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Reference SNP (refSNP) Cluster Report: rs7566605                 **Clinical Channel**
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:116/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitwithHapMapFreqWith1000GenomeData
Citation:PubMedLitVarNEW
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:C/G (FWD)
Allele Origin:
Ancestral Allele:G
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:C=0.2859/1432 (1000 Genomes)
C=0.2980/37418 (TOPMED)
HGVS Names
  • CM000664.2:g.118078449C>G
  • NC_000002.11:g.118836025C>G
  • NC_000002.12:g.118078449C>G
  • XR_001739662.1:n.73+9802G>C
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss276638823 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs7566605 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss11450462WI_SSAHASNP|chr2.NT_022135.13_7543767byFreqfwd/TC/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt07/03/0310/25/06116Genomicunknown
ss14877947PERLEGEN|PS00776426byFreqrev/BC/Gaaccaccctggtacagacctaaaggaccacatcaaatatccattgttaagtacttggcag11/13/0304/07/04119Genomicunknown
ss21633044SSAHASNP|WGSA-200403-chr2.chr2.NT_022135.13_7543767fwd/TC/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt03/20/0403/20/04121Genomicunknown
ss23938610PERLEGEN|afd0776426byFreqfwd/TC/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt08/10/0409/13/04123Genomicunknown
ss44147645ABI|hCV29404113byFreqfwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt07/18/0511/03/06126Genomicunknown
ss66003987AFFY|SNP_A-1669246rev/BC/Gccctggtacagacctaaaggaccacatcaaatatccattgttaagtactt10/26/0610/26/06127Genomicunknown
ss66096985AFFY|SNP_A-1964628byFreqrev/BC/Gagacctaaaggaccacatcaaatatccattgt10/27/0603/31/08127Genomicunknown
ss68382656CSHL-HAPMAP|perlegen:assay:24708.776426:1byFreqfwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt01/11/0701/16/07127NAunknown
ss68825460PERLEGEN|PGP00776426byFreqfwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt01/30/0703/31/08127Genomicunknown
ss76058863AFFY|AFFY_6_1M_SNP_A-1964628byFreqrev/C/Gagacctaaaggaccacatcaaatatccattgt08/28/0703/07/10129Genomicunknown
ss77256321HGSV|Cor12156_SNV_20070510.chr2_118552255fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt10/09/0710/12/07129Genomicunknown
ss82448141KRIBB_YJKIM|KHS254819fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt11/30/0712/02/07130Genomicunknown
ss91312313BCMHGSC_JDW|JWB-1294435fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt02/26/0803/01/08129Genomicunknown
ss96420541HUMANGENOME_JCVI|1103658196312fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt03/26/0803/26/08130Genomicunknown
ss103568528BGI|BGI_rs7566605fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt06/06/0806/18/09131Genomicunknown
ss1098153261000GENOMES|CEU.trio.12.15.2008_452417_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt12/16/0812/16/08130Genomicunknown
ss1108022011000GENOMES|NA19240_2008_12_16_411696_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt12/17/0812/17/08130Genomicunknown
ss117842972ILLUMINA-UK|NA18507_000147519_NCBI36.1_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt01/19/0901/20/09130Genomic99 %
ss136181294ENSEMBL|ENSSNP1588766fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt12/08/0810/15/09131Genomicunknown
ss138513693ENSEMBL|ENSSNP5743152fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt05/15/0905/17/09131Genomicunknown
ss157558567GMI|GMI_SNP_46737127fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt06/24/0906/25/09131Genomicunknown
ss160889402ILLUMINA|HumanOmni1-Quad_v1-0_B_rs7566605-128_T_F_1562142243fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt08/04/0910/05/09131Genomicunknown
ss164028542COMPLETE_GENOMICS|NA19240_36_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt09/29/0909/29/09132Genomicunknown
ss172354003AFFY|GenomeWideSNP_5_SNP_A-1964628rev/C/Gagacctaaaggaccacatcaaatatccattgt10/01/0910/02/09132Genomicunknown
ss181835976PAGE_STUDY|PAGE_EAGLE_rs7566605fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt12/14/0912/23/10132Genomicunknown
ss200935774BUSHMAN|BUSHMAN-chr2-118552494fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt02/16/1003/07/10132Genomicunknown
ss205768034BCM-HGSC-SUB|BCM_CMT_1011-362528fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt03/15/1003/16/10132Genomicunknown
ss2194589181000GENOMES|pilot_1_YRI_1268601_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt04/22/1004/22/10132Genomicunknown
ss2313251441000GENOMES|pilot_1_CEU_929773_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt05/01/1005/01/10132Genomicunknown
ss2388423581000GENOMES|pilot_1_CHB+JPT_727435_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt05/01/1005/01/10132Genomicunknown
ss253402808BL|SNP123030_2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt08/18/1008/18/10134Genomicunknown
ss276638823GMI|GMI_AK_SNP_959032fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt12/16/1012/16/10137Genomicunknown
ss284419979GMI|GMI_NA10851_SNP_432750fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt12/17/1012/17/10138Genomicunknown
ss292349495PJP|SNP_1855853_chr2_118552495fwd/C/Gctgccaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccagggtggtt01/21/1101/21/11134Genomicunknown
ss481597732ILLUMINA|HumanOmni2.5-4v1_B_rs7566605-128_T_F_1616888685fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg01/30/1210/28/16137Genomicunknown
ss481627699ILLUMINA|HumanOmniExpress-12v1_C_rs7566605-131_T_F_1858000546fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg01/30/1210/27/16137Genomicunknown
ss482597031ILLUMINA|HumanOmni1-Quad_v1-0_C_rs7566605-131_T_F_1865115758fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg01/30/1208/28/15146Genomicunknown
ss485593789ILLUMINA|HumanOmni2.5-4v1_D_rs7566605-131_T_F_1858000546fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg01/30/1210/28/16137Genomicunknown
ss537483611ILLUMINA|HumanOmni5-4v1_B_rs7566605-131_T_F_1893179016fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg06/22/1208/28/15146Genomicunknown
ss555816332TISHKOFF|snp_chr2_118836025fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg11/22/1211/23/12138Genomicunknown
ss649438113SSMP|2_118836025fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg12/14/1202/10/15138Genomicunknown
ss778718875ILLUMINA|HumanOmni25Exome-8v1_A_rs7566605-131_T_F_1865115758fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg05/30/1307/09/15142Genomicunknown
ss783242481ILLUMINA|HumanOmni2.5-4v1_H_rs7566605-131_T_F_1858000546fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg05/30/1307/28/15142Genomicunknown
ss784196270ILLUMINA|HumanOmniExpressExome-8v1_A_rs7566605-131_T_F_1893179016fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg05/31/1306/19/15142Genomicunknown
ss832503077ILLUMINA|HumanOmniExpress-12v1_H_rs7566605-131_T_F_1858000546fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg09/17/1306/18/15144Genomicunknown
ss834178248ILLUMINA|HumanOmni2.5-8v1_A_rs7566605-131_T_F_1865115758fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg09/18/1307/28/15142Genomicunknown
ss977263052EVA-GONL|EVA-GONL_rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg04/23/1404/23/14142Genomicunknown
ss1069423480JMKIDD_LAB|HGDP_WGS_chr2_118836025fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg07/10/1407/10/14142Genomicunknown
ss12989455791000GENOMES|PHASE3_V1_9999723fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg08/16/1408/16/14142Genomicunknown
ss1428706925DDI|DDI_rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg11/04/1411/04/14144Genomicunknown
ss1579048147EVA_GENOME_DK|EVA_GENOME_DK_snv_rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg02/19/1502/20/15144Genomicunknown
ss1586687539EVA_DECODE|EVA_DECODE_2_118552495_889447_rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg03/02/1503/02/15144Genomicunknown
ss1604375367EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_2_118836025_5489377fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg03/04/1503/04/15144Genomicunknown
ss1647369400EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_2_118836025_5489377fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg03/04/1503/04/15144Genomicunknown
ss1712483971EVA_SVP|EVA_SVP_178523fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg03/12/1503/12/15144Genomicunknown
ss1752307089ILLUMINA|OmniExpressExome-8v1-1_B_rs7566605-131_T_F_1893179016fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg05/27/1506/09/15146Genomicunknown
ss1797358953HAMMER_LAB|Hsieh_1054019fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg07/15/1507/15/15146Genomicunknown
ss1920513339WEILL_CORNELL_DGM|SNV:chr2:118836025fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg10/16/1510/16/15147Genomicunknown
ss1958451506ILLUMINA|2:118836025-C-G-0_T_F_2304287321fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg11/13/1511/13/15147Genomicunknown
ss1968865360GENOMED|rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg02/16/1602/16/16147Genomicunknown
ss2020784313JJLAB|SNP1286868fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg08/29/1608/30/16149Genomicunknown
ss2148840236USC_VALOUEV|NC_000002.11:g.118836025C>Gfwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg11/17/1611/17/16150Genomicunknown
ss2233587097HUMAN_LONGEVITY|HLI-2-118078449-C-Gfwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg11/18/1611/18/16150Genomicunknown
ss2399843946TOPMED|2_118836025_C/Gfwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg11/19/1611/19/16150Genomicunknown
ss2624897790SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV809123fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg01/06/1701/06/17151Genomicunknown
ss2633662400ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs7566605-131_T_F_18931790fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg02/02/1702/02/17151Genomicunknown
ss2703452812GRF|rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg02/13/1702/13/17151Genomicunknown
ss2778571479GNOMAD|rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg05/17/1705/17/17151Genomicunknown
ss2990261397SWEGEN|NC_000002.11:g.118836025C>Gfwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg05/30/1705/30/17151Genomicunknown
ss3022008176ILLUMINA|MEGA_Consortium_v2_15070954_A2_2:118836025-C-G-0_T_F_2304287321fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg06/28/1706/28/17151Genomicunknown
ss3024154046BIOINF_KMB_FNS_UNIBA|2.118078449C>Gfwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg07/05/1707/05/17151Genomicunknown
ss3320511319TOPMED|TOPMed_freeze_5?chr2:118,078,449fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg10/02/1710/02/17151Genomicunknown
ss3344430024CSHL|rs7566605fwd/C/Gaagtacttaacaatggatatttgatgtggtcctttaggtctgtaccaggg10/02/1710/02/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs7566605|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='C/G'|mol=Genomic|build=151
 GGGTATTCCC GCCCCTCTAA GCCACCAGGT ATATACTCGT TTCCCTCTGG AGGAAACTAT
 GAGGACACAG TGTTTTAGAA CAAAACGTTA TGGTCTTCCA TTTCCACAGT TGCCCTTCTA
 TCTCCTGGTC TCTTACTAAG GAGTACAGGG GAACTTTTCA TTATGGTAAT AGGGCTTGTG
 CTCTGAGAAG AGATAATGAG CTTTCTATAT TTTTAATTGG CAAATTGTAT ATGCGTTTTT
 ATTAGCTCAC TATGATCGCT GAGCTGATAT GGGGAAAAAA ATGGAAACAC AAACTCTGAT
 TACATTTATT TCAACCGAGA GATGAAGGAA ACAAAGGTCC AGATTGGGTA CTAACTGGCT
 CAAGGTCACC TAGCTAGTTA GCTGAAGTAC AAGGACTTGA AGTTGATCTA ATGTTCTCTC
 TCCTACCTCC CTCCAATACC CCATCGGAAT TGAAATCATT GCAATAGCCA CTGCCAAGTA
 CTTAACAATG GATATTTGAT
 S
 GTGGTCCTTT AGGTCTGTAC CAGGGTGGTT TTCAGTTTTT TACTTCATCA GCACAGGAAG
 GCAAGGACAT CGCACTGACT CTCATATTTC ATCCTTAGCT CTCGATTCCC TTGGTTTTAC
 ATTTCTGACT CTTCCTTCAG TTTCTTGTAG GGCTTTATGA TTTAATTTAA TTTCAGCTTA
 TGGCTGGCTT TGGTACCCAG AAGAGTGGTA ATTTGTCCTT TAAATTATTC ACCCAGGGGA
 GTCGGTGTTC TTAGAAAACG AGGCGGGGAG AACCTATAAG CTTCATCCCA GCAGAGGGAC
 ATATGACACA CACTGATGCC TCACTCACTT GTTCTTCTCC CACAATACCT TATCTCCCAT
 GTTCAGCCTT GGTTCCTATA ATACCTTGTA TTTCTGCAGA GCTTTTCACA TTAACAAATA
 AAGCAATTTA CAGCATATTT ATACACTGAC TAGTGACTAA TTATACACCT GCAAGCACTG
 CAATCATTCC AGACAAGCAA

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_022135 ABBA01045944
dbSNP Blast Analysis
OMIM
612459

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceC
C/C
C/G
G
G/G
N
HWPC
G
N
ss11450462CHMJAsian 74IG0.40540540 0.58108109 0.01351351 0.405405400.581081090.01351351
ss117842972YRI 2IG 1.00000000 1.00000000
ss1298945579EAS 1008AF 0.353200020.64680004
EUR 1006AF 0.309100000.69090003
AFR 1322AF 0.204200000.79580003
AMR 694AF 0.299700020.70030004
SAS 978AF 0.293500010.70649999
ss136181294ENSEMBL_Venter 2IG 1.00000000 1.00000000
ss138513693ENSEMBL_Watson 2IG 1.00000000 1.00000000
ss14877947AfAmAfrican American 12IG 0.16666667 0.83333331 0.166666670.83333331
CaucasianEuropean 22IG 0.090909090.45454547 0.45454547 1.000000000.318181810.68181819
AsianAsian 12IG 0.83333331 0.16666667 0.416666660.58333331
CEPHEuropean 10IG 0.20000000 0.80000001 0.100000000.89999998
PDpanelGlobal 44IG 0.090909090.27272728 0.63636363 0.317310000.227272730.77272725
ss164028542YRISub-Saharan African 2IG 1.00000000 0.500000000.50000000
ss200935774BANTU 1IG 1.00000000 1.00000000
ss219458918pilot_1_YRI_low_coverage_panel 118AF 0.186440680.81355929
ss231325144pilot_1_CEU_low_coverage_panel 120AF 0.216666670.78333336
ss238842358pilot_1_CHB+JPT_low_coverage_panel 120AF 0.408333330.59166664
ss23938610AFD_EUR_PANELEuropean 48IG 0.54166669 0.45833334 0.250592000.270833340.72916669
AFD_AFR_PANELAfrican American 46IG 0.086956520.30434781 0.60869563 0.438578000.239130440.76086956
AFD_CHN_PANELAsian 48IG 0.166666670.37500000 0.45833334 0.402784000.354166660.64583331
ss44147645HapMap-CEUEuropean 226IG 0.070796460.38938054 0.53982300 1.000000000.265486720.73451328
HapMap-HCBAsian 86IG 0.162790700.39534885 0.44186047 0.371093000.360465110.63953489
HapMap-JPTAsian 172IG 0.104651160.46511629 0.43023255 0.751830000.337209310.66279072
HapMap-YRISub-Saharan African 226IG 0.070796460.31858408 0.61061949 0.294266000.230088500.76991153
HAPMAP-ASW 98IG 0.34693879 0.65306121 0.438578000.173469390.82653064
HAPMAP-CHBAsian 80IG 0.125000000.64999998 0.22499999 0.050043000.449999990.55000001
HAPMAP-CHD 168IG 0.166666670.53571427 0.29761904 0.438578000.434523820.56547618
HAPMAP-GIH 176IG 0.068181820.34090909 0.59090906 0.583882000.238636360.76136363
HAPMAP-LWK 178IG 0.056179780.28089887 0.66292137 0.317310000.196629210.80337077
HAPMAP-MEX 98IG 0.122448980.55102038 0.32653061 0.294266000.397959170.60204083
HAPMAP-MKK 284IG 0.091549290.36619717 0.54225349 0.342782000.274647890.72535211
HAPMAP-TSI 174IG 0.172413800.36781609 0.45977011 0.099721000.356321840.64367819
ss66096985HapMap-CEUEuropean 118IG 0.067796610.40677965 0.52542371 1.000000000.271186440.72881359
HapMap-HCBAsian 90IG 0.155555560.40000001 0.44444445 0.402784000.355555560.64444447
HapMap-JPTAsian 90IG 0.155555560.48888889 0.35555556 1.000000000.400000010.60000002
HapMap-YRISub-Saharan African 120IG 0.083333340.30000001 0.61666667 0.250592000.233333330.76666665
ss68825460HapMap-CEUEuropean 120IG 0.066666670.41666666 0.51666665 0.751830000.275000010.72500002
HapMap-HCBAsian 90IG 0.155555560.40000001 0.44444445 0.402784000.355555560.64444447
HapMap-JPTAsian 90IG 0.155555560.48888889 0.35555556 1.000000000.400000010.60000002
HapMap-YRISub-Saharan African 120IG 0.083333340.30000001 0.61666667 0.250592000.233333330.76666665
ss76058863ICMHP 10IG 0.40000001 0.60000002 0.200000000.80000001
ss96420541J. Craig Venter 2IG 1.00000000 1.00000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
0.408+/-0.1930000

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitwithHapMapFreqWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNP
UNKNOWNUNKNOWNUNKNOWN

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