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Reference SNP (refSNP) Cluster Report: rs10924270                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:120/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitWith1000GenomeData
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/G (FWD)
Allele Origin:
Ancestral Allele:G
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:A=0.4962/2485 (1000 Genomes)
A=0.4705/59080 (TOPMED)
HGVS Names
  • CM000663.2:g.245641362A>G
  • NC_000001.10:g.245804664A>G
  • NC_000001.11:g.245641362A>G
  • NG_053061.1:g.491378A>G
  • NM_018012.3:c.2099-4759A>G
  • NM_018012.4:c.2099-4759A>G
  • NT_187516.1:g.335666A>G
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss18071261 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs10924270 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss18071261SC_SNP|SC-CHR1_NA11321-200402.chr1.NT_004836.15_10468028byFreqfwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag02/20/0410/21/04120Genomicunknown
ss18244630SC_SNP|SC-CHR1_NA07340-200402.chr1.NT_004836.15_10468028fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag02/20/0403/04/04120Genomicunknown
ss20450183SSAHASNP|WGSA-200403-chr1.chr1.NT_004836.15_10468028fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag03/18/0403/18/04121Genomicunknown
ss43828465ABI|hCV30808310fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag07/18/0507/18/05126Genomicunknown
ss66550374ILLUMINA|HumanHap300v1.1_rs10924270fwd/BA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag11/09/0611/09/06127Genomicunknown
ss66910333ILLUMINA|HumanHap550v1.1_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag11/14/0611/14/06127Genomicunknown
ss67041308ILLUMINA|HumanHap650Yv1.0_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag11/14/0611/14/06127Genomicunknown
ss70384735ILLUMINA|HumanHap300v2.0_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag04/18/0711/18/07127Genomicunknown
ss70507925ILLUMINA|HumanHap550v3.0__rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag04/20/0703/30/08130Genomicunknown
ss71034833ILLUMINA|HumanHap650Yv3.0_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag04/23/0704/23/07127Genomicunknown
ss75748121ILLUMINA|ILMN_Human_1M_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag08/28/0708/29/07129Genomicunknown
ss85032300KRIBB_YJKIM|KHS880200fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag12/04/0712/08/07130Genomicunknown
ss98018623HUMANGENOME_JCVI|1103675390758fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag03/30/0803/30/08130Genomicunknown
ss106647019BGI|BGI_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag09/16/0806/17/09130Genomicunknown
ss1091215281000GENOMES|CEU.trio.12.15.2008_289767_chr1_243871287fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag12/16/0812/16/08130Genomicunknown
ss121417726ILLUMINA|HumanCNV370v1_C_rs10924270fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag04/14/0904/14/09131Genomicunknown
ss139003812ENSEMBL|ENSSNP194100fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag12/08/0810/16/09131Genomicunknown
ss152876293ILLUMINA|Human610_Quadv1_B_rs10924270-128_T_F_1501619417fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag06/18/0906/19/09131Genomicunknown
ss156542182GMI|GMI_SNP_117679851fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag06/24/0906/25/09131Genomicunknown
ss159153171ILLUMINA|Human660W-Quad_v1_A_rs10924270-128_T_F_1501619417fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag07/06/0907/06/09131Genomicunknown
ss159939026ILLUMINA|HumanOmni1-Quad_v1-0_B_rs10924270-128_T_F_1501619417fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag08/04/0910/01/09131Genomicunknown
ss165952587COMPLETE_GENOMICS|NA07022_36_chr1_243871287fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag09/28/0909/30/09132Genomicunknown
ss167592183COMPLETE_GENOMICS|NA20431_36_chr1_243871287fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag09/30/0909/30/09132Genomicunknown
ss169713179ILLUMINA|HumanCNV370-Quadv3_C_rs10924270-128_T_F_1501619417fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag10/01/0910/02/09132Genomicunknown
ss170758458ILLUMINA|Human1M-Duov3_B_rs10924270-128_T_F_1501619417fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag10/01/0910/01/09132Genomicunknown
ss199882019BUSHMAN|BUSHMAN-chr1-243871286fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag02/16/1003/06/10132Genomicunknown
ss205083535BCM-HGSC-SUB|BCM_CMT_1011-22422fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag03/15/1003/15/10132Genomicunknown
ss2107894181000GENOMES|YRI.trio.3.2010_115967_chr1_243871287fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag03/29/1003/29/10132Genomicunknown
ss2189971811000GENOMES|pilot_1_YRI_806864_chr1_243871287fwd/A/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag04/22/1004/22/10132Genomicunknown
ss2309884781000GENOMES|pilot_1_CEU_593107_chr1_243871287fwd/A/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag05/01/1005/01/10132Genomicunknown
ss2385853711000GENOMES|pilot_1_CHB+JPT_470448_chr1_243871287fwd/A/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag05/01/1005/01/10132Genomicunknown
ss253940814BL|SNP239901_1_243871287fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag08/18/1008/19/10134Genomicunknown
ss276303518GMI|GMI_AK_SNP_623685fwd/A/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag12/16/1012/16/10137Genomicunknown
ss284267664GMI|GMI_NA10851_SNP_280430fwd/A/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag12/17/1012/17/10138Genomicunknown
ss290778213PJP|SNP_284571_chr1_243871287fwd/A/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag01/21/1101/21/11134Genomicunknown
ss479405464ILLUMINA|HumanOmni2.5-4v1_B_rs10924270-128_T_F_1768760991fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg01/30/1210/28/16137Genomicunknown
ss479408778ILLUMINA|HumanOmniExpress-12v1_C_rs10924270-131_T_F_1857181973fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg01/30/1210/27/16137Genomicunknown
ss479822181ILLUMINA|HumanOmni1-Quad_v1-0_C_rs10924270-131_T_F_1865610463fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg01/30/1208/28/15146Genomicunknown
ss484502673ILLUMINA|HumanOmni2.5-4v1_D_rs10924270-131_T_F_1857181973fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg01/30/1210/27/16137Genomicunknown
ss491313576EXOME_CHIP|.GWAS._29803_chr_1_245804664fwd/TA/Ggatcggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttggaaag03/05/1203/05/12137Genomicunknown
ss536653738ILLUMINA|HumanOmni5-4v1_B_rs10924270-131_T_F_1885469903fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg06/22/1208/28/15146Genomicunknown
ss555276885TISHKOFF|snp_chr1_245804664fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg11/22/1211/23/12138Genomicunknown
ss648852443SSMP|1_245804664fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg12/14/1202/10/15138Genomicunknown
ss778370793ILLUMINA|HumanOmni25Exome-8v1_A_rs10924270-131_T_F_1865610463fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/30/1307/09/15142Genomicunknown
ss780680809ILLUMINA|HumanOmni25Exome-8v1_A_exm-rs10924270-131_T_F_1990487351fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/30/1307/09/15142Genomicunknown
ss782697894ILLUMINA|HumanOmni2.5-4v1_H_rs10924270-131_T_F_1857181973fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/30/1307/28/15142Genomicunknown
ss783354100ILLUMINA|HumanOmniExpressExome-8v1_A_exm-rs10924270-131_T_F_1990487351fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/31/1306/18/15142Genomicunknown
ss783665984ILLUMINA|HumanOmniExpressExome-8v1_A_rs10924270-131_T_F_1885469903fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/31/1306/18/15142Genomicunknown
ss825354225ILLUMINA|HumanCNV370v1_C_rs10924270-126_T_F_IFB1136521843:0fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg06/24/1311/21/14144Genomicunknown
ss831948985ILLUMINA|HumanOmniExpress-12v1_H_rs10924270-131_T_F_1857181973fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg09/17/1306/18/15144Genomicunknown
ss832665785ILLUMINA|Human660W-Quad_v1_C_rs10924270-131_T_F_1857181973fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg09/18/1307/02/15142Genomicunknown
ss833256474ILLUMINA|Human660W-Quad_v1_H_rs10924270-131_T_F_1857181973fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg09/18/1307/02/15142Genomicunknown
ss833825664ILLUMINA|HumanOmni2.5-8v1_A_rs10924270-131_T_F_1865610463fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg09/18/1307/28/15142Genomicunknown
ss976367389EVA-GONL|EVA-GONL_rs10924270fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg04/23/1404/23/14142Genomicunknown
ss1068770092JMKIDD_LAB|HGDP_WGS_chr1_245804664fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg07/10/1407/10/14142Genomicunknown
ss12954725411000GENOMES|PHASE3_V1_6389966fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg08/16/1408/16/14142Genomicunknown
ss1426178833DDI|DDI_rs10924270fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg11/04/1411/04/14144Genomicunknown
ss1574822621EVA_GENOME_DK|EVA_GENOME_DK_snv_rs10924270fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg02/19/1502/19/15144Genomicunknown
ss1602577243EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_1_245804664_3521572fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg03/04/1503/04/15144Genomicunknown
ss1645571276EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_1_245804664_3521572fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg03/04/1503/04/15144Genomicunknown
ss1712422661EVA_SVP|EVA_SVP_117213fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg03/12/1503/12/15144Genomicunknown
ss1751910977ILLUMINA|OmniExpressExome-8v1-1_B_exm-rs10924270-131_T_F_1990487351fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/27/1506/09/15146Genomicunknown
ss1751910978ILLUMINA|OmniExpressExome-8v1-1_B_rs10924270-131_T_F_1885469903fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/27/1506/09/15146Genomicunknown
ss1796059206HAMMER_LAB|Hsieh_677277fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg07/15/1507/15/15146Genomicunknown
ss1917744838ILLUMINA|HumanExome-12v1-1_B_exm-rs10924270-131_T_F_1990487351fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg10/16/1510/16/15147Genomicunknown
ss1919590791WEILL_CORNELL_DGM|SNV:chr1:245804664fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg10/16/1510/16/15147Genomicunknown
ss1946029392ILLUMINA|HumanCoreExome-12v1-0_C_exm-rs10924270-131_T_F_1990487351fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg10/29/1510/29/15147Genomicunknown
ss1958376891ILLUMINA|exm-rs10924270-131_T_F_1990487351fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg11/13/1511/13/15147Genomicunknown
ss2020323159JJLAB|SNP825714fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg08/29/1608/30/16149Genomicunknown
ss2095003989ILLUMINA|InfiniumImmunoArray-24v2-0_A_rs10924270-138_T_F_2272576350fwd/TA/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg09/27/1609/27/16150Genomicunknown
ss2148362252USC_VALOUEV|NC_000001.10:g.245804664A>Gfwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg11/17/1611/17/16150Genomicunknown
ss2171752314HUMAN_LONGEVITY|HLI-1-245641362-A-Gfwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg11/18/1611/18/16150Genomicunknown
ss2334435547TOPMED|1_245804664_A/Gfwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg11/19/1611/19/16150Genomicunknown
ss2624675509SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV525944fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg01/06/1701/06/17151Genomicunknown
ss2632657998ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_SoL-rs10924270-131_T_F_213fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg02/02/1702/02/17151Genomicunknown
ss2632657999ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs10924270-131_T_F_1885469fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg02/02/1702/02/17151Genomicunknown
ss2632658000ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_seq-rs10924270-131_T_F_213fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg02/02/1702/02/17151Genomicunknown
ss2635009433ILLUMINA|Cancer_BeadChip_11459870_A_rs10924270-128_T_F_1768760991fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg02/02/1702/02/17151Genomicunknown
ss2698368672GRF|rs10924270fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg02/13/1702/13/17151Genomicunknown
ss2768525494GNOMAD|rs10924270fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/17/1705/17/17151Genomicunknown
ss2988794513SWEGEN|NC_000001.10:g.245804664A>Gfwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg05/30/1705/30/17151Genomicunknown
ss3021201604ILLUMINA|MEGA_Consortium_v2_15070954_A2_exm-rs10924270-131_T_F_1990487351fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg06/28/1706/28/17151Genomicunknown
ss3023924365BIOINF_KMB_FNS_UNIBA|1.245641362A>Gfwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg07/05/1707/05/17151Genomicunknown
ss3108673575TOPMED|TOPMed_freeze_5?chr1:245,641,362fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg09/28/1709/28/17151Genomicunknown
ss3344013983CSHL|rs10924270fwd/A/Ggtgacttttgacctttgtgtacctgatatttatatttttctccaggtttg10/02/1710/02/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs10924270|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=151
 TTTGCCTACC TCAAAAATTT TATAGTTGTT ATTTTTAATA GTTTTGTCTT TTAATCTTCT
 TAATAAAATT TTAAATGGTT TAGATGCCAT GATTACAATA TAACAATCAC ATTAGCatta
 tttttcctat gcttttaaga acttctttag catttatcat aggctaggtc tggtagtgat
 acgttttctc tggaaaactc atctctcctt catttctgag gaataactgc ttggtgcagt
 atccttgggg aacatttttt ttttccttca gcactttgaa taatatcatc tcactccctc
 ctgacctgta aaatttctgc tgagaagtct gctgccaggt gtatttgatg tccgttgtat
 gttatttgct tttttcttgc tctctcactg tttttaggac cctctttgcc tttgaccttt
 gtgagtttaa ttataatatg tcttggggtc ttctcacttg ggttgaatct gatcggtgac
 ttttgacctt tgtgtacctg
 R
 atatttatat ttttctccag gtttggaaag ttctgtgtta tttctttgaa taagcttgca
 acttcttgtc tttctcagtt ctctctttaa ttccactaac ccaaatattt gctcttttga
 tgttggtcca taggtcccat aagctttgtt cattccttct tattcttttt tttctcttct
 gactgtctat tttcaaatag tcttgtcttt gagctcactg atcctttctt ctttttgatc
 aattcctctg atacgctcta ttgcattttt catttcattt attgaatttt ttacctccag
 gatttctgtt taattttatt ttttaaatct tttctgtgaa ctttctctga gagatttctg
 tgagctttct tgaagttcac tgagcttcct taaaactgct attttgaatt atttgtctga
 gagatcacat attttcatca ctttagggcc agtcttggtg ccttactttg tccctttgac
 atcatatttc cctgaatgTT

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_004836 ABBA01047168
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA/A
A/G
G/G
HWPA
G
ss1295472541EAS 1008AF 0.565499960.43450001
EUR 1006AF 0.522899990.47709998
AFR 1322AF 0.310100020.68989998
AMR 694AF 0.553300020.44670001
SAS 978AF 0.608399990.39160001
ss139003812ENSEMBL_Venter 2IG 1.00000000 1.00000000
ss165952587CEUEuropean 2IG 1.00000000 1.00000000
ss167592183PGP 2IG 1.00000000 1.00000000
ss18071261HapMap-CEUEuropean 226IG0.336283180.407079640.256637160.099721000.539823000.46017700
HapMap-HCBAsian 86IG0.255813960.511627910.232558151.000000000.511627910.48837209
HapMap-JPTAsian 172IG0.313953490.523255830.162790700.527089000.575581370.42441860
HapMap-YRISub-Saharan African 224IG0.098214280.348214300.553571400.200325000.272321430.72767860
HAPMAP-ASW 98IG0.102040820.408163280.489795921.000000000.306122450.69387758
HAPMAP-CHBAsian 80IG0.349999990.449999990.200000000.654721000.574999990.42500001
HAPMAP-CHD 170IG0.282352950.435294120.282352950.250592000.500000000.50000000
HAPMAP-GIH 172IG0.441860470.430232550.127906980.751830000.656976760.34302327
HAPMAP-LWK 178IG0.078651690.415730330.505617981.000000000.286516850.71348315
HAPMAP-MEX 98IG0.306122450.489795920.204081641.000000000.551020380.44897959
HAPMAP-MKK 284IG0.140845080.464788730.394366201.000000000.373239430.62676054
HAPMAP-TSI 176IG0.215909090.500000000.284090911.000000000.465909090.53409094
ENSEMBL_Watson 2IG1.00000000 1.00000000
ss199882019BANTU 2IG 1.00000000 0.500000000.50000000
ss218997181pilot_1_YRI_low_coverage_panel 118AF 0.271186440.72881359
ss230988478pilot_1_CEU_low_coverage_panel 120AF 0.566666660.43333334
ss238585371pilot_1_CHB+JPT_low_coverage_panel 120AF 0.550000010.44999999
ss98018623J. Craig Venter 2IG 1.00000000 1.00000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.500+/-0.0040000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNP
UNKNOWNUNKNOWNUNKNOWN

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