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Reference SNP (refSNP) Cluster Report: rs1322048                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:88/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitWith1000GenomeData
Citation:PubMedLitVarNEW
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/G (REV)
Allele Origin:
Ancestral Allele:G
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:T=0.3389/1697 (1000 Genomes)
T=0.3870/48597 (TOPMED)
HGVS Names
  • CM000671.2:g.27232750C>T
  • NC_000009.11:g.27232748C>T
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss280165792 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs1322048 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss2091036TSC-CSHL|TSC0802633byFreqfwd/TA/Ggtgtctcaccagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct10/19/0004/07/0488Genomic95 %
ss6088969SC_JCM|NT_023974.12_8624855rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac01/10/0310/10/03111Genomicunknown
ss22824258SSAHASNP|WGSA-200403-chr9.chr9.NT_008413.16_27222748rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac03/21/0403/21/04121Genomicunknown
ss43744794ABI|hCV1295101byFreqrev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac07/18/0511/03/06126Genomicunknown
ss66552568ILLUMINA|HumanHap300v1.1_rs1322048fwd/TA/Ggtgtctcaccagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct11/09/0611/09/06127Genomicunknown
ss67065371ILLUMINA|HumanHap550v1.1_rs1322048fwd/TA/Ggtgtctcaccagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct11/14/0611/14/06127Genomicunknown
ss67393721ILLUMINA|HumanHap650Yv1.0_rs1322048fwd/TA/Ggtgtctcaccagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct11/14/0611/14/06127Genomicunknown
ss69287672PERLEGEN|PGP06760679byFreqrev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac01/30/0708/14/07127Genomicunknown
ss70420903ILLUMINA|HumanHap300v2.0_rs1322048fwd/TA/Ggtgtctcaacagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct04/18/0711/18/07127Genomicunknown
ss70598232ILLUMINA|HumanHap550v3.0__rs1322048rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac04/20/0703/30/08130Genomicunknown
ss71142942ILLUMINA|HumanHap650Yv3.0_rs1322048fwd/TA/Ggtgtctcaacagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct04/23/0704/23/07127Genomicunknown
ss75488677ILLUMINA|ILMN_Human_1M_rs1322048fwd/TA/Ggtgtctcaacagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct08/28/0708/29/07129Genomicunknown
ss83718356KRIBB_YJKIM|KHS526871fwd/TA/Ggtgtctcaacagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct12/04/0712/05/07130Genomicunknown
ss94035095BCMHGSC_JDW|JWB-2577757rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac02/26/0803/05/08129Genomicunknown
ss97790048HUMANGENOME_JCVI|1103652056761rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac03/30/0803/30/08130Genomicunknown
ss1087019481000GENOMES|CEU.trio.12.15.2008_2159905_chr9_27222748rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac12/16/0812/16/08130Genomicunknown
ss1143545801000GENOMES|NA19240_2008_12_16_1952605_chr9_27222748rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac12/18/0812/18/08130Genomicunknown
ss121628757ILLUMINA|HumanCNV370v1_C_rs1322048fwd/TA/Ggtgtctcaacagcaaccacttctgggggtagggtttttagggatgtgcatttccttttct04/14/0904/14/09131Genomicunknown
ss134170298ENSEMBL|ENSSNP2973561rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac12/08/0810/15/09131Genomicunknown
ss144038495ENSEMBL|ENSSNP13624377rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac06/05/0906/06/09131Genomicunknown
ss153337227ILLUMINA|Human610_Quadv1_B_rs1322048-128_B_R_1501654364rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac06/18/0906/19/09131Genomicunknown
ss157349129GMI|GMI_SNP_130915629rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac06/24/0906/25/09131Genomicunknown
ss159249376ILLUMINA|Human660W-Quad_v1_A_rs1322048-128_B_R_1501654364rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac07/06/0907/06/09131Genomicunknown
ss160324080ILLUMINA|HumanOmni1-Quad_v1-0_B_rs1322048-128_B_R_1501654364rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac08/04/0910/02/09131Genomicunknown
ss164857277COMPLETE_GENOMICS|NA19240_36_chr9_27222748rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac09/29/0909/30/09132Genomicunknown
ss170320600ILLUMINA|HumanCNV370-Quadv3_C_rs1322048-128_B_R_1501654364rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac10/01/0910/03/09132Genomicunknown
ss172357870ILLUMINA|Human1M-Duov3_B_rs1322048-128_B_R_1501654364rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac10/01/0910/02/09132Genomicunknown
ss200272107BUSHMAN|BUSHMAN-chr9-27222747rev/BC/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac02/16/1003/07/10132Genomicunknown
ss2241978661000GENOMES|pilot_1_YRI_6007549_chr9_27222748rev/C/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac04/22/1004/22/10132Genomicunknown
ss2347800181000GENOMES|pilot_1_CEU_4384647_chr9_27222748rev/C/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac05/01/1005/01/10132Genomicunknown
ss2415621501000GENOMES|pilot_1_CHB+JPT_3447227_chr9_27222748rev/C/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac05/01/1005/01/10132Genomicunknown
ss280165792GMI|GMI_AK_SNP_4486065rev/C/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac12/16/1012/16/10137Genomicunknown
ss285994611GMI|GMI_NA10851_SNP_2007384rev/C/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac12/17/1012/17/10138Genomicunknown
ss294424761PJP|SNP_3931119_chr9_27222748rev/C/Tagaaaaggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttgagacac01/21/1101/21/11134Genomicunknown
ss479890171ILLUMINA|HumanOmni2.5-4v1_B_rs1322048-128_B_R_1767948247rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga01/30/1210/29/16137Genomicunknown
ss479898153ILLUMINA|HumanOmniExpress-12v1_C_rs1322048-131_B_R_1857529205rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga01/30/1210/27/16137Genomicunknown
ss480512970ILLUMINA|HumanOmni1-Quad_v1-0_C_rs1322048-131_B_R_1865336691rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga01/30/1208/28/15146Genomicunknown
ss484743563ILLUMINA|HumanOmni2.5-4v1_D_rs1322048-131_B_R_1857529205rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga01/30/1210/28/16137Genomicunknown
ss536839534ILLUMINA|HumanOmni5-4v1_B_rs1322048-131_B_R_1891278617rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga06/22/1208/29/15146Genomicunknown
ss561329748TISHKOFF|snp_chr9_27232748rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga11/22/1211/23/12138Genomicunknown
ss655765726SSMP|9_27232748rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga12/14/1202/12/15138Genomicunknown
ss778423188ILLUMINA|HumanOmni25Exome-8v1_A_rs1322048-131_B_R_1865336691rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga05/30/1307/10/15146Genomicunknown
ss782818469ILLUMINA|HumanOmni2.5-4v1_H_rs1322048-131_B_R_1857529205rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga05/30/1307/29/15142Genomicunknown
ss783783591ILLUMINA|HumanOmniExpressExome-8v1_A_rs1322048-131_B_R_1891278617rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga05/31/1306/19/15146Genomicunknown
ss825390177ILLUMINA|HumanCNV370v1_C_rs1322048-126_B_R_IFB1136523958:0rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga06/24/1311/21/14144Genomicunknown
ss832071794ILLUMINA|HumanOmniExpress-12v1_H_rs1322048-131_B_R_1857529205rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga09/17/1306/19/15144Genomicunknown
ss832761648ILLUMINA|Human660W-Quad_v1_C_rs1322048-131_B_R_1857529205rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga09/18/1307/02/15142Genomicunknown
ss833352478ILLUMINA|Human660W-Quad_v1_H_rs1322048-131_B_R_1857529205rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga09/18/1307/02/15142Genomicunknown
ss833878570ILLUMINA|HumanOmni2.5-8v1_A_rs1322048-131_B_R_1865336691rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga09/18/1307/29/15146Genomicunknown
ss986459851EVA-GONL|EVA-GONL_rs1322048rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga04/23/1404/25/14142Genomicunknown
ss1076229139JMKIDD_LAB|HGDP_WGS_chr9_27232748rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga07/10/1407/11/14142Genomicunknown
ss13334755201000GENOMES|PHASE3_V1_45963135rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga08/16/1408/16/14142Genomicunknown
ss1397553204HAMMER_LAB|HAMMER_LAB_rs1322048rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga09/30/1409/30/14146Genomicunknown
ss1431794453DDI|DDI_rs1322048rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga11/04/1411/05/14144Genomicunknown
ss1583046079EVA_GENOME_DK|EVA_GENOME_DK_snv_rs1322048rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga02/19/1502/20/15144Genomicunknown
ss1596094887EVA_DECODE|EVA_DECODE_9_27222748_271507_rs1322048rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga03/02/1503/03/15144Genomicunknown
ss1622548860EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_9_27232748_25430225rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga03/04/1503/04/15144Genomicunknown
ss1665542893EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_9_27232748_25430225rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga03/04/1503/04/15144Genomicunknown
ss1713101990EVA_SVP|EVA_SVP_796357rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga03/12/1503/12/15144Genomicunknown
ss1752773541ILLUMINA|OmniExpressExome-8v1-1_B_rs1322048-131_B_R_1891278617rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga05/27/1506/09/15146Genomicunknown
ss1805942777HAMMER_LAB|Hsieh_4958938rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga07/15/1507/16/15146Genomicunknown
ss1929743885WEILL_CORNELL_DGM|SNV:chr9:27232748rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga10/16/1510/17/15147Genomicunknown
ss1946256060ILLUMINA|HumanCoreExome-12v1-0_C_rs1322048-131_B_R_1891278617rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga10/29/1510/29/15147Genomicunknown
ss1959175813ILLUMINA|rs1322048-131_B_R_1891278617rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga11/13/1511/13/15147Genomicunknown
ss1971188177GENOMED|rs1322048rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga02/16/1602/16/16147Genomicunknown
ss2025583324JJLAB|SNP6085879rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga08/29/1608/30/16149Genomicunknown
ss2095220721ILLUMINA|InfiniumImmunoArray-24v2-0_A_rs1322048-138_B_R_2276398019rev/BC/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga09/27/1609/27/16150Genomicunknown
ss2153808910USC_VALOUEV|NC_000009.11:g.27232748C>Trev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga11/17/1611/17/16150Genomicunknown
ss2310579572HUMAN_LONGEVITY|HLI-9-27232750-C-Trev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga11/18/1611/18/16150Genomicunknown
ss2480674761TOPMED|9_27232748_C/Trev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga11/20/1611/20/16150Genomicunknown
ss2634855208ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs1322048-131_B_R_18912786rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga02/02/1702/02/17151Genomicunknown
ss2709615199GRF|rs1322048rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga02/13/1702/13/17151Genomicunknown
ss2711160976ILLUMINA|Consortium-OncoArray_15047405_A_rs1322048-131_B_R_1891278617rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga03/22/1703/22/17151Genomicunknown
ss2877030921GNOMAD|rs1322048rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga05/19/1705/19/17151Genomicunknown
ss3004605051SWEGEN|NC_000009.11:g.27232748C>Trev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga05/30/1705/30/17151Genomicunknown
ss3022920330ILLUMINA|MEGA_Consortium_v2_15070954_A2_rs1322048-138_B_R_2276398019rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga06/28/1706/28/17151Genomicunknown
ss3026580189BIOINF_KMB_FNS_UNIBA|9.27232750C>Trev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga07/05/1707/05/17151Genomicunknown
ss3348588485CSHL|rs1322048rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga10/02/1710/02/17151Genomicunknown
ss3585741835TOPMED|TOPMed_freeze_5?chr9:27,232,750rev/C/Taggaaatgcacatccctaaaaaccctacccccagaagtggttgctgttga10/07/1710/07/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs1322048|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=151
 CCACAGATGC TCTGGAGCGG CTGGTAGAGA CAAGAATGGG AGCACAGACA CGCACAGTGT
 TAGAGAAGCT CCAGAGTCAG GGCAGGGCCT CGTTCTCTAT GGTGACTGAG CTGTTGGCTT
 GAGGCACAAG CACCCTGTCT GTCATGTTGG TAGCAGCTTT GGGCTACAAA TGCTTGTGAA
 GTAGCCAGGG AACCAAGAAT GGAAGCACAG GTATACACAG AGTTAGCATG GCTCTAGGGT
 TAGGATGGAG CCTAGTTATC CATGCGGCTG AACTGGTGTG TAGAGTATGG ACTCTAGGGC
 CCAGGGTACA AACTAGCTCA CTATGGCAGT CGCTACAGTG TCTGAGACGA GGGTGGGCCC
 AATGCAGCCA CAGAGCCTGA GACTGGAGCT TGTGGGCTCT TATGAAGTGG CTGCAGCCCC
 AAGATTGAGG TATGTACAGG GTTAGAAGAA ATGGTGGCTC CTTTCTTAAA GTGTCTCAAC
 AGCAACCACT TCTGGGGGTA
 R
 GGGTTTTTAG GGATGTGCAT TTCCTTTTCT AAGGTTCTCC AGTGGGAATG ACTATCTGAT
 ACCTCAGTGG CAGGAGATGC TGGTATCCTC TGTAAAGCAG GTCACTGTGA CCACAGTAGT
 TCTGCTGTGT GGCTCATACC AAGGCCTCCA CCTTTGTTCG TAGACATCTC CTGGTGTATT
 AAATATGCTG ATCACAATCC TTTCTGTGTG ATTATTCTCC ATTATTGTGC TCCACTGTAT
 TGCTGCATAT CCTATAATGG GCCCTTGCAC TCCCTCTGGG TTGTTTTGGT ATGTGAATAG
 TTGTCTGTGT TTATTTATCT ATTCTTTTTT TTTGTGGGAA GATAAAGACT GGTATCTCCT
 AGTATGCCCT CTTGGTGAAG ACATGCTAGA CCGATATTTC AGTGGCTTTT CATTCATGTT
 TCCATTTAGT TAAGTGTTAT GTGAGCAGCC TTTATTTTGC TCTGTGTCTT TGCTTGAATA
 TGCTGTTGGG AATAAAGAGT

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_023974.12 ABBA01065130
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] Note: rs1322048 allele is reverse to the genome back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA/A
A/G
G/G
HWPA
G
ss1333475520EAS 1008AF 0.149800000.85020000
EUR 1006AF 0.319099990.68090004
AFR 1322AF 0.551400010.44859999
AMR 694AF 0.394800010.60519999
SAS 978AF 0.227000000.77300000
ss134170298ENSEMBL_Venter 2IG 1.00000000 0.500000000.50000000
ss144038495ENSEMBL_Watson 2IG1.00000000 1.00000000
ss164857277YRISub-Saharan African 2IG 1.00000000 0.500000000.50000000
ss200272107BANTU 2IG 1.00000000 0.500000000.50000000
ss2091036SC_12_AAsian 24IG0.166666670.250000000.583333310.200325000.291666660.70833331
SC_12_AAAfrican American 24IG0.166666670.666666690.166666670.250592000.500000000.50000000
SC_12_CEuropean 8IG0.250000000.500000000.25000000 0.500000000.50000000
SC_95_CEuropean 82IG0.121951220.439024390.439024391.000000000.341463420.65853661
ss224197866pilot_1_YRI_low_coverage_panel 118AF 0.593220350.40677965
ss234780018pilot_1_CEU_low_coverage_panel 120AF 0.291666660.70833331
ss241562150pilot_1_CHB+JPT_low_coverage_panel 120AF 0.150000010.85000002
ss43744794HapMap-CEUEuropean 226IG0.070796460.407079640.522123871.000000000.274336280.72566372
HapMap-HCBAsian 86IG0.023255810.209302320.767441870.751830000.127906980.87209302
HapMap-JPTAsian 172IG0.023255810.290697660.686046540.751830000.168604660.83139533
HapMap-YRISub-Saharan African 226IG0.380530980.442477880.176991150.438578000.601769920.39823008
HAPMAP-ASW 98IG0.142857150.591836750.265306120.200325000.438775510.56122446
HAPMAP-CHBAsian 82IG 0.170731710.829268281.000000000.085365850.91463417
HAPMAP-CHD 168IG 0.238095240.761904780.583882000.119047620.88095236
HAPMAP-GIH 176IG0.045454550.375000000.579545440.654721000.232954550.76704544
HAPMAP-LWK 180IG0.177777780.533333360.288888900.479500000.444444450.55555558
HAPMAP-MEX 100IG0.180000010.440000000.380000000.583882000.400000010.60000002
HAPMAP-MKK 286IG0.167832170.475524490.356643351.000000000.405594410.59440559
HAPMAP-TSI 176IG0.113636370.534090940.352272720.250592000.380681810.61931819
ss97790048J. Craig Venter 2IG 1.00000000 0.500000000.50000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
0.448+/-0.1530000

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNP
UNKNOWNUNKNOWNUNKNOWN

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