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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs205499

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr17:56895040 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.177483 (46978/264690, TOPMED)
A=0.197793 (43547/220164, ALFA)
A=0.195698 (40133/205076, GENOGRAPHIC) (+ 23 more)
A=0.182435 (25561/140110, GnomAD)
A=0.01132 (320/28258, 14KJPN)
A=0.01217 (204/16760, 8.3KJPN)
A=0.1298 (831/6404, 1000G_30x)
A=0.1258 (630/5008, 1000G)
A=0.2036 (912/4480, Estonian)
A=0.1943 (749/3854, ALSPAC)
A=0.1971 (731/3708, TWINSUK)
A=0.0137 (40/2922, KOREAN)
A=0.1372 (286/2084, HGDP_Stanford)
A=0.1206 (228/1890, HapMap)
A=0.0142 (26/1832, Korea1K)
A=0.2077 (236/1136, Daghestan)
A=0.171 (171/998, GoNL)
A=0.016 (13/792, PRJEB37584)
A=0.192 (120/626, Chileans)
A=0.203 (122/600, NorthernSweden)
A=0.282 (61/216, Qatari)
A=0.033 (7/214, Vietnamese)
G=0.440 (66/150, SGDP_PRJ)
A=0.25 (10/40, GENOME_DK)
A=0.44 (16/36, Ancient Sardinia)
G=0.42 (5/12, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
TRIM25 : Intron Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 220164 G=0.802207 A=0.197793
European Sub 190408 G=0.796673 A=0.203327
African Sub 10396 G=0.84561 A=0.15439
African Others Sub 360 G=0.856 A=0.144
African American Sub 10036 G=0.84526 A=0.15474
Asian Sub 792 G=0.992 A=0.008
East Asian Sub 614 G=0.993 A=0.007
Other Asian Sub 178 G=0.989 A=0.011
Latin American 1 Sub 930 G=0.801 A=0.199
Latin American 2 Sub 4994 G=0.8218 A=0.1782
South Asian Sub 5056 G=0.8550 A=0.1450
Other Sub 7588 G=0.8138 A=0.1862


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.822517 A=0.177483
Allele Frequency Aggregator Total Global 220164 G=0.802207 A=0.197793
Allele Frequency Aggregator European Sub 190408 G=0.796673 A=0.203327
Allele Frequency Aggregator African Sub 10396 G=0.84561 A=0.15439
Allele Frequency Aggregator Other Sub 7588 G=0.8138 A=0.1862
Allele Frequency Aggregator South Asian Sub 5056 G=0.8550 A=0.1450
Allele Frequency Aggregator Latin American 2 Sub 4994 G=0.8218 A=0.1782
Allele Frequency Aggregator Latin American 1 Sub 930 G=0.801 A=0.199
Allele Frequency Aggregator Asian Sub 792 G=0.992 A=0.008
Genographic Project Global Study-wide 205076 G=0.804302 A=0.195698
gnomAD - Genomes Global Study-wide 140110 G=0.817565 A=0.182435
gnomAD - Genomes European Sub 75878 G=0.79837 A=0.20163
gnomAD - Genomes African Sub 41980 G=0.84395 A=0.15605
gnomAD - Genomes American Sub 13648 G=0.81983 A=0.18017
gnomAD - Genomes Ashkenazi Jewish Sub 3324 G=0.7560 A=0.2440
gnomAD - Genomes East Asian Sub 3132 G=0.9885 A=0.0115
gnomAD - Genomes Other Sub 2148 G=0.8115 A=0.1885
14KJPN JAPANESE Study-wide 28258 G=0.98868 A=0.01132
8.3KJPN JAPANESE Study-wide 16760 G=0.98783 A=0.01217
1000Genomes_30x Global Study-wide 6404 G=0.8702 A=0.1298
1000Genomes_30x African Sub 1786 G=0.8555 A=0.1445
1000Genomes_30x Europe Sub 1266 G=0.8088 A=0.1912
1000Genomes_30x South Asian Sub 1202 G=0.8968 A=0.1032
1000Genomes_30x East Asian Sub 1170 G=0.9829 A=0.0171
1000Genomes_30x American Sub 980 G=0.809 A=0.191
1000Genomes Global Study-wide 5008 G=0.8742 A=0.1258
1000Genomes African Sub 1322 G=0.8570 A=0.1430
1000Genomes East Asian Sub 1008 G=0.9831 A=0.0169
1000Genomes Europe Sub 1006 G=0.8062 A=0.1938
1000Genomes South Asian Sub 978 G=0.901 A=0.099
1000Genomes American Sub 694 G=0.810 A=0.190
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.7964 A=0.2036
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.8057 A=0.1943
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.8029 A=0.1971
KOREAN population from KRGDB KOREAN Study-wide 2922 G=0.9863 A=0.0137
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 G=0.8628 A=0.1372
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 G=0.981 A=0.019
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 G=0.783 A=0.217
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 G=0.803 A=0.197
HGDP-CEPH-db Supplement 1 Europe Sub 320 G=0.791 A=0.209
HGDP-CEPH-db Supplement 1 Africa Sub 242 G=0.888 A=0.112
HGDP-CEPH-db Supplement 1 America Sub 216 G=0.889 A=0.111
HGDP-CEPH-db Supplement 1 Oceania Sub 72 G=1.00 A=0.00
HapMap Global Study-wide 1890 G=0.8794 A=0.1206
HapMap American Sub 770 G=0.892 A=0.108
HapMap African Sub 690 G=0.836 A=0.164
HapMap Asian Sub 254 G=0.976 A=0.024
HapMap Europe Sub 176 G=0.852 A=0.148
Korean Genome Project KOREAN Study-wide 1832 G=0.9858 A=0.0142
Genome-wide autozygosity in Daghestan Global Study-wide 1136 G=0.7923 A=0.2077
Genome-wide autozygosity in Daghestan Daghestan Sub 628 G=0.798 A=0.202
Genome-wide autozygosity in Daghestan Near_East Sub 144 G=0.778 A=0.222
Genome-wide autozygosity in Daghestan Central Asia Sub 122 G=0.746 A=0.254
Genome-wide autozygosity in Daghestan Europe Sub 108 G=0.750 A=0.250
Genome-wide autozygosity in Daghestan South Asian Sub 98 G=0.87 A=0.13
Genome-wide autozygosity in Daghestan Caucasus Sub 36 G=0.83 A=0.17
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.829 A=0.171
CNV burdens in cranial meningiomas Global Study-wide 792 G=0.984 A=0.016
CNV burdens in cranial meningiomas CRM Sub 792 G=0.984 A=0.016
Chileans Chilean Study-wide 626 G=0.808 A=0.192
Northern Sweden ACPOP Study-wide 600 G=0.797 A=0.203
Qatari Global Study-wide 216 G=0.718 A=0.282
A Vietnamese Genetic Variation Database Global Study-wide 214 G=0.967 A=0.033
SGDP_PRJ Global Study-wide 150 G=0.440 A=0.560
The Danish reference pan genome Danish Study-wide 40 G=0.75 A=0.25
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 36 G=0.56 A=0.44
Siberian Global Study-wide 12 G=0.42 A=0.58
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 17 NC_000017.11:g.56895040G>A
GRCh37.p13 chr 17 NC_000017.10:g.54972401G>A
Gene: TRIM25, tripartite motif containing 25 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
TRIM25 transcript NM_005082.5:c.1363+303C>T N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A
GRCh38.p14 chr 17 NC_000017.11:g.56895040= NC_000017.11:g.56895040G>A
GRCh37.p13 chr 17 NC_000017.10:g.54972401= NC_000017.10:g.54972401G>A
TRIM25 transcript NM_005082.4:c.1363+303= NM_005082.4:c.1363+303C>T
TRIM25 transcript NM_005082.5:c.1363+303= NM_005082.5:c.1363+303C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

113 SubSNP, 26 Frequency submissions
No Submitter Submission ID Date (Build)
1 KWOK ss269391 Jul 12, 2000 (79)
2 KWOK ss1039075 Oct 04, 2000 (86)
3 KWOK ss1830959 Oct 18, 2000 (87)
4 SC_JCM ss3540621 Sep 28, 2001 (100)
5 PERLEGEN ss24586559 Sep 20, 2004 (123)
6 AFFY ss66046044 Dec 01, 2006 (127)
7 ILLUMINA ss66774341 Dec 01, 2006 (127)
8 ILLUMINA ss67220054 Dec 01, 2006 (127)
9 ILLUMINA ss67614236 Dec 01, 2006 (127)
10 PERLEGEN ss69198827 May 17, 2007 (127)
11 ILLUMINA ss70698348 May 25, 2008 (130)
12 ILLUMINA ss71264135 May 17, 2007 (127)
13 ILLUMINA ss75901760 Dec 06, 2007 (129)
14 AFFY ss75945558 Dec 06, 2007 (129)
15 ILLUMINA ss79110882 Dec 15, 2007 (130)
16 KRIBB_YJKIM ss83385556 Dec 15, 2007 (130)
17 1000GENOMES ss113658941 Jan 25, 2009 (130)
18 ILLUMINA ss121902538 Dec 01, 2009 (131)
19 ILLUMINA ss153835233 Dec 01, 2009 (131)
20 ILLUMINA ss159353817 Dec 01, 2009 (131)
21 ILLUMINA ss160495054 Dec 01, 2009 (131)
22 AFFY ss169497303 Jul 04, 2010 (132)
23 COMPLETE_GENOMICS ss169870965 Jul 04, 2010 (132)
24 ILLUMINA ss170982528 Jul 04, 2010 (132)
25 ILLUMINA ss173075095 Jul 04, 2010 (132)
26 BUSHMAN ss202638554 Jul 04, 2010 (132)
27 1000GENOMES ss227593984 Jul 14, 2010 (132)
28 1000GENOMES ss237279088 Jul 15, 2010 (132)
29 1000GENOMES ss243567607 Jul 15, 2010 (132)
30 GMI ss287195682 Apr 25, 2013 (138)
31 ILLUMINA ss480401026 May 04, 2012 (137)
32 ILLUMINA ss480414223 May 04, 2012 (137)
33 ILLUMINA ss481194837 Sep 08, 2015 (146)
34 ILLUMINA ss484998127 May 04, 2012 (137)
35 ILLUMINA ss537030526 Sep 08, 2015 (146)
36 TISHKOFF ss565330443 Apr 25, 2013 (138)
37 SSMP ss661139285 Apr 25, 2013 (138)
38 ILLUMINA ss778852207 Aug 21, 2014 (142)
39 ILLUMINA ss782945363 Aug 21, 2014 (142)
40 ILLUMINA ss783907848 Aug 21, 2014 (142)
41 ILLUMINA ss825441400 Jul 19, 2016 (147)
42 ILLUMINA ss832201136 Apr 01, 2015 (144)
43 ILLUMINA ss832865738 Aug 21, 2014 (142)
44 ILLUMINA ss833456568 Aug 21, 2014 (142)
45 ILLUMINA ss834312873 Aug 21, 2014 (142)
46 EVA-GONL ss993206256 Aug 21, 2014 (142)
47 JMKIDD_LAB ss1081126025 Aug 21, 2014 (142)
48 1000GENOMES ss1359038164 Aug 21, 2014 (142)
49 HAMMER_LAB ss1397732403 Sep 08, 2015 (146)
50 EVA_GENOME_DK ss1578196455 Apr 01, 2015 (144)
51 EVA_UK10K_ALSPAC ss1635845139 Apr 01, 2015 (144)
52 EVA_UK10K_TWINSUK ss1678839172 Apr 01, 2015 (144)
53 EVA_DECODE ss1697252671 Apr 01, 2015 (144)
54 EVA_SVP ss1713589411 Apr 01, 2015 (144)
55 ILLUMINA ss1752231843 Sep 08, 2015 (146)
56 WEILL_CORNELL_DGM ss1936667586 Feb 12, 2016 (147)
57 JJLAB ss2029109435 Sep 14, 2016 (149)
58 USC_VALOUEV ss2157586987 Dec 20, 2016 (150)
59 HUMAN_LONGEVITY ss2217615721 Dec 20, 2016 (150)
60 ILLUMINA ss2633408221 Nov 08, 2017 (151)
61 GRF ss2702148782 Nov 08, 2017 (151)
62 ILLUMINA ss2710854163 Nov 08, 2017 (151)
63 GNOMAD ss2951002083 Nov 08, 2017 (151)
64 SWEGEN ss3015696695 Nov 08, 2017 (151)
65 BIOINF_KMB_FNS_UNIBA ss3028377143 Nov 08, 2017 (151)
66 CSHL ss3351786088 Nov 08, 2017 (151)
67 ILLUMINA ss3627691773 Oct 12, 2018 (152)
68 ILLUMINA ss3631388555 Oct 12, 2018 (152)
69 ILLUMINA ss3633852364 Oct 12, 2018 (152)
70 ILLUMINA ss3634680370 Oct 12, 2018 (152)
71 ILLUMINA ss3635540049 Oct 12, 2018 (152)
72 ILLUMINA ss3636369846 Oct 12, 2018 (152)
73 ILLUMINA ss3637291607 Oct 12, 2018 (152)
74 ILLUMINA ss3638167337 Oct 12, 2018 (152)
75 ILLUMINA ss3639092345 Oct 12, 2018 (152)
76 ILLUMINA ss3639553384 Oct 12, 2018 (152)
77 ILLUMINA ss3640387680 Oct 12, 2018 (152)
78 ILLUMINA ss3643145287 Oct 12, 2018 (152)
79 EGCUT_WGS ss3682574321 Jul 13, 2019 (153)
80 EVA_DECODE ss3700661075 Jul 13, 2019 (153)
81 ACPOP ss3742109459 Jul 13, 2019 (153)
82 ILLUMINA ss3744980638 Jul 13, 2019 (153)
83 EVA ss3754782925 Jul 13, 2019 (153)
84 ILLUMINA ss3772478443 Jul 13, 2019 (153)
85 PACBIO ss3788233841 Jul 13, 2019 (153)
86 PACBIO ss3793186278 Jul 13, 2019 (153)
87 PACBIO ss3798072061 Jul 13, 2019 (153)
88 KHV_HUMAN_GENOMES ss3820048789 Jul 13, 2019 (153)
89 EVA ss3834916022 Apr 27, 2020 (154)
90 EVA ss3841071073 Apr 27, 2020 (154)
91 EVA ss3846568290 Apr 27, 2020 (154)
92 HGDP ss3847566840 Apr 27, 2020 (154)
93 SGDP_PRJ ss3885953244 Apr 27, 2020 (154)
94 KRGDB ss3935678613 Apr 27, 2020 (154)
95 KOGIC ss3979030595 Apr 27, 2020 (154)
96 EVA ss3984724714 Apr 26, 2021 (155)
97 EVA ss3985796369 Apr 26, 2021 (155)
98 EVA ss4017772018 Apr 26, 2021 (155)
99 TOPMED ss5039389241 Apr 26, 2021 (155)
100 TOMMO_GENOMICS ss5222877944 Apr 26, 2021 (155)
101 1000G_HIGH_COVERAGE ss5303476318 Oct 16, 2022 (156)
102 GENOGRAPHIC ss5314572758 Oct 16, 2022 (156)
103 EVA ss5315893178 Oct 16, 2022 (156)
104 EVA ss5428212523 Oct 16, 2022 (156)
105 HUGCELL_USP ss5496488954 Oct 16, 2022 (156)
106 1000G_HIGH_COVERAGE ss5607366130 Oct 16, 2022 (156)
107 SANFORD_IMAGENETICS ss5660294235 Oct 16, 2022 (156)
108 TOMMO_GENOMICS ss5779230006 Oct 16, 2022 (156)
109 EVA ss5799978213 Oct 16, 2022 (156)
110 YY_MCH ss5816621797 Oct 16, 2022 (156)
111 EVA ss5834116333 Oct 16, 2022 (156)
112 EVA ss5914319272 Oct 16, 2022 (156)
113 EVA ss5951687483 Oct 16, 2022 (156)
114 1000Genomes NC_000017.10 - 54972401 Oct 12, 2018 (152)
115 1000Genomes_30x NC_000017.11 - 56895040 Oct 16, 2022 (156)
116 The Avon Longitudinal Study of Parents and Children NC_000017.10 - 54972401 Oct 12, 2018 (152)
117 Chileans NC_000017.10 - 54972401 Apr 27, 2020 (154)
118 Genome-wide autozygosity in Daghestan NC_000017.9 - 52327400 Apr 27, 2020 (154)
119 Genetic variation in the Estonian population NC_000017.10 - 54972401 Oct 12, 2018 (152)
120 Genographic Project NC_000017.11 - 56895040 Oct 16, 2022 (156)
121 The Danish reference pan genome NC_000017.10 - 54972401 Apr 27, 2020 (154)
122 gnomAD - Genomes NC_000017.11 - 56895040 Apr 26, 2021 (155)
123 Genome of the Netherlands Release 5 NC_000017.10 - 54972401 Apr 27, 2020 (154)
124 HGDP-CEPH-db Supplement 1 NC_000017.9 - 52327400 Apr 27, 2020 (154)
125 HapMap NC_000017.11 - 56895040 Apr 27, 2020 (154)
126 KOREAN population from KRGDB NC_000017.10 - 54972401 Apr 27, 2020 (154)
127 Korean Genome Project NC_000017.11 - 56895040 Apr 27, 2020 (154)
128 Northern Sweden NC_000017.10 - 54972401 Jul 13, 2019 (153)
129 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000017.10 - 54972401 Apr 26, 2021 (155)
130 CNV burdens in cranial meningiomas NC_000017.10 - 54972401 Apr 26, 2021 (155)
131 Qatari NC_000017.10 - 54972401 Apr 27, 2020 (154)
132 SGDP_PRJ NC_000017.10 - 54972401 Apr 27, 2020 (154)
133 Siberian NC_000017.10 - 54972401 Apr 27, 2020 (154)
134 8.3KJPN NC_000017.10 - 54972401 Apr 26, 2021 (155)
135 14KJPN NC_000017.11 - 56895040 Oct 16, 2022 (156)
136 TopMed NC_000017.11 - 56895040 Apr 26, 2021 (155)
137 UK 10K study - Twins NC_000017.10 - 54972401 Oct 12, 2018 (152)
138 A Vietnamese Genetic Variation Database NC_000017.10 - 54972401 Jul 13, 2019 (153)
139 ALFA NC_000017.11 - 56895040 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17729421 Oct 08, 2004 (123)
rs60252661 May 25, 2008 (130)
rs117657882 Aug 16, 2010 (132)
rs386555232 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
202256, 244732, ss66046044, ss75945558, ss113658941, ss169497303, ss169870965, ss202638554, ss287195682, ss480401026, ss825441400, ss1397732403, ss1697252671, ss1713589411, ss3639092345, ss3639553384, ss3643145287, ss3847566840 NC_000017.9:52327399:G:A NC_000017.11:56895039:G:A (self)
72294445, 40062505, 183358, 28312569, 4397145, 17853964, 42856007, 15394324, 1022296, 274262, 18709508, 37970224, 10103341, 80847251, 40062505, 8861788, ss227593984, ss237279088, ss243567607, ss480414223, ss481194837, ss484998127, ss537030526, ss565330443, ss661139285, ss778852207, ss782945363, ss783907848, ss832201136, ss832865738, ss833456568, ss834312873, ss993206256, ss1081126025, ss1359038164, ss1578196455, ss1635845139, ss1678839172, ss1752231843, ss1936667586, ss2029109435, ss2157586987, ss2633408221, ss2702148782, ss2710854163, ss2951002083, ss3015696695, ss3351786088, ss3627691773, ss3631388555, ss3633852364, ss3634680370, ss3635540049, ss3636369846, ss3637291607, ss3638167337, ss3640387680, ss3682574321, ss3742109459, ss3744980638, ss3754782925, ss3772478443, ss3788233841, ss3793186278, ss3798072061, ss3834916022, ss3841071073, ss3885953244, ss3935678613, ss3984724714, ss3985796369, ss4017772018, ss5222877944, ss5315893178, ss5428212523, ss5660294235, ss5799978213, ss5834116333, ss5951687483 NC_000017.10:54972400:G:A NC_000017.11:56895039:G:A (self)
94892065, 79018, 510121275, 1505585, 35408596, 113067110, 254934903, 14167585238, ss2217615721, ss3028377143, ss3700661075, ss3820048789, ss3846568290, ss3979030595, ss5039389241, ss5303476318, ss5314572758, ss5496488954, ss5607366130, ss5779230006, ss5816621797, ss5914319272 NC_000017.11:56895039:G:A NC_000017.11:56895039:G:A (self)
ss269391, ss1039075, ss1830959, ss3540621, ss24586559, ss66774341, ss67220054, ss67614236, ss69198827, ss70698348, ss71264135, ss75901760, ss79110882, ss83385556, ss121902538, ss153835233, ss159353817, ss160495054, ss170982528, ss173075095 NT_010783.15:20246552:G:A NC_000017.11:56895039:G:A (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs205499
PMID Title Author Year Journal
23416095 Associations between polymorphisms in the antiviral TRIM genes and measles vaccine immunity. Ovsyannikova IG et al. 2013 Human immunology
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07