU	ss2629329199	Nov 08, 2017 (151)
62	ILLUMINA	ss2633537681	Nov 08, 2017 (151)
63	GRF	ss2702811822	Nov 08, 2017 (151)
64	ILLUMINA	ss2710881755	Nov 08, 2017 (151)
65	GNOMAD	ss2962602942	Nov 08, 2017 (151)
66	SWEGEN	ss3017432577	Nov 08, 2017 (151)
67	BIOINF_KMB_FNS_UNIBA	ss3028664360	Nov 08, 2017 (151)
68	CSHL	ss3352292946	Nov 08, 2017 (151)
69	ILLUMINA	ss3627927328	Oct 12, 2018 (152)
70	ILLUMINA	ss3631509295	Oct 12, 2018 (152)
71	ILLUMINA	ss3633179703	Oct 12, 2018 (152)
72	ILLUMINA	ss3633890041	Oct 12, 2018 (152)
73	ILLUMINA	ss3634733872	Oct 12, 2018 (152)
74	ILLUMINA	ss3635576855	Oct 12, 2018 (152)
75	ILLUMINA	ss3636421731	Oct 12, 2018 (152)
76	ILLUMINA	ss3637328591	Oct 12, 2018 (152)
77	ILLUMINA	ss3638225836	Oct 12, 2018 (152)
78	ILLUMINA	ss3639119425	Oct 12, 2018 (152)
79	ILLUMINA	ss3639570248	Oct 12, 2018 (152)
80	ILLUMINA	ss3640441180	Oct 12, 2018 (152)
81	ILLUMINA	ss3643198902	Oct 12, 2018 (152)
82	URBANLAB	ss3650913080	Oct 12, 2018 (152)
83	EGCUT_WGS	ss3684205779	Jul 13, 2019 (153)
84	EVA_DECODE	ss3702723184	Jul 13, 2019 (153)
85	ACPOP	ss3743019367	Jul 13, 2019 (153)
86	ILLUMINA	ss3745033890	Jul 13, 2019 (153)
87	EVA	ss3756038101	Jul 13, 2019 (153)
88	ILLUMINA	ss3772531038	Jul 13, 2019 (153)
89	KHV_HUMAN_GENOMES	ss3821285570	Jul 13, 2019 (153)
90	EVA	ss3825934291	Apr 27, 2020 (154)
91	EVA	ss3835451443	Apr 27, 2020 (154)
92	HGDP	ss3847599090	Apr 27, 2020 (154)
93	SGDP_PRJ	ss3888169482	Apr 27, 2020 (154)
94	KRGDB	ss3938268370	Apr 27, 2020 (154)
95	KOGIC	ss3981295092	Apr 27, 2020 (154)
96	FSA-LAB	ss3984152723	Apr 26, 2021 (155)
97	EVA	ss3985853803	Apr 26, 2021 (155)
98	EVA	ss3986794158	Apr 26, 2021 (155)
99	EVA	ss4017823666	Apr 26, 2021 (155)
100	TOPMED	ss5074071010	Apr 26, 2021 (155)
101	TOMMO_GENOMICS	ss5227644072	Apr 26, 2021 (155)
102	EVA	ss5237247009	Apr 26, 2021 (155)
103	1000G_HIGH_COVERAGE	ss5307167014	Oct 16, 2022 (156)
104	EVA	ss5315973472	Oct 16, 2022 (156)
105	EVA	ss5434703902	Oct 16, 2022 (156)
106	HUGCELL_USP	ss5499703272	Oct 16, 2022 (156)
107	EVA	ss5512095159	Oct 16, 2022 (156)
108	1000G_HIGH_COVERAGE	ss5612861828	Oct 16, 2022 (156)
109	EVA	ss5624089556	Oct 16, 2022 (156)
110	SANFORD_IMAGENETICS	ss5662347548	Oct 16, 2022 (156)
111	TOMMO_GENOMICS	ss5786240000	Oct 16, 2022 (156)
112	EVA	ss5800008307	Oct 16, 2022 (156)
113	YY_MCH	ss5817580478	Oct 16, 2022 (156)
114	EVA	ss5840518932	Oct 16, 2022 (156)
115	EVA	ss5848490867	Oct 16, 2022 (156)
116	EVA	ss5852280985	Oct 16, 2022 (156)
117	EVA	ss5928018140	Oct 16, 2022 (156)
118	EVA	ss5936573679	Oct 16, 2022 (156)
119	EVA	ss5953762998	Oct 16, 2022 (156)
120	1000Genomes	NC_000019.9 - 37068235	Oct 12, 2018 (152)
121	1000Genomes_30x	NC_000019.10 - 36577333	Oct 16, 2022 (156)
122	The Avon Longitudinal Study of Parents and Children	NC_000019.9 - 37068235	Oct 12, 2018 (152)
123	Genetic variation in the Estonian population	NC_000019.9 - 37068235	Oct 12, 2018 (152)
124	The Danish reference pan genome	NC_000019.9 - 37068235	Apr 27, 2020 (154)
125	gnomAD - Genomes	NC_000019.10 - 36577333	Apr 26, 2021 (155)
126	Genome of the Netherlands Release 5	NC_000019.9 - 37068235	Apr 27, 2020 (154)
127	HGDP-CEPH-db Supplement 1	NC_000019.8 - 41760075	Apr 27, 2020 (154)
128	HapMap	NC_000019.10 - 36577333	Apr 27, 2020 (154)
129	KOREAN population from KRGDB	NC_000019.9 - 37068235	Apr 27, 2020 (154)
130	Korean Genome Project	NC_000019.10 - 36577333	Apr 27, 2020 (154)
131	Medical Genome Project healthy controls from Spanish population	NC_000019.9 - 37068235	Apr 27, 2020 (154)
132	Northern Sweden	NC_000019.9 - 37068235	Jul 13, 2019 (153)
133	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000019.9 - 37068235	Apr 26, 2021 (155)
134	Qatari	NC_000019.9 - 37068235	Apr 27, 2020 (154)
135	SGDP_PRJ	NC_000019.9 - 37068235	Apr 27, 2020 (154)
136	Siberian	NC_000019.9 - 37068235	Apr 27, 2020 (154)
137	8.3KJPN	NC_000019.9 - 37068235	Apr 26, 2021 (155)
138	14KJPN	NC_000019.10 - 36577333	Oct 16, 2022 (156)
139	TopMed	NC_000019.10 - 36577333	Apr 26, 2021 (155)
140	UK 10K study - Twins	NC_000019.9 - 37068235	Oct 12, 2018 (152)
141	A Vietnamese Genetic Variation Database	NC_000019.9 - 37068235	Jul 13, 2019 (153)
142	ALFA	NC_000019.10 - 36577333	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59605382	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
276982, ss90966024, ss111352187, ss168167314, ss283201270, ss287380017, ss292246527, ss480753400, ss491765483, ss825488905, ss1698330792, ss1713661365, ss3639119425, ss3639570248, ss3643198902, ss3847599090	NC_000019.8:41760074:T:C	NC_000019.10:36577332:T:C	(self)
76481987, 42362922, 29944027, 4814759, 18872180, 45445764, 626747, 16304232, 1079730, 19813151, 40186462, 10719143, 85613379, 42362922, 9357978, ss228130645, ss237670426, ss243877486, ss480769344, ss481658117, ss485171517, ss537162112, ss565969749, ss661832146, ss778515924, ss783031942, ss783991599, ss832289577, ss832942391, ss833972250, ss994277126, ss1081889013, ss1363078103, ss1428397336, ss1578631954, ss1637926194, ss1680920227, ss1711510987, ss1752283398, ss1809297387, ss1937771229, ss1968639801, ss2029663687, ss2158202789, ss2629329199, ss2633537681, ss2702811822, ss2710881755, ss2962602942, ss3017432577, ss3352292946, ss3627927328, ss3631509295, ss3633179703, ss3633890041, ss3634733872, ss3635576855, ss3636421731, ss3637328591, ss3638225836, ss3640441180, ss3684205779, ss3743019367, ss3745033890, ss3756038101, ss3772531038, ss3825934291, ss3835451443, ss3888169482, ss3938268370, ss3984152723, ss3985853803, ss3986794158, ss4017823666, ss5227644072, ss5315973472, ss5434703902, ss5512095159, ss5624089556, ss5662347548, ss5800008307, ss5840518932, ss5848490867, ss5936573679, ss5953762998	NC_000019.9:37068234:T:C	NC_000019.10:36577332:T:C	(self)
100387763, 539394183, 1693051, 37673093, 120077104, 289616674, 9080215479, ss2225594356, ss3028664360, ss3650913080, ss3702723184, ss3821285570, ss3981295092, ss5074071010, ss5237247009, ss5307167014, ss5499703272, ss5612861828, ss5786240000, ss5817580478, ss5852280985, ss5928018140	NC_000019.10:36577332:T:C	NC_000019.10:36577332:T:C	(self)
ss4349545, ss44163488, ss66809349, ss67290339, ss67693809, ss70768918, ss71343932, ss75831282, ss79158387, ss84148927, ss96304389, ss122170485, ss132759824, ss137664481, ss154253990, ss159430785, ss160610918, ss171539573, ss173562758	NT_011109.16:9336452:T:C	NC_000019.10:36577332:T:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3108598

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs3108598