NCBI
dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Re-designed RefSNP Report page!
Clean, modern design that makes it easy to find the information that you are looking for. Report any problems by sending us an email.
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Reference SNP (refSNP) Cluster Report: rs1800234                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:89/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqWith1000GenomeData
Citation:PubMedLitVarNEW
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/C/T (FWD)
Allele Origin:
Ancestral Allele:T
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:C=0.0096/1163 (ExAC)
C=0.0170/85 (1000 Genomes)
C=0.0006/8 (GO-ESP)
C=0.0062/784 (TOPMED)
HGVS Names
  • CM000684.2:g.46219983T>A
  • CM000684.2:g.46219983T>C
  • NC_000022.10:g.46615880T>A
  • NC_000022.10:g.46615880T>C
  • NC_000022.11:g.46219983T>A
  • NC_000022.11:g.46219983T>C
  • NG_012204.1:g.74382T>A
  • NG_012204.1:g.74382T>C
  • NM_001001928.2:c.680T>A
  • NM_001001928.2:c.680T>C
  • NM_005036.4:c.680T>A
  • NM_005036.4:c.680T>C
  • NP_001001928.1:p.Val227Ala
  • NP_001001928.1:p.Val227Asp
  • NP_005027.2:p.Val227Ala
  • NP_005027.2:p.Val227Asp
  • XP_005261710.1:p.Val227Ala
  • XP_005261710.1:p.Val227Asp
  • XP_005261711.1:p.Val227Ala
  • XP_005261711.1:p.Val227Asp
  • XP_005261712.1:p.Val227Ala
  • XP_005261712.1:p.Val227Asp
  • XP_005261713.1:p.Val227Ala
  • XP_005261713.1:p.Val227Asp
  • XP_005261714.1:p.Val227Ala
  • XP_005261714.1:p.Val227Asp
  • XP_005261715.1:p.Val227Ala
  • XP_005261715.1:p.Val227Asp
  • XP_006724332.1:p.Val227Ala
  • XP_006724332.1:p.Val227Asp
  • XP_006724333.1:p.Val227Ala
  • XP_006724333.1:p.Val227Asp
  • XP_011528541.1:p.Val227Ala
  • XP_011528541.1:p.Val227Asp
  • XP_011528542.1:p.Val227Ala
  • XP_011528542.1:p.Val227Asp
  • XP_011528543.1:p.Val227Ala
  • XP_011528543.1:p.Val227Asp
  • XP_011528544.1:p.Val227Ala
  • XP_011528544.1:p.Val227Asp
  • XP_011528545.1:p.Val227Ala
  • XP_011528545.1:p.Val227Asp
  • XP_011528546.1:p.Val93Ala
  • XP_011528546.1:p.Val93Asp
  • XP_011528547.1:p.Val93Ala
  • XP_011528547.1:p.Val93Asp
  • XP_016884328.1:p.Val93Ala
  • XP_016884328.1:p.Val93Asp
  • XR_001755253.1:n.1002T>A
  • XR_001755253.1:n.1002T>C
  • XR_244379.1:n.735+1578T>A
  • XR_244379.1:n.735+1578T>C
  • XR_937869.2:n.830+1578T>A
  • XR_937869.2:n.830+1578T>C
  • XR_937870.2:n.826+1582T>A
  • XR_937870.2:n.826+1582T>C
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss283662343 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs1800234 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss2420301HGBASE|SNP000002926fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac11/07/0010/10/0389Genomicunknown
ss28502147IMCJ-GDT|IMCJ-PPARA_2-CTfwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc08/20/0408/20/04126Genomicunknown
ss68074324SHGC|1455fwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaanaatcc11/15/0611/15/06127Genomicunknown
ss69270720PERLEGEN|PGP04752427byFreqfwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc01/30/0708/14/07127Genomicunknown
ss75275799ILLUMINA|ILMN_Human_1M_rs1800234fwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc08/28/0708/29/07129Genomicunknown
ss84167753PHARMGKB_AB_DME|PS206069_PA149848248_301byFreqfwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc12/06/0709/05/14130Genomicunknown
ss105439112SNP500CANCER|PPARA-11byFreqfwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaayaatcc09/05/0809/05/14130Genomicunknown
ss119403907KRIBB_YJKIM|KHS1566154fwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaanaatcc02/04/0902/04/09131Genomicunknown
ss160462780ILLUMINA|HumanOmni1-Quad_v1-0_B_rs1800234-126_T_R_1514248225rev/TA/Gggattgttactggcctttcctgagaggatgcccgggctttgaccttgttcatgttgaagt08/04/0910/02/09131Genomicunknown
ss172924531ILLUMINA|Human1M-Duov3_B_rs1800234-126_T_R_1514248225rev/TA/Gggattgttactggcctttcctgagaggatgcccgggctttgaccttgttcatgttgaagt10/01/0910/02/09132Genomicunknown
ss2442081331000GENOMES|pilot_1_CHB+JPT_6093210_chr22_44994544fwd/C/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc05/01/1005/01/10132Genomicunknown
ss283662343GMI|GMI_AK_SNP_7982766fwd/C/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc12/16/1012/16/10137Genomicunknown
ss342546113NHLBI-ESP|ESP2500-chr22-46615880byFreqfwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc03/25/1109/05/14134Genomicunknown
ss480300305ILLUMINA|HumanOmni2.5-4v1_B_rs1800234-128_B_F_1735669507fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/30/1210/28/16137Genomicunknown
ss480311403ILLUMINA|HumanOmniExpress-12v1_C_rs1800234-131_B_F_1858883963fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/30/1210/27/16137Genomicunknown
ss480739625ILLUMINA|HumanOmni2.5-4v1_D_kgp14999559-0_T_R_1834642944fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/30/1210/28/16137Genomicunknown
ss481066910ILLUMINA|HumanOmni1-Quad_v1-0_C_rs1800234-126_T_R_1514248225fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/30/1208/28/15146Genomicunknown
ss484327111ILLUMINA|HumanOmni2.5-4v1_B_SNP22-44994544-0_T_R_1648129295fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/30/1210/28/16137Genomicunknown
ss484947964ILLUMINA|HumanOmni2.5-4v1_D_rs1800234-131_B_F_1858883963fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/30/1210/28/16137Genomicunknown
ss4911954561000GENOMES|20110521_exome_703254_chr22_46615880fwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc02/10/1202/22/12137Genomicunknown
ss491573277EXOME_CHIP|nonsyn_289503_chr_22_46615880fwd/BC/Tacttcaacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaacaatcc03/05/1203/06/12137Genomicunknown
ss533915833ILLUMINA|HumanOmni5-4v1_B_kgp14999559-0_T_R_1834642944fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac06/22/1208/29/15146Genomicunknown
ss662620361SSMP|22_46615880fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac12/14/1202/14/15138Genomicunknown
ss779088236ILLUMINA|HumanOmni25Exome-8v1_A_kgp14999559-0_T_R_1834642944fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/30/1307/10/15146Genomicunknown
ss780763744ILLUMINA|HumanOmni25Exome-8v1_A_exm1617749-0_T_R_1919052956fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/30/1307/10/15146Genomicunknown
ss781306151ILLUMINA|HumanOmni2.5-4v1_H_kgp14999559-0_T_R_1834642944fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/30/1307/29/15146Genomicunknown
ss782920290ILLUMINA|HumanOmni2.5-4v1_H_rs1800234-131_B_F_1858883963fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/30/1307/29/15142Genomicunknown
ss783442905ILLUMINA|HumanOmniExpressExome-8v1_A_exm1617749-0_T_R_1919052956fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/31/1306/19/15146Genomicunknown
ss783883328ILLUMINA|HumanOmniExpressExome-8v1_A_rs1800234-131_B_F_1894986633fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/31/1306/19/15142Genomicunknown
ss832175414ILLUMINA|HumanOmniExpress-12v1_H_rs1800234-131_B_F_1858883963fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac09/17/1306/18/15144Genomicunknown
ss833923520ILLUMINA|HumanOmni2.5-8v1_A_rs1800234-131_B_F_1865419896fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac09/18/1307/29/15142Genomicunknown
ss834552077ILLUMINA|HumanOmni2.5-8v1_A_kgp14999559-0_T_R_1834642944fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac09/18/1307/29/15146Genomicunknown
ss1067607644JMKIDD_LAB|HGDP_exomes_chr22_46615880fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac07/09/1407/09/14142Genomicunknown
ss1082713377JMKIDD_LAB|HGDP_WGS_chr22_46615880fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac07/10/1407/12/14142Genomicunknown
ss13674728011000GENOMES|PHASE3_V1_81377393fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac08/16/1408/16/14142Genomicunknown
ss1640154899EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_22_46615880_44825887fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/04/1503/04/15144Genomicunknown
ss1683148932EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_22_46615880_44825887fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/04/1503/04/15144Genomicunknown
ss1694401710EVA_EXAC|EVA_EXAC_9894994fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/04/1503/04/15144Genomicunknown
ss1694401711EVA_EXAC|EVA_EXAC_9894995fwd/A/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/04/1503/04/15144Genomicunknown
ss1699501746EVA_DECODE|EVA_DECODE_22_44994544_234041_rs1800234fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/02/1503/05/15144Genomicunknown
ss1711573476EVA_MGP|EVA_XIMO_689236fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/09/1503/09/15144Genomicunknown
ss1713746769EVA_SVP|EVA_SVP_1440848fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/12/1503/12/15144Genomicunknown
ss1752425275ILLUMINA|OmniExpressExome-8v1-1_B_exm1617749-0_T_R_1919052956fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/27/1506/09/15146Genomicunknown
ss1752425276ILLUMINA|OmniExpressExome-8v1-1_B_rs1800234-131_B_F_1894986633fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/27/1506/09/15146Genomicunknown
ss1917957228ILLUMINA|HumanExome-12v1-1_B_exm1617749-0_T_R_1919052956fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac10/16/1510/16/15147Genomicunknown
ss1939001081WEILL_CORNELL_DGM|SNV:chr22:46615880fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac10/16/1510/19/15147Genomicunknown
ss1946598838ILLUMINA|HumanCoreExome-12v1-0_C_exm1617749-0_T_R_1919052956fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac10/29/1510/29/15147Genomicunknown
ss1959988274ILLUMINA|exm1617749-0_T_R_1919052956fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac11/13/1511/13/15147Genomicunknown
ss1966654640AMU|chr22_46615880fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac01/29/1601/29/16147Genomicunknown
ss1969286981GENOMED|rs1800234fwd/BC/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac02/16/1602/16/16147Genomicunknown
ss2158895857USC_VALOUEV|NC_000022.10:g.46615880T>Cfwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac11/17/1611/17/16150Genomicunknown
ss2247958721HUMAN_LONGEVITY|HLI-22-46219983-T-Cfwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac11/18/1611/18/16150Genomicunknown
ss2414969314TOPMED|22_46615880_T/Cfwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac11/19/1611/19/16150Genomicunknown
ss2633889784ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_SoL-kgp14999559-0_T_R_2131fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac02/02/1702/02/17151Genomicunknown
ss2633889785ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_kgp14999559-0_T_R_18346429fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac02/02/1702/02/17151Genomicunknown
ss2633889786ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs1800234-131_B_F_18949866fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac02/02/1702/02/17151Genomicunknown
ss2704648825GRF|rs1800234fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac02/13/1702/13/17151Genomicunknown
ss2710961062ILLUMINA|Consortium-OncoArray_15047405_A_rs1800234-131_B_F_1910760968fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac03/22/1703/22/17151Genomicunknown
ss2745224922GNOMAD|exomes_rs1800234fwd/A/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/17/1705/17/17151Genomicunknown
ss2750582875GNOMAD|coding_rs1800234fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/17/1705/17/17151Genomicunknown
ss2975277394GNOMAD|rs1800234fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/23/1705/23/17151Genomicunknown
ss2985241993AFFY|Axiom_PsorMich_Affx-19751289fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/24/1705/24/17151Genomicunknown
ss2985859544AFFY|Axiom_Smokesc1_Affx-19751289fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/24/1705/24/17151Genomicunknown
ss3019432836SWEGEN|NC_000022.10:g.46615880T>Cfwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac05/30/1705/30/17151Genomicunknown
ss3379207856TOPMED|TOPMed_freeze_5?chr22:46,219,983fwd/C/Taacatgaacaaggtcaaagcccgggcatcctctcaggaaaggccagtaac10/03/1710/03/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs1800234|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/C/T'|mol=Genomic|build=151
 CCCCGTTCAC CTCCTTCACT CAAAGGTTGA TGATGCACCT GATAGTGGTG TGCACCCTAC
 TAATGAGACG AACGATGGTG TCACCTTCAG CCTGCACCTG TTAACGATGG TGTCACCTTC
 AGCCTGCACC TGTTTAAACA TCTACAGTGT ATGGAGTTTG AGTTTTTCAT CTCTCCATAG
 TGGAAAGCCG AATAGTAATG AAGGATGGGT CTGAACTGCC TGTGAATTTT CATTCCTGGT
 TTAAAGTCCT GGGGGAGCCC CTCGTCCAGC CCTGTCCGCG CAGTCATGAC CTCACTGCTC
 ATGCCTGTGT TTCCCCCTCC AAACCCTAGC GATTCGTTTT GGACGAATGC CAAGATCTGA
 GAAAGCAAAA CTGAAAGCAG AAATTCTTAC CTGTGAACAT GACATAGAAG ATTCTGAAAC
 TGCAGATCTC AAATCTCTGG CCAAGAGAAT CTACGAGGCC TACTTGAAGA ACTTCAACAT
 GAACAAGGTC AAAGCCCGGG
 H
 CATCCTCTCA GGAAAGGCCA GTAACAATCC AGTAGGTGTT TGCGGCTGTT CTGGGTTCTC
 TTGGCAACAT GGAACCAGTG TCGTAGAGGA CGATTAAGGA CACATGTGTT GAATGTTGAG
 AAAATTATAT TTATCCCACA GTTAAGCAAA GGACAGCGAA GATGGAAACA GTTCATTCTG
 AGACTCTGAG CTGTAGCTTA ACAACAACTC CTTTCTTCTT GCTTGGAGCC ACCTCAAAGC
 TCTTAGCAAC TAAGTTATTA TACTGGCTAT GTAATTAATA CACTTAAAAA AAACCTTAAT
 AGCTTACCAA GTACTAAGAT GATTTCTTAG GAGCATTTTT TCTTAAATAG AGATAGGTTC
 TTGCTCTGTT GCCCAGGCTG GAATGCAGTG GTGCAATCAT AGTTCACTGC AGCCTTGAAC
 TCCTGGGCTC AAGCAATCCT CCTGCCTCAG CCTCCCAAGG AGCTGGGACT ACAGGTGTGC
 ACCACCACAC CTGGCTATGT

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
Z79997
dbSNP Blast Analysis
3D structure mapping
NP_001001928  NP_005027  

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceC/C
C/T
T/T
HWPA
C
T
ss105439112P1 204GF 0.019607840.980392161.00000000 0.009803920.99019605
CAUC1 62GF 1.00000000 1.00000000
AFR1 48GF 1.00000000 1.00000000
HISP1 46GF 0.043478260.956521751.00000000 0.021739130.97826087
PAC1 48GF 0.041666670.958333311.00000000 0.020833330.97916669
P2 416GF0.004807690.033653850.961538430.00499800 0.021634620.97836536
CAUC2 120GF 1.00000000 1.00000000
AFR2 120GF 1.00000000 1.00000000
P3 550GF0.007272730.025454550.967272700.00100000 0.020000000.98000002
CAUC3 130GF 1.00000000 1.00000000
AFR3 148GF 1.00000000 1.00000000
HISP3 98GF0.040816330.102040820.857142870.01002800 0.091836740.90816325
PAC3 174GF 0.022988510.977011501.00000000 0.011494250.98850572
ASI2 176GF0.011363640.079545450.909090940.09972100 0.051136360.94886363
ss1367472801EAS 1008AF 0.042700000.95729995
EUR 1006AF 0.001000000.99900001
AFR 1322AF 1.00000000
AMR 694AF 0.057600000.94239998
SAS 978AF 0.001000000.99899995
ss1694401710ExAc_Aggregated_Populations121411AF 0.009579030.99042094
ss1694401711ExAc_Aggregated_Populations120249AF 0.00000832 0.99999166
ss244208133pilot_1_CHB+JPT_low_coverage_panel 120AF 0.066666670.93333334
ss342546113ESP_Cohort_Populations 4538GF 0.001762890.998237131.00000000 0.000881450.99911857
ss68074324R24 48AF 0.020000000.98000002
ENSEMBL_Watson 2IG 1.00000000 1.00000000
ss69270720HapMap-CEUEuropean 120IG 1.00000000 1.00000000
HapMap-HCBAsian 90IG0.022222220.088888890.888888900.09972100 0.066666670.93333334
HapMap-JPTAsian 90IG0.022222220.066666670.911111120.02002200 0.055555560.94444442
HapMap-YRISub-Saharan African 120IG 1.00000000 1.00000000
ss84167753PA149848249 356AF 0.016853930.98314607

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
0.019+/-0.0960000

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqWith1000GenomeDataUNKNOWNUNKNOWNUNKNOWN

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement