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Reference SNP (refSNP) Cluster Report: rs13015447                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:121/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqWith1000GenomeData
Citation:PubMedLitVarNEW
Association:NHGRI GWAS PheGenI
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/C (FWD)
Allele Origin:
Ancestral Allele:A
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:C=0.4199/2103 (1000 Genomes)
C=0.3789/47582 (TOPMED)
HGVS Names
  • CM000664.2:g.166521468A>C
  • NC_000002.11:g.167377978A>C
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss276772113 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs13015447 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss21672304SSAHASNP|WGSA-200403-chr2.chr2.NT_005403.14_17587395byFreqfwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact03/20/0410/26/06121Genomicunknown
ss23889910PERLEGEN|afd1368576byFreqfwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact08/10/0409/13/04123Genomicunknown
ss41772093ABI|hCV31614777fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact07/17/0507/17/05126Genomicunknown
ss66799052ILLUMINA|HumanHap300v1.1_rs13015447fwd/BA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact11/09/0611/09/06127Genomicunknown
ss67052444ILLUMINA|HumanHap550v1.1_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact11/14/0611/14/06127Genomicunknown
ss67378856ILLUMINA|HumanHap650Yv1.0_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact11/14/0611/14/06127Genomicunknown
ss70418356ILLUMINA|HumanHap300v2.0_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact04/18/0711/18/07127Genomicunknown
ss70591569ILLUMINA|HumanHap550v3.0__rs13015447rev/BG/Tagtgttgggcatacaactttccctattggacagattctgagttctctgactcttttctct04/20/0703/30/08130Genomicunknown
ss71135322ILLUMINA|HumanHap650Yv3.0_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact04/23/0704/23/07127Genomicunknown
ss75827971ILLUMINA|ILMN_Human_1M_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact08/28/0708/29/07129Genomicunknown
ss85293453KRIBB_YJKIM|KHS952306fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact12/04/0712/08/07130Genomicunknown
ss86087322HGSV|Cor18517_SNV_20070510.chr2_167203485fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact12/06/0712/11/07130Genomicunknown
ss91428570BCMHGSC_JDW|JWB-1337956fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact02/26/0803/01/08129Genomicunknown
ss106136089BGI|BGI_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact09/13/0806/18/09130Genomicunknown
ss1102108501000GENOMES|CEU.trio.12.15.2008_515758_chr2_167086224fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact12/17/0812/17/08130Genomicunknown
ss1112185031000GENOMES|NA19240_2008_12_16_465399_chr2_167086224fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact12/17/0812/17/08130Genomicunknown
ss117957652ILLUMINA-UK|NA18507_000205493_NCBI36.1_chr2_167086224fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact01/19/0901/20/09130Genomic99 %
ss121615167ILLUMINA|HumanCNV370v1_C_rs13015447fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact04/14/0904/14/09131Genomicunknown
ss132867571ENSEMBL|ENSSNP1654302fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact12/08/0810/15/09131Genomicunknown
ss138571790ENSEMBL|ENSSNP6430966fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact05/15/0905/18/09131Genomicunknown
ss153308845ILLUMINA|Human610_Quadv1_B_rs13015447-128_B_R_1501647106rev/BG/Tagtgttgggcatacaactttccctattggacagattctgagttctctgactcttttctct06/18/0906/19/09131Genomicunknown
ss157945446GMI|GMI_SNP_76080104fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact06/24/0906/25/09131Genomicunknown
ss159242154ILLUMINA|Human660W-Quad_v1_A_rs13015447-128_B_R_1501647106rev/BG/Tagtgttgggcatacaactttccctattggacagattctgagttctctgactcttttctct07/06/0907/06/09131Genomicunknown
ss164747858COMPLETE_GENOMICS|NA19240_36_chr2_167086224fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact09/29/0909/30/09132Genomicunknown
ss170274129ILLUMINA|HumanCNV370-Quadv3_C_rs13015447-128_B_R_1501647106rev/BG/Tagtgttgggcatacaactttccctattggacagattctgagttctctgactcttttctct10/01/0910/03/09132Genomicunknown
ss172304331ILLUMINA|Human1M-Duov3_B_rs13015447-128_B_R_1501647106rev/BG/Tagtgttgggcatacaactttccctattggacagattctgagttctctgactcttttctct10/01/0910/02/09132Genomicunknown
ss205685149BCM-HGSC-SUB|BCM_CMT_1011-321620fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact03/15/1003/16/10132Genomicunknown
ss2196353401000GENOMES|pilot_1_YRI_1445023_chr2_167086224fwd/A/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact04/22/1004/22/10132Genomicunknown
ss2314545771000GENOMES|pilot_1_CEU_1059206_chr2_167086224fwd/A/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact05/01/1005/01/10132Genomicunknown
ss2389455021000GENOMES|pilot_1_CHB+JPT_830579_chr2_167086224fwd/A/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact05/01/1005/01/10132Genomicunknown
ss253652200BL|SNP173118_2_167086224fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact08/18/1008/18/10134Genomicunknown
ss276772113GMI|GMI_AK_SNP_1092322fwd/A/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact12/16/1012/16/10137Genomicunknown
ss292418468PJP|SNP_1924826_chr2_167086224fwd/A/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact01/21/1101/21/11134Genomicunknown
ss483873710ILLUMINA|HumanOmni2.5-4v1_D_kgp7246292-0_T_F_1815602669fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca01/30/1210/28/16137Genomicunknown
ss483949572ILLUMINA|HumanOmni2.5-4v1_B_SNP2-167086224-0_T_F_1616198359fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca01/30/1210/28/16137Genomicunknown
ss491326465EXOME_CHIP|.GWAS._42692_chr_2_167377978fwd/TA/Cagagaaaagagtcagagaactcagaatctgtccaatagggaaagttgtatgcccaacact03/05/1203/05/12137Genomicunknown
ss536068976ILLUMINA|HumanOmni5-4v1_B_kgp7246292-0_T_F_1815602669fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca06/22/1208/28/15146Genomicunknown
ss556014169TISHKOFF|snp_chr2_167377978fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca11/22/1211/23/12138Genomicunknown
ss649663667SSMP|2_167377978fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca12/14/1202/10/15138Genomicunknown
ss780440687ILLUMINA|HumanOmni25Exome-8v1_A_kgp7246292-0_T_F_1815602669fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/30/1307/09/15142Genomicunknown
ss780681672ILLUMINA|HumanOmni25Exome-8v1_A_exm-rs13015447-131_B_R_1990479299fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/30/1307/09/15146Genomicunknown
ss782380450ILLUMINA|HumanOmni2.5-4v1_H_kgp7246292-0_T_F_1815602669fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/30/1307/28/15142Genomicunknown
ss783355000ILLUMINA|HumanOmniExpressExome-8v1_A_exm-rs13015447-131_B_R_1990479299fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/31/1306/19/15146Genomicunknown
ss825387630ILLUMINA|HumanCNV370v1_C_rs13015447-126_B_R_IFB1137355224:0fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca06/24/1311/21/14144Genomicunknown
ss835930365ILLUMINA|HumanOmni2.5-8v1_A_kgp7246292-0_T_F_1815602669fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca09/18/1307/28/15142Genomicunknown
ss977606946EVA-GONL|EVA-GONL_rs13015447fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca04/23/1404/23/14142Genomicunknown
ss1069677726JMKIDD_LAB|HGDP_WGS_chr2_167377978fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca07/10/1407/10/14142Genomicunknown
ss13002889991000GENOMES|PHASE3_V1_11398651fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca08/16/1408/16/14142Genomicunknown
ss1428809465DDI|DDI_rs13015447fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca11/04/1411/04/14144Genomicunknown
ss1579183379EVA_GENOME_DK|EVA_GENOME_DK_snv_rs13015447fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca02/19/1502/20/15144Genomicunknown
ss1587044376EVA_DECODE|EVA_DECODE_2_167086224_1246290_rs13015447fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca03/02/1503/03/15144Genomicunknown
ss1605073611EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_2_167377978_6256948fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca03/04/1503/04/15144Genomicunknown
ss1648067644EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_2_167377978_6256948fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca03/04/1503/04/15144Genomicunknown
ss1712506809EVA_SVP|EVA_SVP_201361fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca03/12/1503/12/15144Genomicunknown
ss1752321618ILLUMINA|OmniExpressExome-8v1-1_B_exm-rs13015447-131_B_R_1990479299fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/27/1506/09/15146Genomicunknown
ss1797861622HAMMER_LAB|Hsieh_1201013fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca07/15/1507/15/15146Genomicunknown
ss1917755527ILLUMINA|HumanExome-12v1-1_B_exm-rs13015447-131_B_R_1990479299fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca10/16/1510/16/15147Genomicunknown
ss1920858310WEILL_CORNELL_DGM|SNV:chr2:167377978fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca10/16/1510/16/15147Genomicunknown
ss1946057227ILLUMINA|HumanCoreExome-12v1-0_C_exm-rs13015447-131_B_R_1990479299fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca10/29/1510/29/15147Genomicunknown
ss1958475871ILLUMINA|exm-rs13015447-131_B_R_1990479299fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca11/13/1511/13/15147Genomicunknown
ss1968944704GENOMED|rs13015447fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca02/16/1602/16/16147Genomicunknown
ss2020962759JJLAB|SNP1465314fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca08/29/1608/30/16149Genomicunknown
ss2094807933ILLUMINA|Immuno_BeadChip_11419691_B_rs13015447-131_B_R_1867128667fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca09/27/1609/27/16150Genomicunknown
ss2095102848ILLUMINA|InfiniumImmunoArray-24v2-0_A_rs13015447-131_B_R_1867128667fwd/TA/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca09/27/1609/27/16150Genomicunknown
ss2149027377USC_VALOUEV|NC_000002.11:g.167377978A>Cfwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca11/17/1611/17/16150Genomicunknown
ss2236292951HUMAN_LONGEVITY|HLI-2-166521468-A-Cfwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca11/18/1611/18/16150Genomicunknown
ss2402701107TOPMED|2_167377978_A/Cfwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca11/19/1611/19/16150Genomicunknown
ss2624985501SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV924491fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca01/06/1701/06/17151Genomicunknown
ss2633700339ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_kgp7246292-0_T_F_181560266fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca02/02/1702/02/17151Genomicunknown
ss2633700340ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs13015447-131_B_R_1893185fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca02/02/1702/02/17151Genomicunknown
ss2633700341ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_seq-rs13015447-131_B_R_213fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca02/02/1702/02/17151Genomicunknown
ss2703663333GRF|rs13015447fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca02/13/1702/13/17151Genomicunknown
ss2782423681GNOMAD|rs13015447fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/17/1705/17/17151Genomicunknown
ss2985190516AFFY|Axiom_PsorMich_Affx-18415437fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/24/1705/24/17151Genomicunknown
ss2990807996SWEGEN|NC_000002.11:g.167377978A>Cfwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca05/30/1705/30/17151Genomicunknown
ss3022037019ILLUMINA|MEGA_Consortium_v2_15070954_A2_exm-rs13015447-131_B_R_1990479299fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca06/28/1706/28/17151Genomicunknown
ss3024242126BIOINF_KMB_FNS_UNIBA|2.166521468A>Cfwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca07/05/1707/05/17151Genomicunknown
ss3329365442TOPMED|TOPMed_freeze_5?chr2:166,521,468fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca10/02/1710/02/17151Genomicunknown
ss3344588993CSHL|rs13015447fwd/A/Caaagagtcagagaactcagaatctgtccaatagggaaagttgtatgccca10/02/1710/02/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs13015447|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/C'|mol=Genomic|build=151
 CTTTCATGGG GAAAGTTTTG ATCAATGAGA AGTATGAGAC CAGAGGTAAC CCAAATAAAT
 TCTCTCTCAA TATATATCCT CCTGGTTCGT ACTATTTGAA AAGCAAAAAC TCATCCTTGC
 TACAAAGCTG TGGCCACTTA TTAATGAACT CCTGTAATTC TGTTCTCCCT CACTCCCTTT
 AAAAAAATGA AAAAGAAATC AGAAGCTGAA GGAAGCATAA ACTTATTTGC TTGTGTTTTC
 TGGTGATTGT CGTTCCTCAG ACCTGTTCCC ATGGAATTGC AATCATTAAA AGGCACATAA
 CCTTCTAACT CATATTCTGT TTTCTGTGTA ATTCCACCTA CTACAATGTG GCTGGCTGGC
 TGGCTAATGT TTACATAATT TCAGTCGTAA TGCAAGTTTC AAACGGTGCA GCAGTTTGTT
 CAGCTTCCAC TGAAGGGAGC ATAGAAAGCT ATACTGAAAT ATGCTTCACT AGAGAAAAGA
 GTCAGAGAAC TCAGAATCTG
 M
 TCCAATAGGG AAAGTTGTAT GCCCAACACT GTTTAAAGAC TGCCTGAATA TTGTTAGAGA
 GAGATTTGGA ATTGTGATTG ACAGATACCC CAATTCGGGA CTAGAAACTT TCAAAAGGCA
 ATAGAAAGGA AAATAGAATA ATATGAAAAA TGACATTAAG GCTGCACACC CGCAATCCCA
 GCACTTTGGG AAGCTGAGGT TAGAGGACTG TTTGAGCTCA GGCACTGAGG CTGCAATGAG
 CCATGATTGT GCCACTGTAC CCCAGCTTGG GCAACAGAGT GAGACTTTGT CTCAAAATAA
 TAATAAGAAA ATTATATTAA AAATAAAGTT GAGGCTGGGC ACGGTGGCTC ACGCCTGTAA
 TTCTAGCACT TTGGAAGGCC GAGGAGGGCG GGTCACAAGG TCAAGAGTTC GAGACCAGCC
 TGACCAATTT GGTGAAAACC CGACCCTGCT AAAAAATACA AATATTAGCC TAACGTGGTG
 GTGCGTGCCT GTAGTCCCAG

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_005403
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA
A/A
A/C
C
C/C
HWPA
C
ss117957652YRI 2IG 1.00000000 0.500000000.50000000
ss1300288999EAS 1008AF 0.354200010.64579999
EUR 1006AF 0.570600030.42940000
AFR 1322AF 0.651999950.34799999
AMR 694AF 0.606599990.39339998
SAS 978AF 0.706499990.29350001
ss132867571ENSEMBL_Venter 2IG 1.00000000 1.00000000
ss138571790ENSEMBL_Watson 2IG 1.00000000 1.00000000
ss164747858YRISub-Saharan African 2IG 1.00000000 0.500000000.50000000
ss21672304HapMap-CEUEuropean 226IG 0.451327440.41592920 0.132743360.438578000.659292040.34070796
HapMap-HCBAsian 86IG 0.116279070.41860464 0.465116291.000000000.325581400.67441863
HapMap-JPTAsian 172IG 0.127906980.40697673 0.465116290.479500000.331395360.66860467
HapMap-YRISub-Saharan African 226IG 0.380530980.52212387 0.097345140.200325000.641592920.35840708
CHMJAsian 74IG0.31081080 0.68918920 0.310810800.68918920
HAPMAP-ASW 98IG 0.408163280.48979592 0.102040820.583882000.653061210.34693879
HAPMAP-CHBAsian 82IG 0.048780490.34146342 0.609756111.000000000.219512190.78048778
HAPMAP-CHD 170IG 0.141176480.41176471 0.447058830.402784000.347058830.65294117
HAPMAP-GIH 176IG 0.522727250.40909091 0.068181821.000000000.727272750.27272728
HAPMAP-LWK 180IG 0.422222230.47777778 0.100000000.583882000.661111120.33888888
HAPMAP-MEX 100IG 0.380000000.51999998 0.100000000.371093000.639999990.36000001
HAPMAP-MKK 286IG 0.391608390.46153846 0.146853151.000000000.622377630.37762237
HAPMAP-TSI 176IG 0.340909090.42045453 0.238636360.200325000.551136370.44886363
ss219635340pilot_1_YRI_low_coverage_panel 118AF 0.661016940.33898306
ss231454577pilot_1_CEU_low_coverage_panel 120AF 0.666666690.33333334
ss23889910AFD_EUR_PANELEuropean 48IG 0.458333340.45833334 0.083333340.751830000.687500000.31250000
AFD_AFR_PANELAfrican American 46IG 0.521739130.43478259 0.043478260.583882000.739130440.26086956
AFD_CHN_PANELAsian 48IG 0.083333340.54166669 0.375000000.371093000.354166660.64583331
ss238945502pilot_1_CHB+JPT_low_coverage_panel 120AF 0.324999990.67500001

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.487+/-0.0790000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqWith1000GenomeDataUNKNOWNUNKNOWNUNKNOWN

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